RNA–Protein interactions for RNA: ENSMUST00000034245.15

Usb1-201, Transcript of U6 snRNA phosphodiesterase, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usb1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1-201ENSMUST00000034245 Prh1P05142 261 aa11.32□□□□□ -0.6
Usb1-201ENSMUST00000034245 Sprr1bQ62267 153 aa11.32□□□□□ -0.6
Usb1-201ENSMUST00000034245 EnhoQ8K1D8 76 aa11.32□□□□□ -0.6
Usb1-201ENSMUST00000034245 Mfap4Q9D1H9 257 aa11.32□□□□□ -0.6
Usb1-201ENSMUST00000034245 Trav13d-4A0A0G2JFX3 110 aa11.31□□□□□ -0.6
Usb1-201ENSMUST00000034245 Gm9508A0A1W2P7W0 230 aa11.31□□□□□ -0.6
Usb1-201ENSMUST00000034245 Dnah3Q8BW94 4083 aa11.31□□□□□ -0.6
Usb1-201ENSMUST00000034245 Plscr4P58196 326 aa11.31□□□□□ -0.6
Usb1-201ENSMUST00000034245 Trav9n-4A0A075B631 113 aa11.3□□□□□ -0.6
Usb1-201ENSMUST00000034245 Gm9242J3QNY1 357 aa11.3□□□□□ -0.6
Usb1-201ENSMUST00000034245 P01823 113 aa11.3□□□□□ -0.6
Usb1-201ENSMUST00000034245 Triap1Q9D8Z2 76 aa11.3□□□□□ -0.6
Usb1-201ENSMUST00000034245 Iglc1A0A0G2JE99 106 aa11.29□□□□□ -0.6
Usb1-201ENSMUST00000034245 P01843 105 aa11.29□□□□□ -0.6
Usb1-201ENSMUST00000034245 4930442H23RikQ9D5G7 103 aa11.29□□□□□ -0.6
Usb1-201ENSMUST00000034245 Trav11A0A0B4J1J9 114 aa11.27□□□□□ -0.61
Usb1-201ENSMUST00000034245 Gemin7Q9CWY4 129 aa11.27□□□□□ -0.61
Usb1-201ENSMUST00000034245 Fgf23Q9EPC2 251 aa11.27□□□□□ -0.61
Usb1-201ENSMUST00000034245 Zfand2aQ9JII7 171 aa11.27□□□□□ -0.61
Usb1-201ENSMUST00000034245 Gm20730A0A075B5J6 119 aa11.26□□□□□ -0.61
Usb1-201ENSMUST00000034245 Insl3O09107 122 aa11.26□□□□□ -0.61
Usb1-201ENSMUST00000034245 Ighv13-2A0A0A6YWN3 119 aa11.26□□□□□ -0.61
Usb1-201ENSMUST00000034245 Krtap11-1E9Q2E9 183 aa11.26□□□□□ -0.61
Usb1-201ENSMUST00000034245 Ighv1-61P01749 117 aa11.26□□□□□ -0.61
Usb1-201ENSMUST00000034245 SpinklQ8CEK3 90 aa11.26□□□□□ -0.61
Usb1-201ENSMUST00000034245 Gm35549A0A0N4SUS7 141 aa11.25□□□□□ -0.61
Usb1-201ENSMUST00000034245 MturnQ8CGA4 131 aa11.25□□□□□ -0.61
Usb1-201ENSMUST00000034245 Pkd1l1Q8R526 2615 aa11.24□□□□□ -0.61
Usb1-201ENSMUST00000034245 Trav4-3A0A0B4J1K1 110 aa11.24□□□□□ -0.61
Usb1-201ENSMUST00000034245 Tmem238A9JSM3 176 aa11.24□□□□□ -0.61
Usb1-201ENSMUST00000034245 Gm11213A0A1B0GR83 88 aa11.23□□□□□ -0.61
Usb1-201ENSMUST00000034245 Gm6812B1AXU1 112 aa11.23□□□□□ -0.61
