RNA–Protein interactions for RNA: ENSMUST00000034928.11

Tpm1-202, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 5 BASIC

Gene Tpm1, Length 1,824 nt, Biotype protein coding, Subcellular localisation Axon .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-202ENSMUST00000034928 Ighv10-1A0A0B4J1J6 119 aa9.58□□□□□ -0.88
Tpm1-202ENSMUST00000034928 Trav13n-2A0A0G2JF93 110 aa9.58□□□□□ -0.88
Tpm1-202ENSMUST00000034928 CicQ924A2 2510 aa9.58□□□□□ -0.88
Tpm1-202ENSMUST00000034928 Trav13-2A0A075B649 110 aa9.57□□□□□ -0.88
Tpm1-202ENSMUST00000034928 Gm11213A0A1B0GR83 88 aa9.57□□□□□ -0.88
Tpm1-202ENSMUST00000034928 Gm3618D3Z4P5 127 aa9.57□□□□□ -0.88
Tpm1-202ENSMUST00000034928 EnhoQ8K1D8 76 aa9.57□□□□□ -0.88
Tpm1-202ENSMUST00000034928 Ighv10-3A0A075B5T6 119 aa9.56□□□□□ -0.88
Tpm1-202ENSMUST00000034928 Gm10518F6UQQ9 182 aa9.56□□□□□ -0.88
Tpm1-202ENSMUST00000034928 Gm17509Q9CZ61 145 aa9.56□□□□□ -0.88
Tpm1-202ENSMUST00000034928 Setd2E9Q5F9 2537 aa9.56□□□□□ -0.88
Tpm1-202ENSMUST00000034928 Igkv8-16A0A0G2JDG9 121 aa9.56□□□□□ -0.88
Tpm1-202ENSMUST00000034928 Krtap11-1E9Q2E9 183 aa9.56□□□□□ -0.88
Tpm1-202ENSMUST00000034928 Gm5617Q91VN2 117 aa9.56□□□□□ -0.88
Tpm1-202ENSMUST00000034928 Igkv4-92A0A0B4J1I2 117 aa9.55□□□□□ -0.88
Tpm1-202ENSMUST00000034928 Ube2d4D3YUH6 135 aa9.55□□□□□ -0.88
Tpm1-202ENSMUST00000034928 Gm28539A0A087WSL9 92 aa9.54□□□□□ -0.88
Tpm1-202ENSMUST00000034928 9430015G10RikA2ASP7 199 aa9.54□□□□□ -0.88
Tpm1-202ENSMUST00000034928 MifP34884 115 aaKnown RBP9.54□□□□□ -0.88
Tpm1-202ENSMUST00000034928 Reg3dQ9QUS9 175 aa9.54□□□□□ -0.88
Tpm1-202ENSMUST00000034928 E130208F15RikQ3UPV3 143 aa9.54□□□□□ -0.88
Tpm1-202ENSMUST00000034928 4930519P11RikQ9CUJ8 166 aa9.54□□□□□ -0.88
Tpm1-202ENSMUST00000034928 Igkv8-34A0A0G2JDU0 121 aa9.53□□□□□ -0.88
Tpm1-202ENSMUST00000034928 Gm10770F7D043 238 aa9.53□□□□□ -0.88
Tpm1-202ENSMUST00000034928 Igfn1Q3KNY0 2849 aa9.52□□□□□ -0.89
Tpm1-202ENSMUST00000034928 Gm3233E9Q2H5 230 aa9.52□□□□□ -0.89
Tpm1-202ENSMUST00000034928 Prh1P05142 261 aa9.52□□□□□ -0.89
Tpm1-202ENSMUST00000034928 Phxr5P08399 672 aa9.52□□□□□ -0.89
Tpm1-202ENSMUST00000034928 Gm9805F6YK59 57 aa9.52□□□□□ -0.89
Tpm1-202ENSMUST00000034928 Cox7b2Q9D2H1 82 aa9.52□□□□□ -0.89
