RNA–Protein interactions for RNA: ENSMUST00000005749.5

Ctr9-201, Transcript of RNA polymerase-associated protein CTR9 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctr9, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9-201ENSMUST00000005749 Ighv2-9A0A075B5Q5 116 aa8.47□□□□□ -1.05
Ctr9-201ENSMUST00000005749 Gm9805F6YK59 57 aa8.47□□□□□ -1.05
Ctr9-201ENSMUST00000005749 Defb11Q8R2I7 77 aa8.47□□□□□ -1.05
Ctr9-201ENSMUST00000005749 B230307C23RikQ8BLB2 64 aa8.46□□□□□ -1.05
Ctr9-201ENSMUST00000005749 Gm26661M0QWV4 156 aa8.46□□□□□ -1.06
Ctr9-201ENSMUST00000005749 Gm17521F6QAC8 156 aa8.45□□□□□ -1.06
Ctr9-201ENSMUST00000005749 Spata3Q9D9T6 193 aa8.45□□□□□ -1.06
Ctr9-201ENSMUST00000005749 Gm10401E9Q3K6 71 aa8.45□□□□□ -1.06
Ctr9-201ENSMUST00000005749 BtcQ05928 177 aa8.45□□□□□ -1.06
Ctr9-201ENSMUST00000005749 Inafm2A0A1L1STD6 152 aa8.45□□□□□ -1.06
Ctr9-201ENSMUST00000005749 Plac8l1Q08EJ0 177 aa8.45□□□□□ -1.06
Ctr9-201ENSMUST00000005749 Gm26602M0QWA4 95 aa8.44□□□□□ -1.06
Ctr9-201ENSMUST00000005749 LbhQ9CX60 105 aa8.44□□□□□ -1.06
Ctr9-201ENSMUST00000005749 Crip3Q6Q6R3 243 aa8.44□□□□□ -1.06
Ctr9-201ENSMUST00000005749 4930535I16RikQ9CUI2 172 aa8.44□□□□□ -1.06
Ctr9-201ENSMUST00000005749 Ighv1-62-2A0A0A6YXZ4 119 aa8.43□□□□□ -1.06
Ctr9-201ENSMUST00000005749 Ighv8-13A0A075B5Y0 101 aa8.43□□□□□ -1.06
Ctr9-201ENSMUST00000005749 PkigO70139 76 aa8.43□□□□□ -1.06
Ctr9-201ENSMUST00000005749 Q9DAQ5 155 aa8.43□□□□□ -1.06
Ctr9-201ENSMUST00000005749 Akap9Q70FJ1 3797 aa8.42□□□□□ -1.06
Ctr9-201ENSMUST00000005749 Cox8cA6H666 72 aa8.42□□□□□ -1.06
Ctr9-201ENSMUST00000005749 1810062G17RikG3X8Y2 129 aa8.41□□□□□ -1.06
Ctr9-201ENSMUST00000005749 Wfdc10Q3V2J9 124 aa8.41□□□□□ -1.06
Ctr9-201ENSMUST00000005749 Defb12Q8K4N3 78 aa8.4□□□□□ -1.06
Ctr9-201ENSMUST00000005749 Tenm4Q3UHK6 2771 aa8.4□□□□□ -1.06
Ctr9-201ENSMUST00000005749 Gm28374F6SG70 93 aa8.4□□□□□ -1.06
Ctr9-201ENSMUST00000005749 Psmb11Q8BG41 302 aa8.4□□□□□ -1.07
Ctr9-201ENSMUST00000005749 Smim1P0C8K7 78 aa8.39□□□□□ -1.07
Ctr9-201ENSMUST00000005749 Odf3l2Q3TZ65 277 aa8.39□□□□□ -1.07
Ctr9-201ENSMUST00000005749 Ighv2-9-1A0A075B697 116 aa8.39□□□□□ -1.07
Ctr9-201ENSMUST00000005749 5730596B20RikQ8BQ08 205 aa8.39□□□□□ -1.07