Usb1-201ENSMUST00000034245 Lect2O88803 151 aa11.23□□□□□ -0.61
Usb1-201ENSMUST00000034245 Muc6Q80T03 2850 aa11.23□□□□□ -0.61
Usb1-201ENSMUST00000034245 Dnah17Q69Z23 4481 aa11.23□□□□□ -0.61
Usb1-201ENSMUST00000034245 Gm26602M0QWA4 95 aa11.23□□□□□ -0.61
Usb1-201ENSMUST00000034245 Defa13P50711 93 aa11.23□□□□□ -0.61
Usb1-201ENSMUST00000034245 Tac4Q99N14 128 aa11.23□□□□□ -0.61
Usb1-201ENSMUST00000034245 Q9DAQ5 155 aa11.23□□□□□ -0.61
Usb1-201ENSMUST00000034245 P01896 185 aa11.22□□□□□ -0.61
Usb1-201ENSMUST00000034245 Prss58Q8BW11 241 aa11.22□□□□□ -0.61
Usb1-201ENSMUST00000034245 Gm26727M0QWT1 121 aa11.21□□□□□ -0.61
Usb1-201ENSMUST00000034245 Mtatp8P03930 67 aa11.21□□□□□ -0.61
Usb1-201ENSMUST00000034245 Rmi2Q3UPE3 149 aa11.21□□□□□ -0.61
Usb1-201ENSMUST00000034245 Srsf9Q9D0B0 222 aaKnown RBP11.21□□□□□ -0.61
Usb1-201ENSMUST00000034245 2310061N02RikQ9D6S9 174 aa11.21□□□□□ -0.61
Usb1-201ENSMUST00000034245 Gm16485Q8C4B7 115 aa11.21□□□□□ -0.62
Usb1-201ENSMUST00000034245 Pgpep1Q9ESW8 209 aa11.2□□□□□ -0.62
Usb1-201ENSMUST00000034245 Defa15P50713 93 aa11.19□□□□□ -0.62
Usb1-201ENSMUST00000034245 Tmem86bQ497J1 226 aa11.19□□□□□ -0.62
Usb1-201ENSMUST00000034245 Morn5Q9DAI9 170 aa11.19□□□□□ -0.62
Usb1-201ENSMUST00000034245 C920008G01RikA0A0B4J1N1 112 aa11.18□□□□□ -0.62
Usb1-201ENSMUST00000034245 Ccl25O35903 144 aa11.18□□□□□ -0.62
Usb1-201ENSMUST00000034245 Cks1bP61025 79 aa11.18□□□□□ -0.62
Usb1-201ENSMUST00000034245 Cited1P97769 203 aa11.18□□□□□ -0.62
Usb1-201ENSMUST00000034245 Vps25Q9CQ80 176 aa11.18□□□□□ -0.62
Usb1-201ENSMUST00000034245 4930432M17RikQ3V0W9 174 aa11.18□□□□□ -0.62
Usb1-201ENSMUST00000034245 Rpl24Q8BP67 157 aaKnown RBP11.18□□□□□ -0.62
Usb1-201ENSMUST00000034245 Huwe1Q7TMY8 4377 aaKnown RBP11.18□□□□□ -0.62
Usb1-201ENSMUST00000034245 Gm6793B2RXM2 351 aa11.17□□□□□ -0.62
Usb1-201ENSMUST00000034245 Mzt1Q8BUR9 78 aa11.17□□□□□ -0.62
Usb1-201ENSMUST00000034245 Gm5617Q91VN2 117 aa11.17□□□□□ -0.62
Usb1-201ENSMUST00000034245 Tspan13Q9D8C2 204 aa11.17□□□□□ -0.62
Usb1-201ENSMUST00000034245 Defb50Q6TU36 73 aa11.16□□□□□ -0.62
Usb1-201ENSMUST00000034245 Trav4d-3A0A075B625 110 aa11.15□□□□□ -0.62
Usb1-201ENSMUST00000034245 Timm17bQ9Z0V7 172 aa11.15□□□□□ -0.62