Tpm1-202ENSMUST00000034928 Gm7102J3QQ10 178 aa9.51□□□□□ -0.89
Tpm1-202ENSMUST00000034928 Snhg11Q4G0K9 87 aa9.51□□□□□ -0.89
Tpm1-202ENSMUST00000034928 Chd9Q8BYH8 2885 aa9.51□□□□□ -0.89
Tpm1-202ENSMUST00000034928 Hist1h4aP62806 103 aaKnown RBP9.5□□□□□ -0.89
Tpm1-202ENSMUST00000034928 Defb10Q8R2I8 73 aa9.5□□□□□ -0.89
Tpm1-202ENSMUST00000034928 AY074887Q8R5F9 132 aa9.5□□□□□ -0.89
Tpm1-202ENSMUST00000034928 Igkv8-26A0A075B5N5 123 aa9.49□□□□□ -0.89
Tpm1-202ENSMUST00000034928 Tmem254aP0DN89 123 aa9.49□□□□□ -0.89
Tpm1-202ENSMUST00000034928 Tmem254bP0DN90 123 aa9.49□□□□□ -0.89
Tpm1-202ENSMUST00000034928 Tmem254cP0DN91 123 aa9.49□□□□□ -0.89
Tpm1-202ENSMUST00000034928 Gm10735Q3US96 136 aa9.49□□□□□ -0.89
Tpm1-202ENSMUST00000034928 Ighv2-5A0A0A6YY69 116 aa9.49□□□□□ -0.89
Tpm1-202ENSMUST00000034928 BC048502Q80Y74 154 aa9.49□□□□□ -0.89
Tpm1-202ENSMUST00000034928 Q9DAA7 145 aa9.49□□□□□ -0.89
Tpm1-202ENSMUST00000034928 Itpr2Q9Z329 2701 aa9.49□□□□□ -0.89
Tpm1-202ENSMUST00000034928 AtrQ9JKK8 2635 aa9.48□□□□□ -0.89
Tpm1-202ENSMUST00000034928 Ormdl1Q921I0 153 aa9.48□□□□□ -0.89
Tpm1-202ENSMUST00000034928 Igf1P05017 153 aa9.47□□□□□ -0.89
Tpm1-202ENSMUST00000034928 Pde6gP09174 87 aa9.47□□□□□ -0.89
Tpm1-202ENSMUST00000034928 Gm10308Q9CVR5 141 aa9.47□□□□□ -0.89
Tpm1-202ENSMUST00000034928 Fbn1Q61554 2873 aaKnown RBP9.47□□□□□ -0.89
Tpm1-202ENSMUST00000034928 Klk12B2RVZ0 247 aa9.47□□□□□ -0.89
Tpm1-202ENSMUST00000034928 Rpl18aP62717 176 aaKnown RBP9.46□□□□□ -0.9
Tpm1-202ENSMUST00000034928 Wfdc12Q9JHY3 85 aa9.45□□□□□ -0.9
Tpm1-202ENSMUST00000034928 CubnQ9JLB4 3623 aa9.45□□□□□ -0.9
Tpm1-202ENSMUST00000034928 Gm16181B0V2H2 73 aa9.45□□□□□ -0.9
Tpm1-202ENSMUST00000034928 Ufsp1Q9CZP0 217 aa9.45□□□□□ -0.9
Tpm1-202ENSMUST00000034928 Igkv2-109A0A075B5K6 120 aa9.44□□□□□ -0.9
Tpm1-202ENSMUST00000034928 Trav14-1A0A0G2JF94 121 aa9.44□□□□□ -0.9
Tpm1-202ENSMUST00000034928 Defa1P11477 93 aa9.43□□□□□ -0.9
Tpm1-202ENSMUST00000034928 Reg3bP35230 175 aa9.43□□□□□ -0.9
Tpm1-202ENSMUST00000034928 Cdk2ap2Q9CPY4 127 aa9.43□□□□□ -0.9
Tpm1-202ENSMUST00000034928 Xirp2Q4U4S6 3784 aa9.43□□□□□ -0.9
Tpm1-202ENSMUST00000034928 Fn1P11276 2477 aaKnown RBP9.43□□□□□ -0.9
Tpm1-202ENSMUST00000034928 Gm10320E9PW43 113 aa9.42□□□□□ -0.9
Tpm1-202ENSMUST00000034928 Ubl5Q9EPV8 73 aa9.42□□□□□ -0.9
