RNA–Protein interactions for RNA: ENSMUST00000031628.9

Ptcd1-201, Transcript of Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptcd1, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1-201ENSMUST00000031628 Tenm4Q3UHK6 2771 aa7.5□□□□□ -1.21
Ptcd1-201ENSMUST00000031628 Gm17472A0A075B683 117 aa7.5□□□□□ -1.21
Ptcd1-201ENSMUST00000031628 1700011M02RikB1AX35 88 aa7.5□□□□□ -1.21
Ptcd1-201ENSMUST00000031628 Tfpi2O35536 230 aa7.49□□□□□ -1.21
Ptcd1-201ENSMUST00000031628 P01819 144 aa7.49□□□□□ -1.21
Ptcd1-201ENSMUST00000031628 CnbpP53996 178 aaKnown RBP7.49□□□□□ -1.21
Ptcd1-201ENSMUST00000031628 4930442H23RikQ9D5G7 103 aa7.49□□□□□ -1.21
Ptcd1-201ENSMUST00000031628 Gm9767G3X930 207 aa7.49□□□□□ -1.21
Ptcd1-201ENSMUST00000031628 SelenowP63300 88 aa7.49□□□□□ -1.21
Ptcd1-201ENSMUST00000031628 Ppp1r32Q148A4 427 aa7.49□□□□□ -1.21
Ptcd1-201ENSMUST00000031628 Rnf152Q8BG47 203 aa7.49□□□□□ -1.21
Ptcd1-201ENSMUST00000031628 Defb29Q8BGW9 78 aa7.49□□□□□ -1.21
Ptcd1-201ENSMUST00000031628 CicQ924A2 2510 aa7.49□□□□□ -1.21
Ptcd1-201ENSMUST00000031628 Gm10647E9Q8X0 124 aa7.48□□□□□ -1.21
Ptcd1-201ENSMUST00000031628 Timm17bQ9Z0V7 172 aa7.48□□□□□ -1.21
Ptcd1-201ENSMUST00000031628 P01755 137 aa7.48□□□□□ -1.21
Ptcd1-201ENSMUST00000031628 Leap2Q91V13 76 aa7.48□□□□□ -1.21
Ptcd1-201ENSMUST00000031628 Pla2g1bQ9Z0Y2 146 aa7.48□□□□□ -1.21
Ptcd1-201ENSMUST00000031628 Lst1O08843 95 aa7.48□□□□□ -1.21
Ptcd1-201ENSMUST00000031628 Dnal4Q9DCM4 105 aa7.48□□□□□ -1.21
Ptcd1-201ENSMUST00000031628 Tenm1Q9WTS4 2731 aa7.47□□□□□ -1.21
Ptcd1-201ENSMUST00000031628 Igkv1-35A0A0G2JDE5 120 aa7.47□□□□□ -1.21
Ptcd1-201ENSMUST00000031628 Erdr1J3QMM0 206 aa7.47□□□□□ -1.21
Ptcd1-201ENSMUST00000031628 Pet100P0DJE0 76 aa7.47□□□□□ -1.21
Ptcd1-201ENSMUST00000031628 Trav13-1A0A075B644 110 aa7.46□□□□□ -1.21
Ptcd1-201ENSMUST00000031628 Rbm3O89086 153 aaKnown RBP7.46□□□□□ -1.21
Ptcd1-201ENSMUST00000031628 Fbn1Q61554 2873 aaKnown RBP7.46□□□□□ -1.22
Ptcd1-201ENSMUST00000031628 1700010B08RikQ9DAI7 102 aa7.46□□□□□ -1.22
Ptcd1-201ENSMUST00000031628 Stab1Q8R4Y4 2571 aa7.46□□□□□ -1.22
Ptcd1-201ENSMUST00000031628 Igkv6-13A0A0G2JGY3 119 aa7.46□□□□□ -1.22
Ptcd1-201ENSMUST00000031628 Gm11011D3Z3L9 86 aa7.46□□□□□ -1.22
Ptcd1-201ENSMUST00000031628 BikO70337 150 aa7.46□□□□□ -1.22