Usb1-201ENSMUST00000034245 Stab2Q8R4U0 2559 aa11.15□□□□□ -0.63
Usb1-201ENSMUST00000034245 Tenm2Q9WTS5 2764 aa11.14□□□□□ -0.63
Usb1-201ENSMUST00000034245 Ighv1-56A0A0A6YXG2 117 aa11.13□□□□□ -0.63
Usb1-201ENSMUST00000034245 Igkv8-24A0A140T8P5 121 aa11.13□□□□□ -0.63
Usb1-201ENSMUST00000034245 Ndufa12Q7TMF3 145 aaKnown RBP11.13□□□□□ -0.63
Usb1-201ENSMUST00000034245 1700010B08RikQ9DAI7 102 aa11.13□□□□□ -0.63
Usb1-201ENSMUST00000034245 Trav9d-4A0A0G2JG37 103 aa11.12□□□□□ -0.63
Usb1-201ENSMUST00000034245 P01755 137 aa11.12□□□□□ -0.63
Usb1-201ENSMUST00000034245 Spink13Q3UTS8 97 aa11.12□□□□□ -0.63
Usb1-201ENSMUST00000034245 4930544G11RikQ9CR99 193 aa11.12□□□□□ -0.63
Usb1-201ENSMUST00000034245 CckP09240 115 aa11.11□□□□□ -0.63
Usb1-201ENSMUST00000034245 Pxt1Q8K459 51 aa11.11□□□□□ -0.63
Usb1-201ENSMUST00000034245 FasnP19096 2504 aaKnown RBP11.11□□□□□ -0.63
Usb1-201ENSMUST00000034245 Gm9507D3Z5T3 223 aa11.11□□□□□ -0.63
Usb1-201ENSMUST00000034245 Cops9Q3U898 57 aa11.11□□□□□ -0.63
Usb1-201ENSMUST00000034245 Csmd3Q80T79 3707 aa11.09□□□□□ -0.63
Usb1-201ENSMUST00000034245 Ighv2-9A0A075B5Q5 116 aa11.09□□□□□ -0.63
Usb1-201ENSMUST00000034245 Gm867A0A1W2P7T4 151 aa11.09□□□□□ -0.63
Usb1-201ENSMUST00000034245 Cox7b2Q9D2H1 82 aa11.09□□□□□ -0.63
Usb1-201ENSMUST00000034245 Gm45213A0A0U1RNZ6 101 aa11.08□□□□□ -0.64
Usb1-201ENSMUST00000034245 Dppa2Q9CWH0 301 aa11.08□□□□□ -0.64
Usb1-201ENSMUST00000034245 4930556J24RikQ9D4U7 146 aa11.08□□□□□ -0.64
Usb1-201ENSMUST00000034245 Slamf6Q9ET39 351 aa11.08□□□□□ -0.64
Usb1-201ENSMUST00000034245 Ly6g6cQ9Z1Q4 126 aa11.08□□□□□ -0.64
Usb1-201ENSMUST00000034245 Gm26920S4R2A5 56 aa11.08□□□□□ -0.64
Usb1-201ENSMUST00000034245 Dnah1E9Q8T7 4250 aa11.07□□□□□ -0.64
Usb1-201ENSMUST00000034245 B230359F08RikA0A0B4J1K3 109 aa11.07□□□□□ -0.64
Usb1-201ENSMUST00000034245 Defa3P28310 93 aa11.07□□□□□ -0.64
Usb1-201ENSMUST00000034245 Defa10P50708 93 aa11.07□□□□□ -0.64
Usb1-201ENSMUST00000034245 Tcl1b5P56845 121 aa11.07□□□□□ -0.64
Usb1-201ENSMUST00000034245 Cox8cA6H666 72 aa11.06□□□□□ -0.64
Usb1-201ENSMUST00000034245 1700011M02RikB1AX35 88 aa11.06□□□□□ -0.64
Usb1-201ENSMUST00000034245 Rpl32-psP17932 135 aa11.06□□□□□ -0.64
Usb1-201ENSMUST00000034245 Gm9918Q8BUR5 174 aa11.06□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 52.4 ms