RNA–Protein interactions for RNA: ENSMUST00000021278.13

Ctc1-201, Transcript of CST complex subunit CTC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ctc1, Length 4,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-201ENSMUST00000021278 Igfn1Q3KNY0 2849 aa6.67□□□□□ -1.34
Ctc1-201ENSMUST00000021278 Col7a1Q63870 2944 aa6.67□□□□□ -1.34
Ctc1-201ENSMUST00000021278 Ighv1-66A0A075B5X5 117 aa6.67□□□□□ -1.34
Ctc1-201ENSMUST00000021278 Gm9887F6RFI0 207 aa6.67□□□□□ -1.34
Ctc1-201ENSMUST00000021278 Defb18Q30KP5 85 aa6.67□□□□□ -1.34
Ctc1-201ENSMUST00000021278 BC025920Q3US60 128 aa6.67□□□□□ -1.34
Ctc1-201ENSMUST00000021278 Defb38Q7TNV7 63 aa6.67□□□□□ -1.34
Ctc1-201ENSMUST00000021278 Coa6Q8BGD8 79 aa6.67□□□□□ -1.34
Ctc1-201ENSMUST00000021278 Ifitm6A0A1B0GS75 124 aa6.66□□□□□ -1.34
Ctc1-201ENSMUST00000021278 Nsun4C4P6S0 806 aaKnown RBP6.66□□□□□ -1.34
Ctc1-201ENSMUST00000021278 E130114P18RikF6S0S7 154 aa6.66□□□□□ -1.34
Ctc1-201ENSMUST00000021278 Igkv1-99F6XWB2 120 aa6.66□□□□□ -1.34
Ctc1-201ENSMUST00000021278 Tfpi2O35536 230 aa6.66□□□□□ -1.34
Ctc1-201ENSMUST00000021278 Gm9747Q810H1 104 aa6.66□□□□□ -1.34
Ctc1-201ENSMUST00000021278 Gm17689B3GLJ4 109 aa6.66□□□□□ -1.34
Ctc1-201ENSMUST00000021278 Igkv3-10A0A0G2JGN0 119 aa6.65□□□□□ -1.34
Ctc1-201ENSMUST00000021278 Edn3P48299 214 aa6.65□□□□□ -1.34
Ctc1-201ENSMUST00000021278 Gm5617Q91VN2 117 aa6.65□□□□□ -1.34
Ctc1-201ENSMUST00000021278 Ighv1-75A0A075B5Y2 117 aa6.65□□□□□ -1.35
Ctc1-201ENSMUST00000021278 Odf1Q61999 247 aa6.65□□□□□ -1.35
Ctc1-201ENSMUST00000021278 Defb40Q70KL2 73 aa6.65□□□□□ -1.35
Ctc1-201ENSMUST00000021278 4930470P17RikQ9D542 155 aa6.65□□□□□ -1.35
Ctc1-201ENSMUST00000021278 Reg3aO09037 175 aa6.65□□□□□ -1.35
Ctc1-201ENSMUST00000021278 Ighv2-3A0A075B696 115 aa6.64□□□□□ -1.35
Ctc1-201ENSMUST00000021278 Pde6gP09174 87 aa6.64□□□□□ -1.35
Ctc1-201ENSMUST00000021278 CstadQ9D245 104 aa6.64□□□□□ -1.35
Ctc1-201ENSMUST00000021278 Q9DAA7 145 aa6.64□□□□□ -1.35
Ctc1-201ENSMUST00000021278 Utp20Q5XG71 2788 aaKnown RBP6.64□□□□□ -1.35
Ctc1-201ENSMUST00000021278 Igkv1-88A0A140T8N1 120 aa6.64□□□□□ -1.35
Ctc1-201ENSMUST00000021278 Igkv8-21A0A140T8P7 120 aa6.64□□□□□ -1.35
Ctc1-201ENSMUST00000021278 GfyJ3KML8 504 aa6.63□□□□□ -1.35
