RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Gm9195A0A140LHT4 2805 aa5.97□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Rif1Q6PR54 2419 aaKnown RBP5.96□□□□□ -1.45
Sf3b1-201ENSMUST00000027127 Ranbp2Q9ERU9 3053 aaKnown RBP5.96□□□□□ -1.46
Sf3b1-201ENSMUST00000027127 P01755 137 aa5.96□□□□□ -1.46
Sf3b1-201ENSMUST00000027127 Rpl28P41105 137 aaKnown RBP5.96□□□□□ -1.46
Sf3b1-201ENSMUST00000027127 Nupr2Q497P3 102 aa5.96□□□□□ -1.46
Sf3b1-201ENSMUST00000027127 Nbeal1E9PYP2 2688 aa5.96□□□□□ -1.46
Sf3b1-201ENSMUST00000027127 Ube2d4D3YUH6 135 aa5.96□□□□□ -1.46
Sf3b1-201ENSMUST00000027127 TrrapQ80YV3 2565 aaKnown RBP5.96□□□□□ -1.46
Sf3b1-201ENSMUST00000027127 Fgf23Q9EPC2 251 aa5.96□□□□□ -1.46
Sf3b1-201ENSMUST00000027127 P06320 134 aa5.95□□□□□ -1.46
Sf3b1-201ENSMUST00000027127 Ighv8-13A0A075B5Y0 101 aa5.95□□□□□ -1.46
Sf3b1-201ENSMUST00000027127 Fam19a5Q91WE9 132 aa5.95□□□□□ -1.46
Sf3b1-201ENSMUST00000027127 Igf1P05017 153 aa5.95□□□□□ -1.46
Sf3b1-201ENSMUST00000027127 Atox1O08997 68 aaKnown RBP5.94□□□□□ -1.46
Sf3b1-201ENSMUST00000027127 Ankrd17Q99NH0 2603 aaKnown RBP5.94□□□□□ -1.46
Sf3b1-201ENSMUST00000027127 Ighv10-3A0A075B5T6 119 aa5.94□□□□□ -1.46
Sf3b1-201ENSMUST00000027127 Obox2E9PXV9 151 aa5.94□□□□□ -1.46
Sf3b1-201ENSMUST00000027127 Gm10135F6TEE5 83 aa5.94□□□□□ -1.46
Sf3b1-201ENSMUST00000027127 Gm10772F7AIG4 85 aa5.94□□□□□ -1.46
Sf3b1-201ENSMUST00000027127 Serp1Q9Z1W5 66 aa5.94□□□□□ -1.46
Sf3b1-201ENSMUST00000027127 Brca2P97929 3329 aa5.94□□□□□ -1.46
Sf3b1-201ENSMUST00000027127 A830031A19RikQ8BNT5 113 aa5.93□□□□□ -1.46
Sf3b1-201ENSMUST00000027127 4930556J24RikQ9D4U7 146 aa5.93□□□□□ -1.46
Sf3b1-201ENSMUST00000027127 SycnQ8VCK7 134 aa5.92□□□□□ -1.46
Sf3b1-201ENSMUST00000027127 BaalcQ8VHV1 145 aa5.92□□□□□ -1.46
Sf3b1-201ENSMUST00000027127 Igkv8-28A0A0G2JE47 121 aa5.92□□□□□ -1.46
Sf3b1-201ENSMUST00000027127 Ighv2-9A0A075B5Q5 116 aa5.92□□□□□ -1.46
Sf3b1-201ENSMUST00000027127 Gm9805F6YK59 57 aa5.92□□□□□ -1.46
Sf3b1-201ENSMUST00000027127 BptfA2A654 3036 aaKnown RBP5.91□□□□□ -1.46
Sf3b1-201ENSMUST00000027127 CdsnQ7TPC1 561 aa5.91□□□□□ -1.46
Sf3b1-201ENSMUST00000027127 2010109I03RikQ9CQ11 111 aa5.91□□□□□ -1.46
Sf3b1-201ENSMUST00000027127 Itpr3P70227 2670 aa5.91□□□□□ -1.46
