RNA–Protein interactions for RNA: ENSMUST00000034868.13

Clk1-201, Transcript of Dual specificity protein kinase CLK1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clk1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1-201ENSMUST00000034868 MtorQ9JLN9 2549 aa3.54□□□□□ -1.84
Clk1-201ENSMUST00000034868 Asxl3Q8C4A5 2259 aa3.54□□□□□ -1.84
Clk1-201ENSMUST00000034868 Igkv4-69A0A0B4J1I6 116 aa3.53□□□□□ -1.84
Clk1-201ENSMUST00000034868 Defb47Q30KN1 79 aa3.53□□□□□ -1.84
Clk1-201ENSMUST00000034868 SrarpQ3ULG3 163 aa3.53□□□□□ -1.84
Clk1-201ENSMUST00000034868 Mki67E9PVX6 3177 aaKnown RBP3.53□□□□□ -1.84
Clk1-201ENSMUST00000034868 C2cd3Q52KB6 2323 aa3.53□□□□□ -1.84
Clk1-201ENSMUST00000034868 MgaA2AWL7 3003 aaKnown RBP3.53□□□□□ -1.84
Clk1-201ENSMUST00000034868 Arfgef3Q3UGY8 2170 aa3.53□□□□□ -1.84
Clk1-201ENSMUST00000034868 Igkv13-85A0A075B666 115 aa3.53□□□□□ -1.84
Clk1-201ENSMUST00000034868 D730001G18RikA0A087WQU7 115 aa3.53□□□□□ -1.84
Clk1-201ENSMUST00000034868 Iqcf6G3UWF2 157 aa3.53□□□□□ -1.84
Clk1-201ENSMUST00000034868 Wfdc18P62810 74 aa3.53□□□□□ -1.84
Clk1-201ENSMUST00000034868 Defb22Q8BVC1 179 aa3.53□□□□□ -1.84
Clk1-201ENSMUST00000034868 Dnal4Q9DCM4 105 aa3.53□□□□□ -1.84
Clk1-201ENSMUST00000034868 Zzef1Q5SSH7 2924 aa3.52□□□□□ -1.85
Clk1-201ENSMUST00000034868 Ighv1-50A0A075B5W1 117 aa3.52□□□□□ -1.85
Clk1-201ENSMUST00000034868 Ighv1-9A0A0A6YW37 117 aa3.52□□□□□ -1.85
Clk1-201ENSMUST00000034868 Igkv13-84A0A140T8N3 115 aa3.52□□□□□ -1.85
Clk1-201ENSMUST00000034868 Igkv6-14A0A140T8P1 115 aa3.52□□□□□ -1.85
Clk1-201ENSMUST00000034868 P01746 140 aa3.52□□□□□ -1.85
Clk1-201ENSMUST00000034868 Col8a2P25318 699 aa3.52□□□□□ -1.85
Clk1-201ENSMUST00000034868 ClcP97400 68 aa3.52□□□□□ -1.85
Clk1-201ENSMUST00000034868 FshbQ60687 130 aa3.52□□□□□ -1.85
Clk1-201ENSMUST00000034868 Cmc4Q61908 68 aa3.52□□□□□ -1.85
Clk1-201ENSMUST00000034868 Dpm3Q9D1Q4 92 aa3.52□□□□□ -1.85
Clk1-201ENSMUST00000034868 Ighv1-11A0A0A6YWI9 117 aa3.51□□□□□ -1.85
Clk1-201ENSMUST00000034868 Gm21983D6RFS9 131 aa3.51□□□□□ -1.85
Clk1-201ENSMUST00000034868 P84751 237 aa3.51□□□□□ -1.85
Clk1-201ENSMUST00000034868 Q5BN45 167 aa3.51□□□□□ -1.85
Clk1-201ENSMUST00000034868 Igkv1-133A0A0B4J1H8 120 aa3.51□□□□□ -1.85
