RNA–Protein interactions for RNA: ENSMUST00000136980.7

Prpf40b-208, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40b, Length 3,047 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-208ENSMUST00000136980 Krtap16-1A2A5X5 502 aa8.23□□□□□ -1.09
Prpf40b-208ENSMUST00000136980 Defa27F2Z403 93 aa8.23□□□□□ -1.09
Prpf40b-208ENSMUST00000136980 Smim26Q3V460 107 aa8.23□□□□□ -1.09
Prpf40b-208ENSMUST00000136980 Gm10300Q8C8P7 189 aa8.23□□□□□ -1.09
Prpf40b-208ENSMUST00000136980 Dnal4Q9DCM4 105 aa8.23□□□□□ -1.09
Prpf40b-208ENSMUST00000136980 Pfn2Q9JJV2 140 aa8.23□□□□□ -1.09
Prpf40b-208ENSMUST00000136980 Cops9Q3U898 57 aa8.22□□□□□ -1.09
Prpf40b-208ENSMUST00000136980 5730596B20RikQ8BQ08 205 aa8.22□□□□□ -1.09
Prpf40b-208ENSMUST00000136980 4930519P11RikQ9CUJ8 166 aa8.22□□□□□ -1.09
Prpf40b-208ENSMUST00000136980 Krtap26-1Q9D7N2 215 aa8.22□□□□□ -1.09
Prpf40b-208ENSMUST00000136980 Ighv1-11A0A0A6YWI9 117 aa8.21□□□□□ -1.09
Prpf40b-208ENSMUST00000136980 Gm10509O88255 85 aa8.21□□□□□ -1.09
Prpf40b-208ENSMUST00000136980 Ube2e2Q91W82 201 aa8.21□□□□□ -1.09
Prpf40b-208ENSMUST00000136980 4930442H23RikQ9D5G7 103 aa8.21□□□□□ -1.09
Prpf40b-208ENSMUST00000136980 Trav9d-4A0A0G2JG37 103 aa8.21□□□□□ -1.1
Prpf40b-208ENSMUST00000136980 Krtap27-1E9PX37 202 aa8.21□□□□□ -1.1
Prpf40b-208ENSMUST00000136980 SelenowP63300 88 aa8.21□□□□□ -1.1
Prpf40b-208ENSMUST00000136980 Gm815Q3UWS2 115 aa8.21□□□□□ -1.1
Prpf40b-208ENSMUST00000136980 4930470P17RikQ9D542 155 aa8.21□□□□□ -1.1
Prpf40b-208ENSMUST00000136980 Ighv1-58A0A075B5W9 117 aa8.21□□□□□ -1.1
Prpf40b-208ENSMUST00000136980 Igkv1-35A0A0G2JDE5 120 aa8.21□□□□□ -1.1
Prpf40b-208ENSMUST00000136980 Igkv4-79A0A075B5L8 119 aa8.2□□□□□ -1.1
Prpf40b-208ENSMUST00000136980 A930009A15RikG3UYI6 118 aa8.2□□□□□ -1.1
Prpf40b-208ENSMUST00000136980 Defb29Q8BGW9 78 aa8.2□□□□□ -1.1
Prpf40b-208ENSMUST00000136980 Gm17472A0A075B683 117 aa8.19□□□□□ -1.1
Prpf40b-208ENSMUST00000136980 Ube2d4D3YUH6 135 aa8.19□□□□□ -1.1
Prpf40b-208ENSMUST00000136980 Gm10322F7D7I4 111 aa8.19□□□□□ -1.1
Prpf40b-208ENSMUST00000136980 Pet100P0DJE0 76 aa8.19□□□□□ -1.1
Prpf40b-208ENSMUST00000136980 Rif1Q6PR54 2419 aaKnown RBP8.19□□□□□ -1.1
Prpf40b-208ENSMUST00000136980 Lamtor3O88653 124 aa8.19□□□□□ -1.1
Prpf40b-208ENSMUST00000136980 Myo9aQ8C170 2542 aa8.19□□□□□ -1.1
