RNA–Protein interactions for RNA: ENSMUST00000105788.1

Clcnkb-202, Transcript of Chloride channel protein ClC-Kb, mousemouse

TSL 1 (best) BASIC

Gene Clcnkb, Length 2,490 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcnkb-202ENSMUST00000105788 Prr13Q9CQJ5 137 aa9.59□□□□□ -0.87
Clcnkb-202ENSMUST00000105788 Krtap11-1E9Q2E9 183 aa9.58□□□□□ -0.88
Clcnkb-202ENSMUST00000105788 Igkv8-18A0A0B4J1J3 123 aa9.58□□□□□ -0.88
Clcnkb-202ENSMUST00000105788 MifP34884 115 aaKnown RBP9.58□□□□□ -0.88
Clcnkb-202ENSMUST00000105788 Xcl1P47993 114 aa9.58□□□□□ -0.88
Clcnkb-202ENSMUST00000105788 Gm5153P01627 120 aa9.57□□□□□ -0.88
Clcnkb-202ENSMUST00000105788 Tcl1b3P56842 122 aa9.56□□□□□ -0.88
Clcnkb-202ENSMUST00000105788 Igkv8-24A0A140T8P5 121 aa9.55□□□□□ -0.88
Clcnkb-202ENSMUST00000105788 Rpl39lQ9CQD0 51 aa9.55□□□□□ -0.88
Clcnkb-202ENSMUST00000105788 Ighv8-13A0A075B5Y0 101 aa9.54□□□□□ -0.88
Clcnkb-202ENSMUST00000105788 Ighv8-11A0A075B5X4 119 aa9.54□□□□□ -0.88
Clcnkb-202ENSMUST00000105788 Trav3-4A0A075B654 114 aa9.54□□□□□ -0.88
Clcnkb-202ENSMUST00000105788 1810062G17RikG3X8Y2 129 aa9.54□□□□□ -0.88
Clcnkb-202ENSMUST00000105788 Wfdc12Q9JHY3 85 aa9.54□□□□□ -0.88
Clcnkb-202ENSMUST00000105788 PolqQ8CGS6 2544 aa9.53□□□□□ -0.88
Clcnkb-202ENSMUST00000105788 Notch2O35516 2470 aa9.53□□□□□ -0.88
Clcnkb-202ENSMUST00000105788 Gm10518F6UQQ9 182 aa9.53□□□□□ -0.88
Clcnkb-202ENSMUST00000105788 Gm10845Q3UNY9 185 aa9.53□□□□□ -0.88
Clcnkb-202ENSMUST00000105788 Igkv8-16A0A0G2JDG9 121 aa9.53□□□□□ -0.88
Clcnkb-202ENSMUST00000105788 AtrQ9JKK8 2635 aa9.52□□□□□ -0.88
Clcnkb-202ENSMUST00000105788 Igkv3-1A0A075B5P1 119 aa9.52□□□□□ -0.89
Clcnkb-202ENSMUST00000105788 EnhoQ8K1D8 76 aa9.51□□□□□ -0.89
Clcnkb-202ENSMUST00000105788 Gm7102J3QQ10 178 aa9.51□□□□□ -0.89
Clcnkb-202ENSMUST00000105788 BaalcQ8VHV1 145 aa9.5□□□□□ -0.89
Clcnkb-202ENSMUST00000105788 4930556J24RikQ9D4U7 146 aa9.5□□□□□ -0.89
Clcnkb-202ENSMUST00000105788 Ifitm6A0A1B0GS75 124 aa9.49□□□□□ -0.89
Clcnkb-202ENSMUST00000105788 Klk12B2RVZ0 247 aa9.49□□□□□ -0.89
Clcnkb-202ENSMUST00000105788 P01819 144 aa9.49□□□□□ -0.89
Clcnkb-202ENSMUST00000105788 Hbb-b2P02089 147 aa9.49□□□□□ -0.89
Clcnkb-202ENSMUST00000105788 Reg3dQ9QUS9 175 aa9.49□□□□□ -0.89
Clcnkb-202ENSMUST00000105788 Gm11213A0A1B0GR83 88 aa9.49□□□□□ -0.89
Clcnkb-202ENSMUST00000105788 Cox7bP56393 80 aa9.49□□□□□ -0.89