Clk1-201ENSMUST00000034868 Igkv14-111A0A140T8P9 117 aa3.51□□□□□ -1.85
Clk1-201ENSMUST00000034868 Gm37988J3QM41 62 aa3.51□□□□□ -1.85
Clk1-201ENSMUST00000034868 Atox1O08997 68 aaKnown RBP3.51□□□□□ -1.85
Clk1-201ENSMUST00000034868 Reg3gO09049 174 aa3.51□□□□□ -1.85
Clk1-201ENSMUST00000034868 P0C1Z5 52 aa3.51□□□□□ -1.85
Clk1-201ENSMUST00000034868 Mrpl36Q99N90 102 aa3.51□□□□□ -1.85
Clk1-201ENSMUST00000034868 Dock10Q8BZN6 2150 aa3.5□□□□□ -1.85
Clk1-201ENSMUST00000034868 Sptbn2Q68FG2 2388 aa3.5□□□□□ -1.85
Clk1-201ENSMUST00000034868 Cep250Q60952 2414 aa3.5□□□□□ -1.85
Clk1-201ENSMUST00000034868 Ighv7-3A0A075B5R2 120 aa3.5□□□□□ -1.85
Clk1-201ENSMUST00000034868 C920008G01RikA0A0B4J1N1 112 aa3.5□□□□□ -1.85
Clk1-201ENSMUST00000034868 Trbv13-2A0A140T8N6 113 aa3.5□□□□□ -1.85
Clk1-201ENSMUST00000034868 Gm16181B0V2H2 73 aa3.5□□□□□ -1.85
Clk1-201ENSMUST00000034868 Crip1P63254 77 aa3.5□□□□□ -1.85
Clk1-201ENSMUST00000034868 Lypd1Q8BLC3 141 aa3.5□□□□□ -1.85
Clk1-201ENSMUST00000034868 D730048I06RikQ9CQB8 106 aa3.5□□□□□ -1.85
Clk1-201ENSMUST00000034868 Immp1lQ9CQU8 166 aa3.5□□□□□ -1.85
Clk1-201ENSMUST00000034868 Tmem167aQ9CR64 72 aa3.5□□□□□ -1.85
Clk1-201ENSMUST00000034868 Znf580Q9DB38 172 aa3.5□□□□□ -1.85
Clk1-201ENSMUST00000034868 Usp9xP70398 2559 aaKnown RBP3.5□□□□□ -1.85
Clk1-201ENSMUST00000034868 CntrlA2AL36 2334 aa3.49□□□□□ -1.85
Clk1-201ENSMUST00000034868 F8Q06194 2319 aa3.49□□□□□ -1.85
Clk1-201ENSMUST00000034868 Ighv2-7A0A075B5Q8 116 aa3.49□□□□□ -1.85
Clk1-201ENSMUST00000034868 Ighv8-13A0A075B5Y0 101 aa3.49□□□□□ -1.85
Clk1-201ENSMUST00000034868 Trav9-1A0A075B601 112 aa3.49□□□□□ -1.85
Clk1-201ENSMUST00000034868 Defb2P82020 71 aa3.49□□□□□ -1.85
Clk1-201ENSMUST00000034868 ErhP84089 104 aa3.49□□□□□ -1.85
Clk1-201ENSMUST00000034868 Ndufa4l2Q4FZG9 87 aa3.49□□□□□ -1.85
Clk1-201ENSMUST00000034868 Gm9945Q8BNZ3 91 aa3.49□□□□□ -1.85
Clk1-201ENSMUST00000034868 Fxyd4Q9D2W0 88 aa3.49□□□□□ -1.85
Clk1-201ENSMUST00000034868 Fbn1Q61554 2873 aaKnown RBP3.49□□□□□ -1.85
Clk1-201ENSMUST00000034868 FasnP19096 2504 aaKnown RBP3.49□□□□□ -1.85
Clk1-201ENSMUST00000034868 Ighv1-72P01751 139 aa3.48□□□□□ -1.85
Clk1-201ENSMUST00000034868 Cd24P24807 76 aa3.48□□□□□ -1.85
Clk1-201ENSMUST00000034868 Higd1cQ76I25 96 aa3.48□□□□□ -1.85