Ptcd1-201ENSMUST00000031628 Hivep1Q03172 2688 aa7.45□□□□□ -1.22
Ptcd1-201ENSMUST00000031628 ApcQ61315 2845 aa7.45□□□□□ -1.22
Ptcd1-201ENSMUST00000031628 9230102O04RikA2ASX7 82 aa7.45□□□□□ -1.22
Ptcd1-201ENSMUST00000031628 Gm10772F7AIG4 85 aa7.45□□□□□ -1.22
Ptcd1-201ENSMUST00000031628 A930002H24RikQ8C8Y3 163 aa7.45□□□□□ -1.22
Ptcd1-201ENSMUST00000031628 FlnbQ80X90 2602 aaKnown RBP7.44□□□□□ -1.22
Ptcd1-201ENSMUST00000031628 Tmem254aP0DN89 123 aa7.44□□□□□ -1.22
Ptcd1-201ENSMUST00000031628 Tmem254bP0DN90 123 aa7.44□□□□□ -1.22
Ptcd1-201ENSMUST00000031628 Tmem254cP0DN91 123 aa7.44□□□□□ -1.22
Ptcd1-201ENSMUST00000031628 Ndufa12Q7TMF3 145 aaKnown RBP7.44□□□□□ -1.22
Ptcd1-201ENSMUST00000031628 Gpha2Q925Q5 128 aa7.44□□□□□ -1.22
Ptcd1-201ENSMUST00000031628 Fxyd5P97808 178 aa7.43□□□□□ -1.22
Ptcd1-201ENSMUST00000031628 Spint4Q9D263 159 aa7.43□□□□□ -1.22
Ptcd1-201ENSMUST00000031628 Trav13n-2A0A0G2JF93 110 aa7.43□□□□□ -1.22
Ptcd1-201ENSMUST00000031628 4930546C10RikE9Q4Y3 121 aa7.43□□□□□ -1.22
Ptcd1-201ENSMUST00000031628 Itpr2Q9Z329 2701 aa7.42□□□□□ -1.22
Ptcd1-201ENSMUST00000031628 Lyrm9Q3UN90 78 aa7.42□□□□□ -1.22
Ptcd1-201ENSMUST00000031628 Notch2O35516 2470 aa7.42□□□□□ -1.22
Ptcd1-201ENSMUST00000031628 Igkv4-54A0A0G2JES9 117 aa7.41□□□□□ -1.22
Ptcd1-201ENSMUST00000031628 Igkv1-117A0A140T8M0 119 aa7.41□□□□□ -1.22
Ptcd1-201ENSMUST00000031628 Krtap24-1G3X9A2 248 aa7.41□□□□□ -1.22
Ptcd1-201ENSMUST00000031628 2010109I03RikQ9CQ11 111 aa7.41□□□□□ -1.22
Ptcd1-201ENSMUST00000031628 Igkv1-99F6XWB2 120 aa7.41□□□□□ -1.22
Ptcd1-201ENSMUST00000031628 PolqQ8CGS6 2544 aa7.41□□□□□ -1.22
Ptcd1-201ENSMUST00000031628 GfyJ3KML8 504 aa7.41□□□□□ -1.22
Ptcd1-201ENSMUST00000031628 Fam229bQ8CF36 80 aa7.41□□□□□ -1.22
Ptcd1-201ENSMUST00000031628 Trav13-2A0A075B649 110 aa7.4□□□□□ -1.22
Ptcd1-201ENSMUST00000031628 Vpreb2P13373 142 aa7.4□□□□□ -1.22
Ptcd1-201ENSMUST00000031628 OxtP35454 125 aa7.4□□□□□ -1.22
Ptcd1-201ENSMUST00000031628 Gm10160F6Y577 67 aa7.39□□□□□ -1.23
Ptcd1-201ENSMUST00000031628 Vmo1Q5SXG7 201 aa7.39□□□□□ -1.23
Ptcd1-201ENSMUST00000031628 Cox6b1P56391 86 aaKnown RBP7.39□□□□□ -1.23
Ptcd1-201ENSMUST00000031628 PrcdQ00LT2 53 aa7.39□□□□□ -1.23
Ptcd1-201ENSMUST00000031628 4930535I16RikQ9CUI2 172 aa7.39□□□□□ -1.23