Clcnkb-202ENSMUST00000105788 Tcl1b5P56845 121 aa9.48□□□□□ -0.89
Clcnkb-202ENSMUST00000105788 Snhg11Q4G0K9 87 aa9.48□□□□□ -0.89
Clcnkb-202ENSMUST00000105788 Ighv2-9A0A075B5Q5 116 aa9.47□□□□□ -0.89
Clcnkb-202ENSMUST00000105788 CnbpP53996 178 aaKnown RBP9.47□□□□□ -0.89
Clcnkb-202ENSMUST00000105788 Defa20Q45VN2 95 aa9.47□□□□□ -0.89
Clcnkb-202ENSMUST00000105788 Igkv2-109A0A075B5K6 120 aa9.47□□□□□ -0.89
Clcnkb-202ENSMUST00000105788 Gm7138L7N2C3 230 aa9.47□□□□□ -0.89
Clcnkb-202ENSMUST00000105788 Gm3238W4VSP7 230 aa9.47□□□□□ -0.89
Clcnkb-202ENSMUST00000105788 Gm9903Q8C9Y8 129 aa9.46□□□□□ -0.89
Clcnkb-202ENSMUST00000105788 Ighv13-2A0A0A6YWN3 119 aa9.46□□□□□ -0.9
Clcnkb-202ENSMUST00000105788 Gm10320E9PW43 113 aa9.46□□□□□ -0.9
Clcnkb-202ENSMUST00000105788 SmcpP15265 143 aa9.46□□□□□ -0.9
Clcnkb-202ENSMUST00000105788 E130114P18RikF6S0S7 154 aa9.45□□□□□ -0.9
Clcnkb-202ENSMUST00000105788 Phxr5P08399 672 aa9.45□□□□□ -0.9
Clcnkb-202ENSMUST00000105788 4930519P11RikQ9CUJ8 166 aa9.45□□□□□ -0.9
Clcnkb-202ENSMUST00000105788 Igkv8-34A0A0G2JDU0 121 aa9.45□□□□□ -0.9
Clcnkb-202ENSMUST00000105788 Defa1P11477 93 aa9.45□□□□□ -0.9
Clcnkb-202ENSMUST00000105788 ApcQ61315 2845 aa9.45□□□□□ -0.9
Clcnkb-202ENSMUST00000105788 Rpl18aP62717 176 aaKnown RBP9.44□□□□□ -0.9
Clcnkb-202ENSMUST00000105788 Gm9805F6YK59 57 aa9.44□□□□□ -0.9
Clcnkb-202ENSMUST00000105788 Igkv4-58A0A0G2JGI6 119 aa9.43□□□□□ -0.9
Clcnkb-202ENSMUST00000105788 Ube2d4D3YUH6 135 aa9.43□□□□□ -0.9
Clcnkb-202ENSMUST00000105788 Stab1Q8R4Y4 2571 aa9.43□□□□□ -0.9
Clcnkb-202ENSMUST00000105788 E130208F15RikQ3UPV3 143 aa9.43□□□□□ -0.9
Clcnkb-202ENSMUST00000105788 9230102O04RikA2ASX7 82 aa9.42□□□□□ -0.9
Clcnkb-202ENSMUST00000105788 Reg3bP35230 175 aa9.41□□□□□ -0.9
Clcnkb-202ENSMUST00000105788 Gm10735Q3US96 136 aa9.41□□□□□ -0.9
Clcnkb-202ENSMUST00000105788 Gm17509Q9CZ61 145 aa9.41□□□□□ -0.9
Clcnkb-202ENSMUST00000105788 Q9DAA7 145 aa9.41□□□□□ -0.9
Clcnkb-202ENSMUST00000105788 A0A286YCN5 57 aa9.41□□□□□ -0.9
Clcnkb-202ENSMUST00000105788 Igf1P05017 153 aa9.41□□□□□ -0.9
Clcnkb-202ENSMUST00000105788 Ntn5Q3UQ22 452 aa9.41□□□□□ -0.9
Clcnkb-202ENSMUST00000105788 AY074887Q8R5F9 132 aa9.41□□□□□ -0.9
Clcnkb-202ENSMUST00000105788 Ighv10-3A0A075B5T6 119 aa9.4□□□□□ -0.91
Clcnkb-202ENSMUST00000105788 A730009L09RikA0A1B0GS82 72 aa9.39□□□□□ -0.91
