RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 MalO09198 153 aa8.81□□□□□ -1
Rnf4-201ENSMUST00000030992 CrygdP04342 174 aa8.81□□□□□ -1
Rnf4-201ENSMUST00000030992 CrygeQ03740 174 aa8.81□□□□□ -1
Rnf4-201ENSMUST00000030992 Trav13d-4A0A0G2JFX3 110 aa8.8□□□□□ -1
Rnf4-201ENSMUST00000030992 A830031A19RikQ8BNT5 113 aa8.8□□□□□ -1
Rnf4-201ENSMUST00000030992 Ighv2-9-1A0A075B697 116 aa8.79□□□□□ -1
Rnf4-201ENSMUST00000030992 SelenowP63300 88 aa8.79□□□□□ -1
Rnf4-201ENSMUST00000030992 SpinklQ8CEK3 90 aa8.79□□□□□ -1
Rnf4-201ENSMUST00000030992 Q8R092 253 aa8.79□□□□□ -1
Rnf4-201ENSMUST00000030992 P01755 137 aa8.79□□□□□ -1
Rnf4-201ENSMUST00000030992 Gm10647E9Q8X0 124 aa8.79□□□□□ -1
Rnf4-201ENSMUST00000030992 Spata45Q9CVW4 97 aa8.79□□□□□ -1
Rnf4-201ENSMUST00000030992 Vmo1Q5SXG7 201 aa8.78□□□□□ -1
Rnf4-201ENSMUST00000030992 PemtQ61907 199 aa8.78□□□□□ -1
Rnf4-201ENSMUST00000030992 Tmem223Q9CQE2 199 aaKnown RBP8.78□□□□□ -1
Rnf4-201ENSMUST00000030992 Myo18bE9PV66 2605 aa8.77□□□□□ -1
Rnf4-201ENSMUST00000030992 Rpl28P41105 137 aaKnown RBP8.77□□□□□ -1.01
Rnf4-201ENSMUST00000030992 Gm904Q3V2L5 102 aa8.77□□□□□ -1.01
Rnf4-201ENSMUST00000030992 4930544G11RikQ9CR99 193 aa8.77□□□□□ -1.01
Rnf4-201ENSMUST00000030992 Wdr38Q9D994 303 aa8.77□□□□□ -1.01
Rnf4-201ENSMUST00000030992 Scgb1b24B1B0N6 92 aa8.77□□□□□ -1.01
Rnf4-201ENSMUST00000030992 PrcdQ00LT2 53 aa8.77□□□□□ -1.01
Rnf4-201ENSMUST00000030992 Gm10767Q3TQP0 103 aa8.77□□□□□ -1.01
Rnf4-201ENSMUST00000030992 Cmc4Q61908 68 aa8.77□□□□□ -1.01
Rnf4-201ENSMUST00000030992 Dand5Q76LW6 185 aa8.77□□□□□ -1.01
Rnf4-201ENSMUST00000030992 D730001G18RikA0A087WQU7 115 aa8.76□□□□□ -1.01
Rnf4-201ENSMUST00000030992 Setd2E9Q5F9 2537 aa8.76□□□□□ -1.01
Rnf4-201ENSMUST00000030992 Igkv6-13A0A0G2JGY3 119 aa8.76□□□□□ -1.01
Rnf4-201ENSMUST00000030992 Igkv1-117A0A140T8M0 119 aa8.76□□□□□ -1.01
Rnf4-201ENSMUST00000030992 1700020N15RikL7MTX3 112 aa8.75□□□□□ -1.01
Rnf4-201ENSMUST00000030992 Foxc1Q61572 553 aa8.75□□□□□ -1.01
Rnf4-201ENSMUST00000030992 Pfn2Q9JJV2 140 aa8.75□□□□□ -1.01
Rnf4-201ENSMUST00000030992 Trbv13-2A0A140T8N6 113 aa8.75□□□□□ -1.01
Rnf4-201ENSMUST00000030992 TeppQ6IMH0 216 aa8.75□□□□□ -1.01