Prpf40b-208ENSMUST00000136980 Trav13-4-dv7A0A075B6C2 110 aa8.19□□□□□ -1.1
Prpf40b-208ENSMUST00000136980 Igkv6-13A0A0G2JGY3 119 aa8.19□□□□□ -1.1
Prpf40b-208ENSMUST00000136980 Igkv4-68A0A0B4J1I7 117 aa8.18□□□□□ -1.1
Prpf40b-208ENSMUST00000136980 Lst1O08843 95 aa8.18□□□□□ -1.1
Prpf40b-208ENSMUST00000136980 Rbm3O89086 153 aaKnown RBP8.18□□□□□ -1.1
Prpf40b-208ENSMUST00000136980 1700011M02RikB1AX35 88 aa8.18□□□□□ -1.1
Prpf40b-208ENSMUST00000136980 Gm5153P01627 120 aa8.18□□□□□ -1.1
Prpf40b-208ENSMUST00000136980 Bri3P28662 125 aa8.18□□□□□ -1.1
Prpf40b-208ENSMUST00000136980 Usp24B1AY13 2617 aaKnown RBP8.17□□□□□ -1.1
Prpf40b-208ENSMUST00000136980 A0A286YE02 88 aa8.17□□□□□ -1.1
Prpf40b-208ENSMUST00000136980 P01738 130 aa8.17□□□□□ -1.1
Prpf40b-208ENSMUST00000136980 P01819 144 aa8.17□□□□□ -1.1
Prpf40b-208ENSMUST00000136980 Rpl28P41105 137 aaKnown RBP8.17□□□□□ -1.1
Prpf40b-208ENSMUST00000136980 Timm17bQ9Z0V7 172 aa8.17□□□□□ -1.1
Prpf40b-208ENSMUST00000136980 Pla2g2cP48076 150 aa8.17□□□□□ -1.1
Prpf40b-208ENSMUST00000136980 Gm7257D3YX25 99 aa8.16□□□□□ -1.1
Prpf40b-208ENSMUST00000136980 Ighv1-62-1A0A075B5U3 116 aa8.16□□□□□ -1.1
Prpf40b-208ENSMUST00000136980 Gm10647E9Q8X0 124 aa8.16□□□□□ -1.1
Prpf40b-208ENSMUST00000136980 BikO70337 150 aa8.16□□□□□ -1.1
Prpf40b-208ENSMUST00000136980 Gm9925F6T2U3 160 aa8.16□□□□□ -1.1
Prpf40b-208ENSMUST00000136980 1700010B08RikQ9DAI7 102 aa8.16□□□□□ -1.1
Prpf40b-208ENSMUST00000136980 B230359F08RikA0A0B4J1K3 109 aa8.15□□□□□ -1.1
Prpf40b-208ENSMUST00000136980 P01745 121 aa8.15□□□□□ -1.1
Prpf40b-208ENSMUST00000136980 Erdr1J3QMM0 206 aa8.15□□□□□ -1.11
Prpf40b-208ENSMUST00000136980 Tmem254aP0DN89 123 aa8.15□□□□□ -1.11
Prpf40b-208ENSMUST00000136980 Tmem254bP0DN90 123 aa8.15□□□□□ -1.11
Prpf40b-208ENSMUST00000136980 Tmem254cP0DN91 123 aa8.15□□□□□ -1.11
Prpf40b-208ENSMUST00000136980 Bles03Q8VD62 251 aa8.14□□□□□ -1.11
Prpf40b-208ENSMUST00000136980 P01786 117 aa8.14□□□□□ -1.11
Prpf40b-208ENSMUST00000136980 Cep192E9Q4Y4 2514 aaKnown RBP8.14□□□□□ -1.11
Prpf40b-208ENSMUST00000136980 MtorQ9JLN9 2549 aa8.14□□□□□ -1.11
Prpf40b-208ENSMUST00000136980 CubnQ9JLB4 3623 aa8.14□□□□□ -1.11
Prpf40b-208ENSMUST00000136980 Ppp1r32Q148A4 427 aa8.13□□□□□ -1.11
Prpf40b-208ENSMUST00000136980 Trav9d-3A0A075B695 113 aa8.13□□□□□ -1.11
Prpf40b-208ENSMUST00000136980 Gm10160F6Y577 67 aa8.13□□□□□ -1.11