Ctc1-201ENSMUST00000021278 Gm10553J3QPF1 123 aa6.63□□□□□ -1.35
Ctc1-201ENSMUST00000021278 Cdc42se1Q8BHL7 80 aa6.63□□□□□ -1.35
Ctc1-201ENSMUST00000021278 Ighv10-1A0A0B4J1J6 119 aa6.63□□□□□ -1.35
Ctc1-201ENSMUST00000021278 LhbO09108 141 aa6.63□□□□□ -1.35
Ctc1-201ENSMUST00000021278 Gm10549Q3URY4 149 aa6.63□□□□□ -1.35
Ctc1-201ENSMUST00000021278 Gm9195A0A140LHT4 2805 aa6.63□□□□□ -1.35
Ctc1-201ENSMUST00000021278 Igkv4-92A0A0B4J1I2 117 aa6.62□□□□□ -1.35
Ctc1-201ENSMUST00000021278 Gm9925F6T2U3 160 aa6.62□□□□□ -1.35
Ctc1-201ENSMUST00000021278 9530003J23RikQ8BM26 151 aa6.62□□□□□ -1.35
Ctc1-201ENSMUST00000021278 Nsd1O88491 2588 aaKnown RBP6.62□□□□□ -1.35
Ctc1-201ENSMUST00000021278 Vmo1Q5SXG7 201 aa6.61□□□□□ -1.35
Ctc1-201ENSMUST00000021278 Celsr2Q9R0M0 2920 aa6.61□□□□□ -1.35
Ctc1-201ENSMUST00000021278 Trav9-2A0A075B647 113 aa6.61□□□□□ -1.35
Ctc1-201ENSMUST00000021278 Gm8439G3UWA7 96 aa6.61□□□□□ -1.35
Ctc1-201ENSMUST00000021278 A830005F24RikQ8BRT5 167 aa6.61□□□□□ -1.35
Ctc1-201ENSMUST00000021278 Usp9yF8VPU6 2556 aa6.61□□□□□ -1.35
Ctc1-201ENSMUST00000021278 FlnaQ8BTM8 2647 aaKnown RBP6.61□□□□□ -1.35
Ctc1-201ENSMUST00000021278 Ighv3-3A0A0A6YWL2 116 aa6.61□□□□□ -1.35
Ctc1-201ENSMUST00000021278 Igkv8-18A0A0B4J1J3 123 aa6.61□□□□□ -1.35
Ctc1-201ENSMUST00000021278 A930002H24RikQ8C8Y3 163 aa6.61□□□□□ -1.35
Ctc1-201ENSMUST00000021278 Ighv1-59A0A0A6YXE0 117 aa6.6□□□□□ -1.35
Ctc1-201ENSMUST00000021278 A0A286YE49 62 aa6.6□□□□□ -1.35
Ctc1-201ENSMUST00000021278 Vpreb3D3Z6J4 130 aa6.6□□□□□ -1.35
Ctc1-201ENSMUST00000021278 Wfdc12Q9JHY3 85 aa6.6□□□□□ -1.35
Ctc1-201ENSMUST00000021278 Ighv10-3A0A075B5T6 119 aa6.6□□□□□ -1.35
Ctc1-201ENSMUST00000021278 3110070M22RikQ9DAQ7 118 aa6.6□□□□□ -1.35
Ctc1-201ENSMUST00000021278 Igkv3-3A0A140T8Q0 119 aa6.59□□□□□ -1.35
Ctc1-201ENSMUST00000021278 Cox17P56394 63 aa6.59□□□□□ -1.35
Ctc1-201ENSMUST00000021278 Igsf10Q3V1M1 2594 aa6.59□□□□□ -1.35
Ctc1-201ENSMUST00000021278 Reg3gO09049 174 aa6.58□□□□□ -1.36
Ctc1-201ENSMUST00000021278 Odf3l2Q3TZ65 277 aa6.58□□□□□ -1.36
Ctc1-201ENSMUST00000021278 Igkv8-27A0A0G2JF28 120 aa6.58□□□□□ -1.36
Ctc1-201ENSMUST00000021278 Igkv8-30A0A140T8M3 121 aa6.58□□□□□ -1.36
Ctc1-201ENSMUST00000021278 Znf575Q3TXZ1 239 aa6.58□□□□□ -1.36
Ctc1-201ENSMUST00000021278 Csmd1Q923L3 3564 aa6.58□□□□□ -1.36
