RNA–Protein interactions for RNA: ENSMUST00000202945.3

Ube3a-216, Transcript of Ubiquitin-protein ligase E3A, mousemouse

TSL 1 (best) BASIC

Gene Ube3a, Length 3,889 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3a-216ENSMUST00000202945 Pglyrp1O88593 182 aa9.74□□□□□ -0.85
Ube3a-216ENSMUST00000202945 Ighv1-63A0A075B5X2 117 aa9.73□□□□□ -0.85
Ube3a-216ENSMUST00000202945 P01729 129 aa9.73□□□□□ -0.85
Ube3a-216ENSMUST00000202945 Cd99Q8VCN6 175 aa9.73□□□□□ -0.85
Ube3a-216ENSMUST00000202945 E130218I03RikA0A0U1RNU5 63 aa9.73□□□□□ -0.85
Ube3a-216ENSMUST00000202945 PrlhG3UWC3 86 aa9.73□□□□□ -0.85
Ube3a-216ENSMUST00000202945 CenpwQ3URR0 86 aa9.73□□□□□ -0.85
Ube3a-216ENSMUST00000202945 Trav13-4-dv7A0A075B6C2 110 aa9.73□□□□□ -0.85
Ube3a-216ENSMUST00000202945 Esm1Q9QYY7 184 aa9.73□□□□□ -0.85
Ube3a-216ENSMUST00000202945 B230217C12RikE9Q3Z1 139 aa9.72□□□□□ -0.85
Ube3a-216ENSMUST00000202945 Rpl35aO55142 110 aa9.72□□□□□ -0.85
Ube3a-216ENSMUST00000202945 Polr2kQ63871 58 aa9.72□□□□□ -0.85
Ube3a-216ENSMUST00000202945 Ighv1-49A0A0A6YWX2 117 aa9.72□□□□□ -0.85
Ube3a-216ENSMUST00000202945 Helz2E9QAM5 2947 aaKnown RBP9.72□□□□□ -0.85
Ube3a-216ENSMUST00000202945 P01738 130 aa9.71□□□□□ -0.86
Ube3a-216ENSMUST00000202945 Defb12Q8K4N3 78 aa9.7□□□□□ -0.86
Ube3a-216ENSMUST00000202945 Fam110dQ80X91 271 aa9.69□□□□□ -0.86
Ube3a-216ENSMUST00000202945 Gm9922Q8C3P1 144 aa9.69□□□□□ -0.86
Ube3a-216ENSMUST00000202945 Pet100P0DJE0 76 aa9.69□□□□□ -0.86
Ube3a-216ENSMUST00000202945 Fam19a5Q91WE9 132 aa9.68□□□□□ -0.86
Ube3a-216ENSMUST00000202945 Erdr1J3QMM0 206 aa9.68□□□□□ -0.86
Ube3a-216ENSMUST00000202945 Dad1P61804 113 aa9.68□□□□□ -0.86
Ube3a-216ENSMUST00000202945 Gm9767G3X930 207 aa9.68□□□□□ -0.86
Ube3a-216ENSMUST00000202945 P01823 113 aa9.68□□□□□ -0.86
Ube3a-216ENSMUST00000202945 EnhoQ8K1D8 76 aa9.67□□□□□ -0.86
Ube3a-216ENSMUST00000202945 SnurfQ9WU12 71 aa9.67□□□□□ -0.86
Ube3a-216ENSMUST00000202945 Igkv4-68A0A0B4J1I7 117 aa9.67□□□□□ -0.86
Ube3a-216ENSMUST00000202945 Klk12B2RVZ0 247 aa9.67□□□□□ -0.86
Ube3a-216ENSMUST00000202945 Vpreb1P13372 142 aa9.66□□□□□ -0.86
Ube3a-216ENSMUST00000202945 ScxQ64124 207 aa9.66□□□□□ -0.86
Ube3a-216ENSMUST00000202945 Gm17472A0A075B683 117 aa9.66□□□□□ -0.86
Ube3a-216ENSMUST00000202945 Trav9d-3A0A075B695 113 aa9.66□□□□□ -0.86