Prpf40b-208ENSMUST00000136980 Fgfbp3Q1HCM0 245 aa8.12□□□□□ -1.11
Prpf40b-208ENSMUST00000136980 C2cd3Q52KB6 2323 aa8.12□□□□□ -1.11
Prpf40b-208ENSMUST00000136980 Igkv1-117A0A140T8M0 119 aa8.12□□□□□ -1.11
Prpf40b-208ENSMUST00000136980 CnbpP53996 178 aaKnown RBP8.12□□□□□ -1.11
Prpf40b-208ENSMUST00000136980 Ndufa12Q7TMF3 145 aaKnown RBP8.12□□□□□ -1.11
Prpf40b-208ENSMUST00000136980 Cox17P56394 63 aa8.11□□□□□ -1.11
Prpf40b-208ENSMUST00000136980 Trav13n-2A0A0G2JF93 110 aa8.11□□□□□ -1.11
Prpf40b-208ENSMUST00000136980 4930535I16RikQ9CUI2 172 aa8.11□□□□□ -1.11
Prpf40b-208ENSMUST00000136980 Muc2Q80Z19 2680 aa8.11□□□□□ -1.11
Prpf40b-208ENSMUST00000136980 Cox6b1P56391 86 aaKnown RBP8.11□□□□□ -1.11
Prpf40b-208ENSMUST00000136980 Vmo1Q5SXG7 201 aa8.11□□□□□ -1.11
Prpf40b-208ENSMUST00000136980 Xirp2Q4U4S6 3784 aa8.1□□□□□ -1.11
Prpf40b-208ENSMUST00000136980 PrlhG3UWC3 86 aa8.1□□□□□ -1.11
Prpf40b-208ENSMUST00000136980 Gm37988J3QM41 62 aa8.1□□□□□ -1.11
Prpf40b-208ENSMUST00000136980 Tfpi2O35536 230 aa8.1□□□□□ -1.11
Prpf40b-208ENSMUST00000136980 P01755 137 aa8.1□□□□□ -1.11
Prpf40b-208ENSMUST00000136980 Plac8l1Q08EJ0 177 aa8.1□□□□□ -1.11
Prpf40b-208ENSMUST00000136980 Sox16Q62247 57 aa8.1□□□□□ -1.11
Prpf40b-208ENSMUST00000136980 4930524J08RikQ9CUJ5 163 aa8.1□□□□□ -1.11
Prpf40b-208ENSMUST00000136980 Vpreb2P13373 142 aa8.09□□□□□ -1.11
Prpf40b-208ENSMUST00000136980 Trav13-1A0A075B644 110 aa8.09□□□□□ -1.11
Prpf40b-208ENSMUST00000136980 Prh1P05142 261 aa8.09□□□□□ -1.11
Prpf40b-208ENSMUST00000136980 Lyrm9Q3UN90 78 aa8.09□□□□□ -1.11
Prpf40b-208ENSMUST00000136980 Trav13d-4A0A0G2JFX3 110 aa8.08□□□□□ -1.12
Prpf40b-208ENSMUST00000136980 Cdc42se2Q8BGH7 84 aa8.08□□□□□ -1.12
Prpf40b-208ENSMUST00000136980 Nop10Q9CQS2 64 aa8.08□□□□□ -1.12
Prpf40b-208ENSMUST00000136980 Spint4Q9D263 159 aa8.08□□□□□ -1.12
Prpf40b-208ENSMUST00000136980 Mapk1ip1lQ8BH93 242 aa8.08□□□□□ -1.12
Prpf40b-208ENSMUST00000136980 BC048502Q80Y74 154 aa8.08□□□□□ -1.12
Prpf40b-208ENSMUST00000136980 Rpl36aP83882 106 aaKnown RBP8.07□□□□□ -1.12
Prpf40b-208ENSMUST00000136980 EnhoQ8K1D8 76 aa8.07□□□□□ -1.12
Prpf40b-208ENSMUST00000136980 Hivep3A2A884 2348 aa8.07□□□□□ -1.12
Prpf40b-208ENSMUST00000136980 Setd2E9Q5F9 2537 aa8.07□□□□□ -1.12
Prpf40b-208ENSMUST00000136980 Ankrd11E9Q4F7 2643 aa8.07□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 172.9 ms