Rnf4-201ENSMUST00000030992 Leap2Q91V13 76 aa8.75□□□□□ -1.01
Rnf4-201ENSMUST00000030992 CicQ924A2 2510 aa8.74□□□□□ -1.01
Rnf4-201ENSMUST00000030992 B230359F08RikA0A0B4J1K3 109 aa8.74□□□□□ -1.01
Rnf4-201ENSMUST00000030992 Znf414Q9DCK4 299 aa8.74□□□□□ -1.01
Rnf4-201ENSMUST00000030992 Znf740Q6NZQ6 180 aa8.73□□□□□ -1.01
Rnf4-201ENSMUST00000030992 Ndufa12Q7TMF3 145 aaKnown RBP8.73□□□□□ -1.01
Rnf4-201ENSMUST00000030992 Tmem213Q08EA8 116 aa8.73□□□□□ -1.01
Rnf4-201ENSMUST00000030992 Igkv1-99F6XWB2 120 aa8.72□□□□□ -1.01
Rnf4-201ENSMUST00000030992 Cks1bP61025 79 aa8.72□□□□□ -1.01
Rnf4-201ENSMUST00000030992 Anapc13Q8R034 74 aa8.71□□□□□ -1.02
Rnf4-201ENSMUST00000030992 P01896 185 aa8.71□□□□□ -1.02
Rnf4-201ENSMUST00000030992 Pglyrp4Q0VB07 374 aa8.71□□□□□ -1.02
Rnf4-201ENSMUST00000030992 Dad1P61804 113 aa8.7□□□□□ -1.02
Rnf4-201ENSMUST00000030992 Bles03Q8VD62 251 aa8.7□□□□□ -1.02
Rnf4-201ENSMUST00000030992 Xlr5cQ9JJR2 179 aa8.7□□□□□ -1.02
Rnf4-201ENSMUST00000030992 Esm1Q9QYY7 184 aa8.7□□□□□ -1.02
Rnf4-201ENSMUST00000030992 Tenm1Q9WTS4 2731 aa8.69□□□□□ -1.02
Rnf4-201ENSMUST00000030992 4930524J08RikQ9CUJ5 163 aa8.69□□□□□ -1.02
Rnf4-201ENSMUST00000030992 Nbeal2Q6ZQA0 2742 aa8.69□□□□□ -1.02
Rnf4-201ENSMUST00000030992 C530025M09RikF6RGA8 229 aa8.68□□□□□ -1.02
Rnf4-201ENSMUST00000030992 Lyrm7Q9DA03 104 aa8.68□□□□□ -1.02
Rnf4-201ENSMUST00000030992 Kmt2aP55200 3966 aa8.68□□□□□ -1.02
Rnf4-201ENSMUST00000030992 Trav9n-4A0A075B631 113 aa8.68□□□□□ -1.02
Rnf4-201ENSMUST00000030992 Higd2aQ9CQJ1 106 aa8.68□□□□□ -1.02
Rnf4-201ENSMUST00000030992 Tex15F8VPN2 2785 aa8.68□□□□□ -1.02
Rnf4-201ENSMUST00000030992 5730596B20RikQ8BQ08 205 aa8.67□□□□□ -1.02
Rnf4-201ENSMUST00000030992 Spry2Q9QXV8 315 aa8.67□□□□□ -1.02
Rnf4-201ENSMUST00000030992 Igkv3-9A0A140T8P4 119 aa8.67□□□□□ -1.02
Rnf4-201ENSMUST00000030992 Ighv1-56A0A0A6YXG2 117 aa8.67□□□□□ -1.02
Rnf4-201ENSMUST00000030992 Acyp1P56376 99 aa8.67□□□□□ -1.02
Rnf4-201ENSMUST00000030992 Mzt1Q8BUR9 78 aa8.67□□□□□ -1.02
Rnf4-201ENSMUST00000030992 MrapQ9D159 127 aa8.67□□□□□ -1.02
Rnf4-201ENSMUST00000030992 Prh1P05142 261 aa8.66□□□□□ -1.02
Rnf4-201ENSMUST00000030992 Prss58Q8BW11 241 aa8.66□□□□□ -1.02