Ube3a-216ENSMUST00000202945 SbsponQ3UPR9 264 aa9.66□□□□□ -0.86
Ube3a-216ENSMUST00000202945 Eif4ebp3Q80VV3 101 aa9.66□□□□□ -0.86
Ube3a-216ENSMUST00000202945 Lamtor3O88653 124 aa9.65□□□□□ -0.86
Ube3a-216ENSMUST00000202945 Rpl18aP62717 176 aaKnown RBP9.65□□□□□ -0.86
Ube3a-216ENSMUST00000202945 Ubl5Q9EPV8 73 aa9.65□□□□□ -0.86
Ube3a-216ENSMUST00000202945 Trav13-2A0A075B649 110 aa9.65□□□□□ -0.86
Ube3a-216ENSMUST00000202945 Eif4ebp1Q60876 117 aa9.65□□□□□ -0.86
Ube3a-216ENSMUST00000202945 Hspg2Q05793 3707 aaKnown RBP9.65□□□□□ -0.86
Ube3a-216ENSMUST00000202945 FlnbQ80X90 2602 aaKnown RBP9.65□□□□□ -0.87
Ube3a-216ENSMUST00000202945 4930442H23RikQ9D5G7 103 aa9.64□□□□□ -0.87
Ube3a-216ENSMUST00000202945 Ighv1-85A0A075B5Y6 117 aa9.64□□□□□ -0.87
Ube3a-216ENSMUST00000202945 AtrQ9JKK8 2635 aa9.64□□□□□ -0.87
Ube3a-216ENSMUST00000202945 Cd164l2Q9D6W7 172 aa9.64□□□□□ -0.87
Ube3a-216ENSMUST00000202945 Serp2Q6TAW2 65 aa9.63□□□□□ -0.87
Ube3a-216ENSMUST00000202945 Tenm4Q3UHK6 2771 aa9.63□□□□□ -0.87
Ube3a-216ENSMUST00000202945 Trav13d-4A0A0G2JFX3 110 aa9.63□□□□□ -0.87
Ube3a-216ENSMUST00000202945 CicQ924A2 2510 aa9.63□□□□□ -0.87
Ube3a-216ENSMUST00000202945 Gm10647E9Q8X0 124 aa9.63□□□□□ -0.87
Ube3a-216ENSMUST00000202945 Nop10Q9CQS2 64 aa9.63□□□□□ -0.87
Ube3a-216ENSMUST00000202945 Crlf1Q9JM58 425 aa9.62□□□□□ -0.87
Ube3a-216ENSMUST00000202945 Ifitm1Q9D103 106 aa9.62□□□□□ -0.87
Ube3a-216ENSMUST00000202945 Krtap27-1E9PX37 202 aa9.61□□□□□ -0.87
Ube3a-216ENSMUST00000202945 Gm10509O88255 85 aa9.61□□□□□ -0.87
Ube3a-216ENSMUST00000202945 Ly6c2P0CW03 131 aa9.61□□□□□ -0.87
Ube3a-216ENSMUST00000202945 Tmem254aP0DN89 123 aa9.61□□□□□ -0.87
Ube3a-216ENSMUST00000202945 Tmem254bP0DN90 123 aa9.61□□□□□ -0.87
Ube3a-216ENSMUST00000202945 Tmem254cP0DN91 123 aa9.61□□□□□ -0.87
Ube3a-216ENSMUST00000202945 1700010B08RikQ9DAI7 102 aa9.61□□□□□ -0.87
Ube3a-216ENSMUST00000202945 CrygdP04342 174 aa9.61□□□□□ -0.87
Ube3a-216ENSMUST00000202945 Smr3aQ61900 147 aa9.61□□□□□ -0.87
Ube3a-216ENSMUST00000202945 Rnf152Q8BG47 203 aa9.6□□□□□ -0.87
Ube3a-216ENSMUST00000202945 Lage3Q9CR70 148 aa9.6□□□□□ -0.87
Ube3a-216ENSMUST00000202945 Lypd5Q9D7Z7 256 aa9.6□□□□□ -0.87
Ube3a-216ENSMUST00000202945 BC025920Q3US60 128 aa9.6□□□□□ -0.87
