RNA–Protein interactions for RNA: ENSMUST00000029480.8

Prpf38b-201, Transcript of Pre-mRNA-splicing factor 38B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf38b, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38b-201ENSMUST00000029480 5730596B20RikQ8BQ08 205 aa9.56□□□□□ -0.88
Prpf38b-201ENSMUST00000029480 Gm29666A0A087WQ99 126 aa9.55□□□□□ -0.88
Prpf38b-201ENSMUST00000029480 SnurfQ9WU12 71 aa9.55□□□□□ -0.88
Prpf38b-201ENSMUST00000029480 FlnaQ8BTM8 2647 aaKnown RBP9.55□□□□□ -0.88
Prpf38b-201ENSMUST00000029480 C920008G01RikA0A0B4J1N1 112 aa9.55□□□□□ -0.88
Prpf38b-201ENSMUST00000029480 Gm35549A0A0N4SUS7 141 aa9.55□□□□□ -0.88
Prpf38b-201ENSMUST00000029480 Trav9-2A0A075B647 113 aa9.54□□□□□ -0.88
Prpf38b-201ENSMUST00000029480 Trav9-4A0A0B4J1K2 113 aa9.54□□□□□ -0.88
Prpf38b-201ENSMUST00000029480 Gm21748Q3UE70 102 aa9.54□□□□□ -0.88
Prpf38b-201ENSMUST00000029480 Krtap16-1A2A5X5 502 aa9.54□□□□□ -0.88
Prpf38b-201ENSMUST00000029480 A930002H24RikQ8C8Y3 163 aa9.54□□□□□ -0.88
Prpf38b-201ENSMUST00000029480 Spry2Q9QXV8 315 aa9.54□□□□□ -0.88
Prpf38b-201ENSMUST00000029480 OdaphJ3QNT8 126 aa9.53□□□□□ -0.88
Prpf38b-201ENSMUST00000029480 Xcl1P47993 114 aa9.53□□□□□ -0.88
Prpf38b-201ENSMUST00000029480 Gm10577Q3UDV9 132 aa9.53□□□□□ -0.88
Prpf38b-201ENSMUST00000029480 Zc2hc1bQ9D534 172 aa9.53□□□□□ -0.88
Prpf38b-201ENSMUST00000029480 1700010B08RikQ9DAI7 102 aa9.53□□□□□ -0.88
Prpf38b-201ENSMUST00000029480 CubnQ9JLB4 3623 aa9.53□□□□□ -0.88
Prpf38b-201ENSMUST00000029480 Znf740Q6NZQ6 180 aa9.52□□□□□ -0.89
Prpf38b-201ENSMUST00000029480 Notch3Q61982 2318 aa9.52□□□□□ -0.89
Prpf38b-201ENSMUST00000029480 Defa28D3Z1V9 94 aa9.52□□□□□ -0.89
Prpf38b-201ENSMUST00000029480 Reg3gO09049 174 aa9.52□□□□□ -0.89
Prpf38b-201ENSMUST00000029480 4930546C10RikE9Q4Y3 121 aa9.51□□□□□ -0.89
Prpf38b-201ENSMUST00000029480 Gm9887F6RFI0 207 aa9.51□□□□□ -0.89
Prpf38b-201ENSMUST00000029480 Defb42Q8BVB5 75 aa9.51□□□□□ -0.89
Prpf38b-201ENSMUST00000029480 Ndufs7Q9DC70 224 aa9.51□□□□□ -0.89
Prpf38b-201ENSMUST00000029480 Mrpl35Q9CQL6 188 aa9.5□□□□□ -0.89
Prpf38b-201ENSMUST00000029480 4930535I16RikQ9CUI2 172 aa9.5□□□□□ -0.89
Prpf38b-201ENSMUST00000029480 Pdzd2E9Q1M1 2796 aa9.5□□□□□ -0.89
Prpf38b-201ENSMUST00000029480 Cep192E9Q4Y4 2514 aaKnown RBP9.5□□□□□ -0.89
Prpf38b-201ENSMUST00000029480 Gm7102J3QQ10 178 aa9.5□□□□□ -0.89
Prpf38b-201ENSMUST00000029480 Defb26Q30KN7 186 aa9.5□□□□□ -0.89
Prpf38b-201ENSMUST00000029480 Cmc4Q61908 68 aa9.5□□□□□ -0.89
Prpf38b-201ENSMUST00000029480 P01738 130 aa9.5□□□□□ -0.89
Prpf38b-201ENSMUST00000029480 Fam19a4Q7TPG5 135 aa9.5□□□□□ -0.89
Prpf38b-201ENSMUST00000029480 Wnk1P83741 2377 aa9.49□□□□□ -0.89
Prpf38b-201ENSMUST00000029480 Lect2O88803 151 aa9.49□□□□□ -0.89
Prpf38b-201ENSMUST00000029480 Ppp1r32Q148A4 427 aa9.49□□□□□ -0.89