Sf3b1-201ENSMUST00000027127 Ighv8-11A0A075B5X4 119 aa5.9□□□□□ -1.46
Sf3b1-201ENSMUST00000027127 Igkv3-7A0A0G2JE31 119 aa5.9□□□□□ -1.47
Sf3b1-201ENSMUST00000027127 Arhgap32Q811P8 2089 aa5.9□□□□□ -1.47
Sf3b1-201ENSMUST00000027127 Wfdc6bF6ULY1 148 aa5.9□□□□□ -1.47
Sf3b1-201ENSMUST00000027127 EnhoQ8K1D8 76 aa5.89□□□□□ -1.47
Sf3b1-201ENSMUST00000027127 Hectd1Q69ZR2 2618 aaKnown RBP5.89□□□□□ -1.47
Sf3b1-201ENSMUST00000027127 Arid1bE9Q4N7 2244 aa5.89□□□□□ -1.47
Sf3b1-201ENSMUST00000027127 4930524J08RikQ9CUJ5 163 aa5.89□□□□□ -1.47
Sf3b1-201ENSMUST00000027127 Hivep2Q3UHF7 2430 aa5.89□□□□□ -1.47
Sf3b1-201ENSMUST00000027127 Sostdc1Q9CQN4 206 aa5.88□□□□□ -1.47
Sf3b1-201ENSMUST00000027127 Vpreb1P13372 142 aa5.88□□□□□ -1.47
Sf3b1-201ENSMUST00000027127 Cdip1Q9DB75 208 aa5.88□□□□□ -1.47
Sf3b1-201ENSMUST00000027127 Gm11011D3Z3L9 86 aa5.87□□□□□ -1.47
Sf3b1-201ENSMUST00000027127 Usp24B1AY13 2617 aaKnown RBP5.87□□□□□ -1.47
Sf3b1-201ENSMUST00000027127 Epg5Q80TA9 2572 aa5.87□□□□□ -1.47
Sf3b1-201ENSMUST00000027127 C2cd3Q52KB6 2323 aa5.87□□□□□ -1.47
Sf3b1-201ENSMUST00000027127 Prrc2cQ3TLH4 2846 aaKnown RBP5.87□□□□□ -1.47
Sf3b1-201ENSMUST00000027127 Gm5153P01627 120 aa5.87□□□□□ -1.47
Sf3b1-201ENSMUST00000027127 Csdc2Q91YQ3 154 aa5.87□□□□□ -1.47
Sf3b1-201ENSMUST00000027127 Ighv1-56A0A0A6YXG2 117 aa5.86□□□□□ -1.47
Sf3b1-201ENSMUST00000027127 Sprr1bQ62267 153 aa5.86□□□□□ -1.47
Sf3b1-201ENSMUST00000027127 Ankrd11E9Q4F7 2643 aa5.86□□□□□ -1.47
Sf3b1-201ENSMUST00000027127 Dchs2A0A0A6YW72 3346 aa5.86□□□□□ -1.47
Sf3b1-201ENSMUST00000027127 Gm9903Q8C9Y8 129 aa5.86□□□□□ -1.47
Sf3b1-201ENSMUST00000027127 MtorQ9JLN9 2549 aa5.86□□□□□ -1.47
Sf3b1-201ENSMUST00000027127 A0A286YE49 62 aa5.86□□□□□ -1.47
Sf3b1-201ENSMUST00000027127 2310009B15RikA0A0A6YWI4 143 aa5.86□□□□□ -1.47
Sf3b1-201ENSMUST00000027127 Gm5142Q8C5X9 133 aa5.86□□□□□ -1.47
Sf3b1-201ENSMUST00000027127 H2al1kJ3QP08 105 aa5.86□□□□□ -1.47
Sf3b1-201ENSMUST00000027127 Gm17509Q9CZ61 145 aa5.85□□□□□ -1.47
Sf3b1-201ENSMUST00000027127 Gm12057A0A087WR21 115 aa5.85□□□□□ -1.47
Sf3b1-201ENSMUST00000027127 Zfp462B1AWL2 2495 aaKnown RBP5.85□□□□□ -1.47
Sf3b1-201ENSMUST00000027127 P01819 144 aa5.85□□□□□ -1.47
Sf3b1-201ENSMUST00000027127 TeppQ6IMH0 216 aa5.85□□□□□ -1.47