Ctr9-201ENSMUST00000005749 4930556J24RikQ9D4U7 146 aa8.39□□□□□ -1.07
Ctr9-201ENSMUST00000005749 Gm16181B0V2H2 73 aa8.38□□□□□ -1.07
Ctr9-201ENSMUST00000005749 Fam240bJ3QMB3 78 aa8.38□□□□□ -1.07
Ctr9-201ENSMUST00000005749 Defb40Q70KL2 73 aa8.38□□□□□ -1.07
Ctr9-201ENSMUST00000005749 4930432M17RikQ3V0W9 174 aa8.38□□□□□ -1.07
Ctr9-201ENSMUST00000005749 Defa27F2Z403 93 aa8.37□□□□□ -1.07
Ctr9-201ENSMUST00000005749 Crip2Q9DCT8 208 aaKnown RBP8.37□□□□□ -1.07
Ctr9-201ENSMUST00000005749 Trav14-1A0A0G2JF94 121 aa8.36□□□□□ -1.07
Ctr9-201ENSMUST00000005749 Rbm3O89086 153 aaKnown RBP8.36□□□□□ -1.07
Ctr9-201ENSMUST00000005749 Timm17bQ9Z0V7 172 aa8.36□□□□□ -1.07
Ctr9-201ENSMUST00000005749 Igkv3-4A0A140T8Q4 119 aa8.36□□□□□ -1.07
Ctr9-201ENSMUST00000005749 Wfdc17Q5SSJ1 76 aa8.35□□□□□ -1.07
Ctr9-201ENSMUST00000005749 Adm2Q7TNK8 150 aa8.35□□□□□ -1.07
Ctr9-201ENSMUST00000005749 9530003J23RikQ8BM26 151 aa8.35□□□□□ -1.07
Ctr9-201ENSMUST00000005749 Muc5acE9QAQ8 3455 aa8.35□□□□□ -1.07
Ctr9-201ENSMUST00000005749 Smlr1J3QMJ4 66 aa8.35□□□□□ -1.07
Ctr9-201ENSMUST00000005749 Ube2d4D3YUH6 135 aa8.35□□□□□ -1.07
Ctr9-201ENSMUST00000005749 Gm20726G3UX18 150 aa8.35□□□□□ -1.07
Ctr9-201ENSMUST00000005749 BaalcQ8VHV1 145 aa8.34□□□□□ -1.07
Ctr9-201ENSMUST00000005749 Ormdl1Q921I0 153 aa8.34□□□□□ -1.07
Ctr9-201ENSMUST00000005749 Lypd5Q9D7Z7 256 aa8.34□□□□□ -1.07
Ctr9-201ENSMUST00000005749 Acyp1P56376 99 aa8.34□□□□□ -1.07
Ctr9-201ENSMUST00000005749 A830005F24RikQ8BRT5 167 aa8.33□□□□□ -1.08
Ctr9-201ENSMUST00000005749 Igkv3-3A0A140T8Q0 119 aa8.33□□□□□ -1.08
Ctr9-201ENSMUST00000005749 Gm11011D3Z3L9 86 aa8.33□□□□□ -1.08
Ctr9-201ENSMUST00000005749 BB014433Q8C5R5 389 aa8.33□□□□□ -1.08
Ctr9-201ENSMUST00000005749 Scgb1b2O35176 93 aa8.33□□□□□ -1.08
Ctr9-201ENSMUST00000005749 BC025920Q3US60 128 aa8.32□□□□□ -1.08
Ctr9-201ENSMUST00000005749 NpwA0A1L1STR8 176 aa8.32□□□□□ -1.08
Ctr9-201ENSMUST00000005749 3110070M22RikQ9DAQ7 118 aa8.32□□□□□ -1.08
Ctr9-201ENSMUST00000005749 Ighv10-3A0A075B5T6 119 aa8.31□□□□□ -1.08
Ctr9-201ENSMUST00000005749 Rpl28P41105 137 aaKnown RBP8.31□□□□□ -1.08
Ctr9-201ENSMUST00000005749 Gm10577Q3UDV9 132 aa8.31□□□□□ -1.08
Ctr9-201ENSMUST00000005749 2310009B15RikA0A0A6YWI4 143 aa8.31□□□□□ -1.08
Ctr9-201ENSMUST00000005749 CrygaP04345 174 aa8.31□□□□□ -1.08
