RNA–Protein interactions for RNA: ENSMUST00000096198.9

Scn8a-202, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 1 (best) BASIC

Gene Scn8a, Length 1,072 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-202ENSMUST00000096198 Q9D727 114 aa4.82□□□□□ -1.64
Scn8a-202ENSMUST00000096198 Sec11aQ9R0P6 179 aa4.82□□□□□ -1.64
Scn8a-202ENSMUST00000096198 Ighv2-9-1A0A075B697 116 aa4.81□□□□□ -1.64
Scn8a-202ENSMUST00000096198 Gm28305F6U473 122 aa4.81□□□□□ -1.64
Scn8a-202ENSMUST00000096198 LeprotO89013 131 aa4.81□□□□□ -1.64
Scn8a-202ENSMUST00000096198 Mt4P47945 62 aa4.81□□□□□ -1.64
Scn8a-202ENSMUST00000096198 Mpv17l2Q8VIK2 200 aa4.81□□□□□ -1.64
Scn8a-202ENSMUST00000096198 Q9DAQ5 155 aa4.81□□□□□ -1.64
Scn8a-202ENSMUST00000096198 Znf414Q9DCK4 299 aa4.81□□□□□ -1.64
Scn8a-202ENSMUST00000096198 Hspb8Q9JK92 196 aa4.81□□□□□ -1.64
Scn8a-202ENSMUST00000096198 Cend1Q9JKC6 149 aa4.81□□□□□ -1.64
Scn8a-202ENSMUST00000096198 Trav9n-4A0A075B631 113 aa4.8□□□□□ -1.64
Scn8a-202ENSMUST00000096198 Ighv13-2A0A0A6YWN3 119 aa4.8□□□□□ -1.64
Scn8a-202ENSMUST00000096198 Brd3osA0A1B0GRB6 84 aa4.8□□□□□ -1.64
Scn8a-202ENSMUST00000096198 Ighv1-61P01749 117 aa4.8□□□□□ -1.64
Scn8a-202ENSMUST00000096198 Gpx1P11352 201 aa4.8□□□□□ -1.64
Scn8a-202ENSMUST00000096198 Znf664Q4VA44 261 aa4.8□□□□□ -1.64
Scn8a-202ENSMUST00000096198 Gatd1Q8BFQ8 220 aa4.8□□□□□ -1.64
Scn8a-202ENSMUST00000096198 Gm5617Q91VN2 117 aa4.8□□□□□ -1.64
Scn8a-202ENSMUST00000096198 Slc25a2Q99ML6 265 aa4.8□□□□□ -1.64
Scn8a-202ENSMUST00000096198 1500009C09RikD3YYW9 81 aa4.79□□□□□ -1.64
Scn8a-202ENSMUST00000096198 Tmem97Q8VD00 176 aa4.79□□□□□ -1.64
Scn8a-202ENSMUST00000096198 9430069I07RikQ9CX21 111 aa4.79□□□□□ -1.64
Scn8a-202ENSMUST00000096198 Ss18l2Q9D174 77 aa4.79□□□□□ -1.64
Scn8a-202ENSMUST00000096198 Trav13-4-dv7A0A075B6C2 110 aa4.78□□□□□ -1.64
Scn8a-202ENSMUST00000096198 Scgb1b10A0A087WPW0 93 aa4.78□□□□□ -1.64
Scn8a-202ENSMUST00000096198 Trav13d-4A0A0G2JFX3 110 aa4.78□□□□□ -1.64
Scn8a-202ENSMUST00000096198 Gm45717A0A1B0GT68 152 aa4.78□□□□□ -1.64
Scn8a-202ENSMUST00000096198 Ndufa1O35683 70 aa4.78□□□□□ -1.64
Scn8a-202ENSMUST00000096198 Pmp2P24526 132 aa4.78□□□□□ -1.64
Scn8a-202ENSMUST00000096198 Defa23Q5G866 93 aa4.78□□□□□ -1.64
Scn8a-202ENSMUST00000096198 Adm2Q7TNK8 150 aa4.78□□□□□ -1.64