Ptcd1-201ENSMUST00000031628 MobpQ9D2P8 170 aa7.39□□□□□ -1.23
Ptcd1-201ENSMUST00000031628 Nsd1O88491 2588 aaKnown RBP7.38□□□□□ -1.23
Ptcd1-201ENSMUST00000031628 Igkv4-53A0A0G2JFC6 119 aa7.38□□□□□ -1.23
Ptcd1-201ENSMUST00000031628 Chchd7Q8K2Q5 85 aa7.38□□□□□ -1.23
Ptcd1-201ENSMUST00000031628 EnhoQ8K1D8 76 aa7.37□□□□□ -1.23
Ptcd1-201ENSMUST00000031628 Defb50Q6TU36 73 aa7.37□□□□□ -1.23
Ptcd1-201ENSMUST00000031628 Igkv4-72A0A0B4J1I4 117 aa7.36□□□□□ -1.23
Ptcd1-201ENSMUST00000031628 4930524J08RikQ9CUJ5 163 aa7.36□□□□□ -1.23
Ptcd1-201ENSMUST00000031628 Zfand2aQ9JII7 171 aa7.36□□□□□ -1.23
Ptcd1-201ENSMUST00000031628 Wfdc12Q9JHY3 85 aa7.35□□□□□ -1.23
Ptcd1-201ENSMUST00000031628 Col6a5A6H584 2640 aa7.35□□□□□ -1.23
Ptcd1-201ENSMUST00000031628 Spink8Q09TK9 105 aa7.35□□□□□ -1.23
Ptcd1-201ENSMUST00000031628 Higd2aQ9CQJ1 106 aa7.35□□□□□ -1.23
Ptcd1-201ENSMUST00000031628 Gm10577Q3UDV9 132 aa7.34□□□□□ -1.23
Ptcd1-201ENSMUST00000031628 Lage3Q9CR70 148 aa7.34□□□□□ -1.23
Ptcd1-201ENSMUST00000031628 D730001G18RikA0A087WQU7 115 aa7.33□□□□□ -1.24
Ptcd1-201ENSMUST00000031628 E130114P18RikF6S0S7 154 aa7.33□□□□□ -1.24
Ptcd1-201ENSMUST00000031628 Acyp1P56376 99 aa7.33□□□□□ -1.24
Ptcd1-201ENSMUST00000031628 MplkipQ9D011 178 aa7.33□□□□□ -1.24
Ptcd1-201ENSMUST00000031628 Trav9n-4A0A075B631 113 aa7.32□□□□□ -1.24
Ptcd1-201ENSMUST00000031628 Trbv13-2A0A140T8N6 113 aa7.32□□□□□ -1.24
Ptcd1-201ENSMUST00000031628 UqcrqQ9CQ69 82 aa7.32□□□□□ -1.24
Ptcd1-201ENSMUST00000031628 Klk12B2RVZ0 247 aa7.31□□□□□ -1.24
Ptcd1-201ENSMUST00000031628 Spink4O35679 86 aa7.31□□□□□ -1.24
Ptcd1-201ENSMUST00000031628 Ufsp1Q9CZP0 217 aa7.31□□□□□ -1.24
Ptcd1-201ENSMUST00000031628 Gm7138L7N2C3 230 aa7.31□□□□□ -1.24
Ptcd1-201ENSMUST00000031628 Dad1P61804 113 aa7.31□□□□□ -1.24
Ptcd1-201ENSMUST00000031628 Gm3238W4VSP7 230 aa7.31□□□□□ -1.24
Ptcd1-201ENSMUST00000031628 Igkv2-109A0A075B5K6 120 aa7.3□□□□□ -1.24
Ptcd1-201ENSMUST00000031628 Odf3l2Q3TZ65 277 aa7.3□□□□□ -1.24
Ptcd1-201ENSMUST00000031628 Srrm2Q8BTI8 2703 aaKnown RBP7.3□□□□□ -1.24
Ptcd1-201ENSMUST00000031628 Igkv3-10A0A0G2JGN0 119 aa7.29□□□□□ -1.24
Ptcd1-201ENSMUST00000031628 A0A286YCN5 57 aa7.29□□□□□ -1.24
Ptcd1-201ENSMUST00000031628 E130208F15RikQ3UPV3 143 aa7.29□□□□□ -1.24
Retrieved 100 of 22,080 RNA–protein pairs in 79.9 ms