Clk1-201ENSMUST00000034868 Defb6Q91VD6 63 aa3.48□□□□□ -1.85
Clk1-201ENSMUST00000034868 HampQ9EQ21 83 aa3.48□□□□□ -1.85
Clk1-201ENSMUST00000034868 Muc2Q80Z19 2680 aa3.48□□□□□ -1.85
Clk1-201ENSMUST00000034868 Tenm3Q9WTS6 2715 aa3.48□□□□□ -1.85
Clk1-201ENSMUST00000034868 AtmQ62388 3066 aa3.48□□□□□ -1.85
Clk1-201ENSMUST00000034868 Arhgap32Q811P8 2089 aa3.48□□□□□ -1.85
Clk1-201ENSMUST00000034868 P01806 116 aa3.48□□□□□ -1.85
Clk1-201ENSMUST00000034868 P18530 117 aa3.48□□□□□ -1.85
Clk1-201ENSMUST00000034868 Znf239P24399 201 aa3.48□□□□□ -1.85
Clk1-201ENSMUST00000034868 Acyp1P56376 99 aa3.48□□□□□ -1.85
Clk1-201ENSMUST00000034868 Pate4Q09098 99 aa3.48□□□□□ -1.85
Clk1-201ENSMUST00000034868 Odf3l2Q3TZ65 277 aa3.48□□□□□ -1.85
Clk1-201ENSMUST00000034868 Fam216bQ8CC14 138 aa3.48□□□□□ -1.85
Clk1-201ENSMUST00000034868 Plce1Q8K4S1 2282 aa3.47□□□□□ -1.85
Clk1-201ENSMUST00000034868 Ighv12-3A0A075B5T1 117 aa3.47□□□□□ -1.85
Clk1-201ENSMUST00000034868 Ighv1-23A0A0A6YVW3 117 aa3.47□□□□□ -1.85
Clk1-201ENSMUST00000034868 Iglv3A0A0B4J1K5 122 aa3.47□□□□□ -1.85
Clk1-201ENSMUST00000034868 Gm10542F6XDR3 90 aa3.47□□□□□ -1.85
Clk1-201ENSMUST00000034868 P01738 130 aa3.47□□□□□ -1.85
Clk1-201ENSMUST00000034868 P01823 113 aa3.47□□□□□ -1.85
Clk1-201ENSMUST00000034868 Phxr4P15974 95 aa3.47□□□□□ -1.85
Clk1-201ENSMUST00000034868 AngP21570 145 aa3.47□□□□□ -1.85
Clk1-201ENSMUST00000034868 Pde6hP61249 83 aa3.47□□□□□ -1.85
Clk1-201ENSMUST00000034868 B9d2Q3UK10 175 aa3.47□□□□□ -1.85
Clk1-201ENSMUST00000034868 Ndufa4Q62425 82 aaKnown RBP3.47□□□□□ -1.85
Clk1-201ENSMUST00000034868 Gm16485Q8C4B7 115 aa3.47□□□□□ -1.85
Clk1-201ENSMUST00000034868 Fstl3Q9EQC7 256 aa3.47□□□□□ -1.85
Clk1-201ENSMUST00000034868 Col7a1Q63870 2944 aa3.47□□□□□ -1.85
Clk1-201ENSMUST00000034868 CadB2RQC6 2225 aa3.47□□□□□ -1.85
Clk1-201ENSMUST00000034868 Cfap54Q8C6S9 3106 aa3.46□□□□□ -1.85
Clk1-201ENSMUST00000034868 Ighv5-6A0A075B5Q0 117 aa3.46□□□□□ -1.86
Clk1-201ENSMUST00000034868 Trav9-4A0A0B4J1K2 113 aa3.46□□□□□ -1.86
Clk1-201ENSMUST00000034868 Ighv1-69A0A0G2JFS5 117 aa3.46□□□□□ -1.86
Clk1-201ENSMUST00000034868 Trav9d-4A0A0G2JG37 103 aa3.46□□□□□ -1.86
Retrieved 100 of 22,080 RNA–protein pairs in 20.7 ms