Scn8a-202ENSMUST00000096198 SpinklQ8CEK3 90 aa4.78□□□□□ -1.64
Scn8a-202ENSMUST00000096198 Mustn1Q99JI1 82 aa4.78□□□□□ -1.64
Scn8a-202ENSMUST00000096198 Pam16Q9CQV1 125 aa4.78□□□□□ -1.64
Scn8a-202ENSMUST00000096198 Ighv1-62-1A0A075B5U3 116 aa4.77□□□□□ -1.65
Scn8a-202ENSMUST00000096198 Gm4064A0A087WR82 380 aa4.77□□□□□ -1.65
Scn8a-202ENSMUST00000096198 Gm10352B2RWR6 380 aa4.77□□□□□ -1.65
Scn8a-202ENSMUST00000096198 Fam240aJ3QNP9 97 aa4.77□□□□□ -1.65
Scn8a-202ENSMUST00000096198 Rbmy1a1O35698 380 aa4.77□□□□□ -1.65
Scn8a-202ENSMUST00000096198 P01837 106 aa4.77□□□□□ -1.65
Scn8a-202ENSMUST00000096198 Ca1P13634 261 aa4.77□□□□□ -1.65
Scn8a-202ENSMUST00000096198 Fgf6P21658 208 aa4.77□□□□□ -1.65
Scn8a-202ENSMUST00000096198 Foxi2Q3I5G5 311 aa4.77□□□□□ -1.65
Scn8a-202ENSMUST00000096198 Rbmy1bQ60990 380 aa4.77□□□□□ -1.65
Scn8a-202ENSMUST00000096198 Gm5868Q8BJG1 145 aa4.77□□□□□ -1.65
Scn8a-202ENSMUST00000096198 Zfand2aQ9JII7 171 aa4.77□□□□□ -1.65
Scn8a-202ENSMUST00000096198 Ly6hQ9WUC3 139 aa4.77□□□□□ -1.65
Scn8a-202ENSMUST00000096198 Tmem238A9JSM3 176 aa4.76□□□□□ -1.65
Scn8a-202ENSMUST00000096198 P01823 113 aa4.76□□□□□ -1.65
Scn8a-202ENSMUST00000096198 Defa10P50708 93 aa4.76□□□□□ -1.65
Scn8a-202ENSMUST00000096198 Gm10604Q3V0X7 143 aa4.76□□□□□ -1.65
Scn8a-202ENSMUST00000096198 Ndufc2Q9CQ54 120 aa4.76□□□□□ -1.65
Scn8a-202ENSMUST00000096198 Rbm7Q9CQT2 265 aaKnown RBP4.76□□□□□ -1.65
Scn8a-202ENSMUST00000096198 PpdpfQ9CR37 115 aa4.76□□□□□ -1.65
Scn8a-202ENSMUST00000096198 Mfap4Q9D1H9 257 aa4.76□□□□□ -1.65
Scn8a-202ENSMUST00000096198 Fgf23Q9EPC2 251 aa4.76□□□□□ -1.65
Scn8a-202ENSMUST00000096198 Trav8-1A0A075B641 109 aa4.75□□□□□ -1.65
Scn8a-202ENSMUST00000096198 Trav11A0A0B4J1J9 114 aa4.75□□□□□ -1.65
Scn8a-202ENSMUST00000096198 Gm10065F6TJM2 114 aa4.75□□□□□ -1.65
Scn8a-202ENSMUST00000096198 P01896 185 aa4.75□□□□□ -1.65
Scn8a-202ENSMUST00000096198 Bsph2Q0Q236 131 aa4.75□□□□□ -1.65
Scn8a-202ENSMUST00000096198 Ndufa12Q7TMF3 145 aaKnown RBP4.75□□□□□ -1.65
Scn8a-202ENSMUST00000096198 Gm5148Q8BGG2 154 aa4.75□□□□□ -1.65
Scn8a-202ENSMUST00000096198 A330070K13RikQ8CA53 115 aa4.75□□□□□ -1.65
Scn8a-202ENSMUST00000096198 4930556J24RikQ9D4U7 146 aa4.75□□□□□ -1.65
Scn8a-202ENSMUST00000096198 Ighv2-9A0A075B5Q5 116 aa4.74□□□□□ -1.65
Scn8a-202ENSMUST00000096198 Tex54G3UW99 86 aa4.74□□□□□ -1.65