Ctc1-201ENSMUST00000021278 P01745 121 aa6.58□□□□□ -1.36
Ctc1-201ENSMUST00000021278 Ighv1-56A0A0A6YXG2 117 aa6.57□□□□□ -1.36
Ctc1-201ENSMUST00000021278 Gm9805F6YK59 57 aa6.57□□□□□ -1.36
Ctc1-201ENSMUST00000021278 Gm10308Q9CVR5 141 aa6.57□□□□□ -1.36
Ctc1-201ENSMUST00000021278 Gm37988J3QM41 62 aa6.56□□□□□ -1.36
Ctc1-201ENSMUST00000021278 Ndufb1P0DN34 57 aa6.56□□□□□ -1.36
Ctc1-201ENSMUST00000021278 4930546C10RikE9Q4Y3 121 aa6.56□□□□□ -1.36
Ctc1-201ENSMUST00000021278 1810032O08RikE9PZV8 113 aa6.56□□□□□ -1.36
Ctc1-201ENSMUST00000021278 Wfdc13Q5DQQ6 81 aa6.55□□□□□ -1.36
Ctc1-201ENSMUST00000021278 A730015C16RikQ8C992 119 aa6.55□□□□□ -1.36
Ctc1-201ENSMUST00000021278 Wisp2Q9Z0G4 251 aa6.55□□□□□ -1.36
Ctc1-201ENSMUST00000021278 A0A286YCN5 57 aa6.55□□□□□ -1.36
Ctc1-201ENSMUST00000021278 Nop10Q9CQS2 64 aa6.55□□□□□ -1.36
Ctc1-201ENSMUST00000021278 Q9DAB9 146 aa6.55□□□□□ -1.36
Ctc1-201ENSMUST00000021278 P01786 117 aa6.54□□□□□ -1.36
Ctc1-201ENSMUST00000021278 Usmg5Q78IK2 58 aa6.54□□□□□ -1.36
Ctc1-201ENSMUST00000021278 Gm17521F6QAC8 156 aa6.54□□□□□ -1.36
Ctc1-201ENSMUST00000021278 Gm10322F7D7I4 111 aa6.54□□□□□ -1.36
Ctc1-201ENSMUST00000021278 Fgf23Q9EPC2 251 aa6.54□□□□□ -1.36
Ctc1-201ENSMUST00000021278 Igkv1-110A0A0B4J1I0 119 aa6.54□□□□□ -1.36
Ctc1-201ENSMUST00000021278 Pgpep1lQ9CWB5 130 aa6.54□□□□□ -1.36
Ctc1-201ENSMUST00000021278 1810062G17RikG3X8Y2 129 aa6.54□□□□□ -1.36
Ctc1-201ENSMUST00000021278 Gm10267M0QWD8 85 aa6.54□□□□□ -1.36
Ctc1-201ENSMUST00000021278 Gm9903Q8C9Y8 129 aa6.54□□□□□ -1.36
Ctc1-201ENSMUST00000021278 Ighv1-63A0A075B5X2 117 aa6.53□□□□□ -1.36
Ctc1-201ENSMUST00000021278 B9d2Q3UK10 175 aa6.53□□□□□ -1.36
Ctc1-201ENSMUST00000021278 Coa5Q99M07 74 aa6.53□□□□□ -1.36
Ctc1-201ENSMUST00000021278 Ighv2-7A0A075B5Q8 116 aa6.53□□□□□ -1.36
Ctc1-201ENSMUST00000021278 Gm7075D3Z497 112 aa6.53□□□□□ -1.36
Ctc1-201ENSMUST00000021278 Gm10490F6VBM2 120 aa6.53□□□□□ -1.36
Ctc1-201ENSMUST00000021278 Ovol3D3YYM0 189 aa6.52□□□□□ -1.37
Ctc1-201ENSMUST00000021278 Wfdc6bF6ULY1 148 aa6.52□□□□□ -1.37
Ctc1-201ENSMUST00000021278 Znf706Q9D115 76 aaKnown RBP6.52□□□□□ -1.37
Ctc1-201ENSMUST00000021278 Wfdc10Q3V2J9 124 aa6.52□□□□□ -1.37
Retrieved 100 of 22,080 RNA–protein pairs in 38.5 ms