Sf3b1-201ENSMUST00000027127 Defb40Q70KL2 73 aa5.85□□□□□ -1.47
Sf3b1-201ENSMUST00000027127 Gcn1E9PVA8 2671 aaKnown RBP5.84□□□□□ -1.47
Sf3b1-201ENSMUST00000027127 Ubr5Q80TP3 2792 aa5.84□□□□□ -1.47
Sf3b1-201ENSMUST00000027127 Trav14-1A0A0G2JF94 121 aa5.84□□□□□ -1.47
Sf3b1-201ENSMUST00000027127 9230102O04RikA2ASX7 82 aa5.83□□□□□ -1.48
Sf3b1-201ENSMUST00000027127 Vps13cQ8BX70 3748 aa5.83□□□□□ -1.48
Sf3b1-201ENSMUST00000027127 Defb50Q6TU36 73 aa5.83□□□□□ -1.48
Sf3b1-201ENSMUST00000027127 FryE9Q8I9 3020 aa5.83□□□□□ -1.48
Sf3b1-201ENSMUST00000027127 Gm10845Q3UNY9 185 aa5.83□□□□□ -1.48
Sf3b1-201ENSMUST00000027127 Celsr1O35161 3034 aa5.82□□□□□ -1.48
Sf3b1-201ENSMUST00000027127 ScxQ64124 207 aa5.82□□□□□ -1.48
Sf3b1-201ENSMUST00000027127 Brwd1Q921C3 2304 aa5.81□□□□□ -1.48
Sf3b1-201ENSMUST00000027127 Gm16181B0V2H2 73 aa5.81□□□□□ -1.48
Sf3b1-201ENSMUST00000027127 Wfdc12Q9JHY3 85 aa5.81□□□□□ -1.48
Sf3b1-201ENSMUST00000027127 Igkv8-19A0A0G2JFN8 121 aa5.81□□□□□ -1.48
Sf3b1-201ENSMUST00000027127 Serp2Q6TAW2 65 aa5.81□□□□□ -1.48
Sf3b1-201ENSMUST00000027127 Unc79Q0KK59 2596 aa5.81□□□□□ -1.48
Sf3b1-201ENSMUST00000027127 A0A286YCN5 57 aa5.81□□□□□ -1.48
Sf3b1-201ENSMUST00000027127 Gm28374F6SG70 93 aa5.81□□□□□ -1.48
Sf3b1-201ENSMUST00000027127 E130208F15RikQ3UPV3 143 aa5.8□□□□□ -1.48
Sf3b1-201ENSMUST00000027127 FlnaQ8BTM8 2647 aaKnown RBP5.8□□□□□ -1.48
Sf3b1-201ENSMUST00000027127 Wfdc13Q5DQQ6 81 aa5.8□□□□□ -1.48
Sf3b1-201ENSMUST00000027127 Ly6g6cQ9Z1Q4 126 aa5.8□□□□□ -1.48
Sf3b1-201ENSMUST00000027127 Gm28539A0A087WSL9 92 aa5.8□□□□□ -1.48
Sf3b1-201ENSMUST00000027127 4930535I16RikQ9CUI2 172 aa5.8□□□□□ -1.48
Sf3b1-201ENSMUST00000027127 Cep192E9Q4Y4 2514 aaKnown RBP5.8□□□□□ -1.48
Sf3b1-201ENSMUST00000027127 Wfdc3Q14AE4 130 aa5.8□□□□□ -1.48
Sf3b1-201ENSMUST00000027127 Notch3Q61982 2318 aa5.79□□□□□ -1.48
Sf3b1-201ENSMUST00000027127 C130032M10RikQ8C888 123 aa5.79□□□□□ -1.48
Sf3b1-201ENSMUST00000027127 Defb10Q8R2I8 73 aa5.79□□□□□ -1.48
Sf3b1-201ENSMUST00000027127 Gm3250E9Q1M3 230 aa5.79□□□□□ -1.48
Sf3b1-201ENSMUST00000027127 Adm2Q7TNK8 150 aa5.78□□□□□ -1.48
Sf3b1-201ENSMUST00000027127 Celsr3Q91ZI0 3301 aa5.77□□□□□ -1.49
Retrieved 100 of 22,080 RNA–protein pairs in 49.6 ms