Tpm1-202ENSMUST00000034928 Nsd1O88491 2588 aaKnown RBP9.41□□□□□ -0.9
Tpm1-202ENSMUST00000034928 Ighv13-2A0A0A6YWN3 119 aa9.41□□□□□ -0.9
Tpm1-202ENSMUST00000034928 Igkv8-27A0A0G2JF28 120 aa9.41□□□□□ -0.9
Tpm1-202ENSMUST00000034928 Igkv4-58A0A0G2JGI6 119 aa9.41□□□□□ -0.9
Tpm1-202ENSMUST00000034928 Igkv8-30A0A140T8M3 121 aa9.41□□□□□ -0.9
Tpm1-202ENSMUST00000034928 2310034G01RikA0A286YDL3 209 aa9.41□□□□□ -0.9
Tpm1-202ENSMUST00000034928 Apoc4Q61268 124 aa9.41□□□□□ -0.9
Tpm1-202ENSMUST00000034928 9530003J23RikQ8BM26 151 aa9.41□□□□□ -0.9
Tpm1-202ENSMUST00000034928 Sprr4Q8CGN8 76 aa9.41□□□□□ -0.9
Tpm1-202ENSMUST00000034928 PkigO70139 76 aa9.4□□□□□ -0.9
Tpm1-202ENSMUST00000034928 Elof1P60003 83 aa9.4□□□□□ -0.9
Tpm1-202ENSMUST00000034928 Defa25Q5G864 92 aa9.4□□□□□ -0.9
Tpm1-202ENSMUST00000034928 Gm17577J3QNF7 156 aa9.4□□□□□ -0.91
Tpm1-202ENSMUST00000034928 Lamtor3O88653 124 aa9.4□□□□□ -0.91
Tpm1-202ENSMUST00000034928 SmcpP15265 143 aa9.4□□□□□ -0.91
Tpm1-202ENSMUST00000034928 Gm7276Q3TYW4 209 aa9.4□□□□□ -0.91
Tpm1-202ENSMUST00000034928 Camk2n2Q78WH7 79 aa9.4□□□□□ -0.91
Tpm1-202ENSMUST00000034928 Msrb1Q9JLC3 116 aa9.4□□□□□ -0.91
Tpm1-202ENSMUST00000034928 AplnQ9R0R4 77 aa9.4□□□□□ -0.91
Tpm1-202ENSMUST00000034928 Hivep3A2A884 2348 aa9.39□□□□□ -0.91
Tpm1-202ENSMUST00000034928 A730009L09RikA0A1B0GS82 72 aa9.38□□□□□ -0.91
Tpm1-202ENSMUST00000034928 Igkv8-21A0A140T8P7 120 aa9.38□□□□□ -0.91
Tpm1-202ENSMUST00000034928 6430550D23RikE9Q1X6 194 aa9.38□□□□□ -0.91
Tpm1-202ENSMUST00000034928 Rbm3O89086 153 aaKnown RBP9.38□□□□□ -0.91
Tpm1-202ENSMUST00000034928 Defa16P50714 93 aa9.38□□□□□ -0.91
Tpm1-202ENSMUST00000034928 Spata3Q9D9T6 193 aa9.38□□□□□ -0.91
Tpm1-202ENSMUST00000034928 Ighv2-2A0A075B5P8 116 aa9.37□□□□□ -0.91
Tpm1-202ENSMUST00000034928 P01821 116 aa9.37□□□□□ -0.91
Tpm1-202ENSMUST00000034928 Wfdc17Q5SSJ1 76 aa9.36□□□□□ -0.91
Tpm1-202ENSMUST00000034928 Serp2Q6TAW2 65 aa9.35□□□□□ -0.91
Tpm1-202ENSMUST00000034928 E130218I03RikA0A0U1RNU5 63 aa9.35□□□□□ -0.91
Tpm1-202ENSMUST00000034928 Hivep1Q03172 2688 aa9.35□□□□□ -0.91
Tpm1-202ENSMUST00000034928 7530416G11RikJ3QJX6 159 aa9.34□□□□□ -0.91
Tpm1-202ENSMUST00000034928 SvipQ3UZP4 77 aa9.33□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 72.9 ms