Scn8a-202ENSMUST00000096198 P0C913 63 aa4.74□□□□□ -1.65
Scn8a-202ENSMUST00000096198 Cks1brtQ3UNC9 96 aa4.74□□□□□ -1.65
Scn8a-202ENSMUST00000096198 Trappc1Q5NCF2 145 aa4.74□□□□□ -1.65
Scn8a-202ENSMUST00000096198 Prss58Q8BW11 241 aa4.74□□□□□ -1.65
Scn8a-202ENSMUST00000096198 Krtap19-3Q925H6 87 aa4.74□□□□□ -1.65
Scn8a-202ENSMUST00000096198 Srsf9Q9D0B0 222 aaKnown RBP4.74□□□□□ -1.65
Scn8a-202ENSMUST00000096198 Ighv1-56A0A0A6YXG2 117 aa4.73□□□□□ -1.65
Scn8a-202ENSMUST00000096198 Gm42674D3YUT9 64 aa4.73□□□□□ -1.65
Scn8a-202ENSMUST00000096198 CrxO54751 299 aa4.73□□□□□ -1.65
Scn8a-202ENSMUST00000096198 SrarpQ3ULG3 163 aa4.73□□□□□ -1.65
Scn8a-202ENSMUST00000096198 Defb50Q6TU36 73 aa4.73□□□□□ -1.65
Scn8a-202ENSMUST00000096198 Gm20730A0A075B5J6 119 aa4.72□□□□□ -1.65
Scn8a-202ENSMUST00000096198 Igkv3-12A0A140T8P0 119 aa4.72□□□□□ -1.65
Scn8a-202ENSMUST00000096198 Hbb-bsA8DUK4 147 aa4.72□□□□□ -1.65
Scn8a-202ENSMUST00000096198 Gm10320E9PW43 113 aa4.72□□□□□ -1.65
Scn8a-202ENSMUST00000096198 Scgb1b19F6WYW0 93 aa4.72□□□□□ -1.65
Scn8a-202ENSMUST00000096198 Hbb-b1P02088 147 aa4.72□□□□□ -1.65
Scn8a-202ENSMUST00000096198 Gm9903Q8C9Y8 129 aa4.72□□□□□ -1.65
Scn8a-202ENSMUST00000096198 Scgb1b15A0A087WP50 93 aa4.71□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Igkv4-92A0A0B4J1I2 117 aa4.71□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Iglc1A0A0G2JE99 106 aa4.71□□□□□ -1.66
Scn8a-202ENSMUST00000096198 1700042G07RikB1AUF7 90 aa4.71□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Defa27F2Z403 93 aa4.71□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Gm7102J3QQ10 178 aa4.71□□□□□ -1.66
Scn8a-202ENSMUST00000096198 4930432M17RikQ3V0W9 174 aa4.71□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Tmem86bQ497J1 226 aa4.71□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Prelid3aQ8VE85 172 aa4.71□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Tspo2Q9CRZ8 162 aa4.71□□□□□ -1.66
Scn8a-202ENSMUST00000096198 4930442H23RikQ9D5G7 103 aa4.71□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Gnb1lQ9EQ15 326 aa4.71□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Plac1Q9JI83 173 aa4.71□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Trav4n-4A0A075B615 110 aa4.7□□□□□ -1.66
Retrieved 100 of 22,080 RNA–protein pairs in 51.5 ms