Rnf4-201ENSMUST00000030992 Tcl1b3P56842 122 aa8.66□□□□□ -1.02
Rnf4-201ENSMUST00000030992 Defb29Q8BGW9 78 aa8.66□□□□□ -1.02
Rnf4-201ENSMUST00000030992 Klk11Q9QYN3 276 aa8.66□□□□□ -1.02
Rnf4-201ENSMUST00000030992 Trav13-1A0A075B644 110 aa8.65□□□□□ -1.02
Rnf4-201ENSMUST00000030992 Gm16381A0A1Y7VKT9 73 aa8.65□□□□□ -1.02
Rnf4-201ENSMUST00000030992 Igkv1-35A0A0G2JDE5 120 aa8.65□□□□□ -1.03
Rnf4-201ENSMUST00000030992 Gm10251J3QPM5 127 aa8.65□□□□□ -1.03
Rnf4-201ENSMUST00000030992 Ighv8-13A0A075B5Y0 101 aa8.64□□□□□ -1.03
Rnf4-201ENSMUST00000030992 Krtap11-1E9Q2E9 183 aa8.64□□□□□ -1.03
Rnf4-201ENSMUST00000030992 Atp5eP56382 52 aa8.63□□□□□ -1.03
Rnf4-201ENSMUST00000030992 Ighv8-11A0A075B5X4 119 aa8.63□□□□□ -1.03
Rnf4-201ENSMUST00000030992 Gm867A0A1W2P7T4 151 aa8.63□□□□□ -1.03
Rnf4-201ENSMUST00000030992 Pcp4P63054 62 aa8.63□□□□□ -1.03
Rnf4-201ENSMUST00000030992 Tmem86bQ497J1 226 aa8.63□□□□□ -1.03
Rnf4-201ENSMUST00000030992 Gm5142Q8C5X9 133 aa8.63□□□□□ -1.03
Rnf4-201ENSMUST00000030992 Trav14d-3-dv8A0A075B619 120 aa8.62□□□□□ -1.03
Rnf4-201ENSMUST00000030992 Igkv8-18A0A0B4J1J3 123 aa8.62□□□□□ -1.03
Rnf4-201ENSMUST00000030992 Gm5153P01627 120 aa8.62□□□□□ -1.03
Rnf4-201ENSMUST00000030992 Smim26Q3V460 107 aa8.62□□□□□ -1.03
Rnf4-201ENSMUST00000030992 Brwd1Q921C3 2304 aa8.62□□□□□ -1.03
Rnf4-201ENSMUST00000030992 Gm10845Q3UNY9 185 aa8.62□□□□□ -1.03
Rnf4-201ENSMUST00000030992 Csdc2Q91YQ3 154 aa8.62□□□□□ -1.03
Rnf4-201ENSMUST00000030992 Hivep3A2A884 2348 aa8.61□□□□□ -1.03
Rnf4-201ENSMUST00000030992 Itpr2Q9Z329 2701 aa8.61□□□□□ -1.03
Rnf4-201ENSMUST00000030992 Gm11213A0A1B0GR83 88 aa8.61□□□□□ -1.03
Rnf4-201ENSMUST00000030992 2010109I03RikQ9CQ11 111 aa8.61□□□□□ -1.03
Rnf4-201ENSMUST00000030992 P01819 144 aa8.6□□□□□ -1.03
Rnf4-201ENSMUST00000030992 Tcl1b5P56845 121 aa8.6□□□□□ -1.03
Rnf4-201ENSMUST00000030992 Trav3-4A0A075B654 114 aa8.6□□□□□ -1.03
Rnf4-201ENSMUST00000030992 1810062G17RikG3X8Y2 129 aa8.6□□□□□ -1.03
Rnf4-201ENSMUST00000030992 Ighv2-9A0A075B5Q5 116 aa8.59□□□□□ -1.03
Rnf4-201ENSMUST00000030992 Trav13n-2A0A0G2JF93 110 aa8.59□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 92.3 ms