Ube3a-216ENSMUST00000202945 Fam19a1Q7TPG8 133 aa9.59□□□□□ -0.87
Ube3a-216ENSMUST00000202945 Defb42Q8BVB5 75 aa9.59□□□□□ -0.87
Ube3a-216ENSMUST00000202945 Q99M08 65 aa9.59□□□□□ -0.87
Ube3a-216ENSMUST00000202945 1700011M02RikB1AX35 88 aa9.58□□□□□ -0.88
Ube3a-216ENSMUST00000202945 Gm10322F7D7I4 111 aa9.58□□□□□ -0.88
Ube3a-216ENSMUST00000202945 Cox6b1P56391 86 aaKnown RBP9.58□□□□□ -0.88
Ube3a-216ENSMUST00000202945 Tmem258P61166 79 aa9.58□□□□□ -0.88
Ube3a-216ENSMUST00000202945 Nbeal2Q6ZQA0 2742 aa9.58□□□□□ -0.88
Ube3a-216ENSMUST00000202945 Tex15F8VPN2 2785 aa9.58□□□□□ -0.88
Ube3a-216ENSMUST00000202945 Trbv13-2A0A140T8N6 113 aa9.58□□□□□ -0.88
Ube3a-216ENSMUST00000202945 7530416G11RikJ3QJX6 159 aa9.57□□□□□ -0.88
Ube3a-216ENSMUST00000202945 Fbn1Q61554 2873 aaKnown RBP9.57□□□□□ -0.88
Ube3a-216ENSMUST00000202945 Trav4-3A0A0B4J1K1 110 aa9.57□□□□□ -0.88
Ube3a-216ENSMUST00000202945 Spink8Q09TK9 105 aa9.57□□□□□ -0.88
Ube3a-216ENSMUST00000202945 9230102O04RikA2ASX7 82 aa9.56□□□□□ -0.88
Ube3a-216ENSMUST00000202945 Krtap24-1G3X9A2 248 aa9.56□□□□□ -0.88
Ube3a-216ENSMUST00000202945 Rpl39lQ9CQD0 51 aa9.56□□□□□ -0.88
Ube3a-216ENSMUST00000202945 P06329 120 aa9.56□□□□□ -0.88
Ube3a-216ENSMUST00000202945 Ighv1-11A0A0A6YWI9 117 aa9.56□□□□□ -0.88
Ube3a-216ENSMUST00000202945 Cox7a1P56392 80 aa9.56□□□□□ -0.88
Ube3a-216ENSMUST00000202945 4930524J08RikQ9CUJ5 163 aa9.56□□□□□ -0.88
Ube3a-216ENSMUST00000202945 Igkv4-78A0A0A6YYE5 119 aa9.55□□□□□ -0.88
Ube3a-216ENSMUST00000202945 Igkv8-16A0A0G2JDG9 121 aa9.55□□□□□ -0.88
Ube3a-216ENSMUST00000202945 2010109I03RikQ9CQ11 111 aa9.55□□□□□ -0.88
Ube3a-216ENSMUST00000202945 Itpr2Q9Z329 2701 aa9.55□□□□□ -0.88
Ube3a-216ENSMUST00000202945 Shisa2Q8QZV2 295 aa9.55□□□□□ -0.88
Ube3a-216ENSMUST00000202945 PtprqP0C5E4 2300 aa9.54□□□□□ -0.88
Ube3a-216ENSMUST00000202945 Ighv1-62-1A0A075B5U3 116 aa9.54□□□□□ -0.88
Ube3a-216ENSMUST00000202945 Igkv4-61A0A0G2JH00 117 aa9.54□□□□□ -0.88
Ube3a-216ENSMUST00000202945 Cox17P56394 63 aa9.54□□□□□ -0.88
Ube3a-216ENSMUST00000202945 Hivep1Q03172 2688 aa9.54□□□□□ -0.88
Ube3a-216ENSMUST00000202945 P01755 137 aa9.54□□□□□ -0.88
Ube3a-216ENSMUST00000202945 Igkv4-79A0A075B5L8 119 aa9.53□□□□□ -0.88
Ube3a-216ENSMUST00000202945 Ly6gP35461 111 aa9.53□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 88.1 ms