Clcnkb-202ENSMUST00000105788 Kmt2aP55200 3966 aa9.39□□□□□ -0.91
Clcnkb-202ENSMUST00000105788 Ighv10-1A0A0B4J1J6 119 aa9.39□□□□□ -0.91
Clcnkb-202ENSMUST00000105788 Ufsp1Q9CZP0 217 aa9.39□□□□□ -0.91
Clcnkb-202ENSMUST00000105788 Cox7b2Q9D2H1 82 aa9.39□□□□□ -0.91
Clcnkb-202ENSMUST00000105788 Hivep1Q03172 2688 aa9.38□□□□□ -0.91
Clcnkb-202ENSMUST00000105788 Igkv4-92A0A0B4J1I2 117 aa9.38□□□□□ -0.91
Clcnkb-202ENSMUST00000105788 E130218I03RikA0A0U1RNU5 63 aa9.38□□□□□ -0.91
Clcnkb-202ENSMUST00000105788 Defa16P50714 93 aa9.38□□□□□ -0.91
Clcnkb-202ENSMUST00000105788 9430015G10RikA2ASP7 199 aa9.37□□□□□ -0.91
Clcnkb-202ENSMUST00000105788 Gm10770F7D043 238 aa9.37□□□□□ -0.91
Clcnkb-202ENSMUST00000105788 Notch1Q01705 2531 aa9.37□□□□□ -0.91
Clcnkb-202ENSMUST00000105788 Srrm2Q8BTI8 2703 aaKnown RBP9.37□□□□□ -0.91
Clcnkb-202ENSMUST00000105788 PkigO70139 76 aa9.36□□□□□ -0.91
Clcnkb-202ENSMUST00000105788 Apoc4Q61268 124 aa9.36□□□□□ -0.91
Clcnkb-202ENSMUST00000105788 4930535I16RikQ9CUI2 172 aa9.36□□□□□ -0.91
Clcnkb-202ENSMUST00000105788 PtprqP0C5E4 2300 aa9.36□□□□□ -0.91
Clcnkb-202ENSMUST00000105788 Igkv8-26A0A075B5N5 123 aa9.36□□□□□ -0.91
Clcnkb-202ENSMUST00000105788 Igkv8-27A0A0G2JF28 120 aa9.36□□□□□ -0.91
Clcnkb-202ENSMUST00000105788 Igkv8-30A0A140T8M3 121 aa9.36□□□□□ -0.91
Clcnkb-202ENSMUST00000105788 Defa25Q5G864 92 aa9.36□□□□□ -0.91
Clcnkb-202ENSMUST00000105788 AplnQ9R0R4 77 aa9.35□□□□□ -0.91
Clcnkb-202ENSMUST00000105788 Msrb1Q9JLC3 116 aa9.34□□□□□ -0.91
Clcnkb-202ENSMUST00000105788 Igkv1-88A0A140T8N1 120 aa9.34□□□□□ -0.91
Clcnkb-202ENSMUST00000105788 Gm17577J3QNF7 156 aa9.34□□□□□ -0.91
Clcnkb-202ENSMUST00000105788 Defa2P28309 93 aa9.34□□□□□ -0.91
Clcnkb-202ENSMUST00000105788 2310034G01RikA0A286YDL3 209 aa9.33□□□□□ -0.92
Clcnkb-202ENSMUST00000105788 Fn1P11276 2477 aaKnown RBP9.33□□□□□ -0.92
Clcnkb-202ENSMUST00000105788 Hist1h4aP62806 103 aaKnown RBP9.33□□□□□ -0.92
Clcnkb-202ENSMUST00000105788 Nsd1O88491 2588 aaKnown RBP9.33□□□□□ -0.92
Clcnkb-202ENSMUST00000105788 Gm36176A0A1W2P8D5 158 aa9.32□□□□□ -0.92
Clcnkb-202ENSMUST00000105788 Camk2n2Q78WH7 79 aa9.32□□□□□ -0.92
Clcnkb-202ENSMUST00000105788 9530053A07RikE9PVG8 2581 aa9.32□□□□□ -0.92
Clcnkb-202ENSMUST00000105788 Ormdl1Q921I0 153 aa9.32□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 53 ms