Ctr9-201ENSMUST00000005749 A730009L09RikA0A1B0GS82 72 aa8.3□□□□□ -1.08
Ctr9-201ENSMUST00000005749 Krtap26-1Q9D7N2 215 aa8.3□□□□□ -1.08
Ctr9-201ENSMUST00000005749 Zfand2aQ9JII7 171 aa8.3□□□□□ -1.08
Ctr9-201ENSMUST00000005749 Igkv1-110A0A0B4J1I0 119 aa8.3□□□□□ -1.08
Ctr9-201ENSMUST00000005749 Ighv10-1A0A0B4J1J6 119 aa8.3□□□□□ -1.08
Ctr9-201ENSMUST00000005749 TeppQ6IMH0 216 aa8.29□□□□□ -1.08
Ctr9-201ENSMUST00000005749 FcgbpE9Q0B5 2583 aa8.29□□□□□ -1.08
Ctr9-201ENSMUST00000005749 BikO70337 150 aa8.29□□□□□ -1.08
Ctr9-201ENSMUST00000005749 Gm5142Q8C5X9 133 aa8.29□□□□□ -1.08
Ctr9-201ENSMUST00000005749 Wfdc3Q14AE4 130 aa8.28□□□□□ -1.08
Ctr9-201ENSMUST00000005749 Igkv1-117A0A140T8M0 119 aa8.28□□□□□ -1.08
Ctr9-201ENSMUST00000005749 Gm9887F6RFI0 207 aa8.28□□□□□ -1.08
Ctr9-201ENSMUST00000005749 Cox7bP56393 80 aa8.28□□□□□ -1.08
Ctr9-201ENSMUST00000005749 Tcl1b3P56842 122 aa8.28□□□□□ -1.08
Ctr9-201ENSMUST00000005749 Snhg11Q4G0K9 87 aa8.28□□□□□ -1.08
Ctr9-201ENSMUST00000005749 P06320 134 aa8.27□□□□□ -1.09
Ctr9-201ENSMUST00000005749 Tcl1b5P56845 121 aa8.27□□□□□ -1.09
Ctr9-201ENSMUST00000005749 Defb13Q8R2I4 64 aa8.27□□□□□ -1.09
Ctr9-201ENSMUST00000005749 Prr15lQ8JZM2 100 aa8.27□□□□□ -1.09
Ctr9-201ENSMUST00000005749 MobpQ9D2P8 170 aa8.27□□□□□ -1.09
Ctr9-201ENSMUST00000005749 Ccdc179J3QM76 67 aa8.26□□□□□ -1.09
Ctr9-201ENSMUST00000005749 Pdzd2E9Q1M1 2796 aa8.26□□□□□ -1.09
Ctr9-201ENSMUST00000005749 Gm36176A0A1W2P8D5 158 aa8.25□□□□□ -1.09
Ctr9-201ENSMUST00000005749 Gm12353A2AGJ4 60 aa8.25□□□□□ -1.09
Ctr9-201ENSMUST00000005749 Igkv8-21A0A140T8P7 120 aa8.24□□□□□ -1.09
Ctr9-201ENSMUST00000005749 Defb37Q7TMD2 62 aa8.24□□□□□ -1.09
Ctr9-201ENSMUST00000005749 Gm17509Q9CZ61 145 aa8.24□□□□□ -1.09
Ctr9-201ENSMUST00000005749 Naa38Q9D2U5 125 aa8.24□□□□□ -1.09
Ctr9-201ENSMUST00000005749 E130208F15RikQ3UPV3 143 aa8.24□□□□□ -1.09
Ctr9-201ENSMUST00000005749 Igf1P05017 153 aa8.23□□□□□ -1.09
Ctr9-201ENSMUST00000005749 Tmem254aP0DN89 123 aa8.23□□□□□ -1.09
Ctr9-201ENSMUST00000005749 Tmem254bP0DN90 123 aa8.23□□□□□ -1.09
Ctr9-201ENSMUST00000005749 Tmem254cP0DN91 123 aa8.23□□□□□ -1.09
Ctr9-201ENSMUST00000005749 Klk9Q32M27 251 aa8.23□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 43.1 ms