Prpf38b-201ENSMUST00000029480 Ifitm10Q8BR26 201 aa9.49□□□□□ -0.89
Prpf38b-201ENSMUST00000029480 Trdv5A0A075B661 115 aa9.49□□□□□ -0.89
Prpf38b-201ENSMUST00000029480 Igfn1Q3KNY0 2849 aa9.48□□□□□ -0.89
Prpf38b-201ENSMUST00000029480 Gm29423A0A087WRM1 55 aa9.48□□□□□ -0.89
Prpf38b-201ENSMUST00000029480 P01819 144 aa9.48□□□□□ -0.89
Prpf38b-201ENSMUST00000029480 Cystm1Q8K353 104 aa9.48□□□□□ -0.89
Prpf38b-201ENSMUST00000029480 4930470P17RikQ9D542 155 aa9.47□□□□□ -0.89
Prpf38b-201ENSMUST00000029480 Cd99Q8VCN6 175 aa9.47□□□□□ -0.89
Prpf38b-201ENSMUST00000029480 BsnO88737 3942 aa9.47□□□□□ -0.89
Prpf38b-201ENSMUST00000029480 Chd6A3KFM7 2711 aa9.46□□□□□ -0.89
Prpf38b-201ENSMUST00000029480 Igkv4-91A0A075B5L2 119 aa9.46□□□□□ -0.89
Prpf38b-201ENSMUST00000029480 Tcl1b3P56842 122 aa9.46□□□□□ -0.89
Prpf38b-201ENSMUST00000029480 Rpl36aP83882 106 aaKnown RBP9.46□□□□□ -0.9
Prpf38b-201ENSMUST00000029480 Epg5Q80TA9 2572 aa9.46□□□□□ -0.9
Prpf38b-201ENSMUST00000029480 GfyJ3KML8 504 aa9.45□□□□□ -0.9
Prpf38b-201ENSMUST00000029480 Gm5153P01627 120 aa9.45□□□□□ -0.9
Prpf38b-201ENSMUST00000029480 P84751 237 aa9.45□□□□□ -0.9
Prpf38b-201ENSMUST00000029480 Sox16Q62247 57 aa9.45□□□□□ -0.9
Prpf38b-201ENSMUST00000029480 Spint4Q9D263 159 aa9.45□□□□□ -0.9
Prpf38b-201ENSMUST00000029480 Usp9yF8VPU6 2556 aa9.45□□□□□ -0.9
Prpf38b-201ENSMUST00000029480 Gm815Q3UWS2 115 aa9.45□□□□□ -0.9
Prpf38b-201ENSMUST00000029480 C530025M09RikF6RGA8 229 aa9.44□□□□□ -0.9
Prpf38b-201ENSMUST00000029480 Gm20730A0A075B5J6 119 aa9.44□□□□□ -0.9
Prpf38b-201ENSMUST00000029480 A0A286YE02 88 aa9.43□□□□□ -0.9
Prpf38b-201ENSMUST00000029480 Gm10549Q3URY4 149 aa9.43□□□□□ -0.9
Prpf38b-201ENSMUST00000029480 4930519P11RikQ9CUJ8 166 aa9.43□□□□□ -0.9
Prpf38b-201ENSMUST00000029480 Pet100P0DJE0 76 aa9.43□□□□□ -0.9
Prpf38b-201ENSMUST00000029480 AngP21570 145 aa9.43□□□□□ -0.9
Prpf38b-201ENSMUST00000029480 Sprr1bQ62267 153 aa9.43□□□□□ -0.9
Prpf38b-201ENSMUST00000029480 CdsnQ7TPC1 561 aa9.43□□□□□ -0.9
Prpf38b-201ENSMUST00000029480 Lypd5Q9D7Z7 256 aa9.43□□□□□ -0.9
Prpf38b-201ENSMUST00000029480 Zfp462B1AWL2 2495 aaKnown RBP9.43□□□□□ -0.9
Prpf38b-201ENSMUST00000029480 Tenm3Q9WTS6 2715 aa9.42□□□□□ -0.9
Prpf38b-201ENSMUST00000029480 Sh2d1aO88890 126 aa9.42□□□□□ -0.9
Prpf38b-201ENSMUST00000029480 Lage3Q9CR70 148 aa9.42□□□□□ -0.9
Prpf38b-201ENSMUST00000029480 Gm9513B3GLJ6 99 aa9.42□□□□□ -0.9
Prpf38b-201ENSMUST00000029480 Rmi2Q3UPE3 149 aa9.42□□□□□ -0.9
Prpf38b-201ENSMUST00000029480 Xirp2Q4U4S6 3784 aa9.42□□□□□ -0.9
Prpf38b-201ENSMUST00000029480 Gm7075D3Z497 112 aa9.42□□□□□ -0.9
Prpf38b-201ENSMUST00000029480 Tcl1b5P56845 121 aa9.42□□□□□ -0.9
Prpf38b-201ENSMUST00000029480 Trav13d-1A0A075B606 110 aa9.41□□□□□ -0.9
Prpf38b-201ENSMUST00000029480 Igkv4-78A0A0A6YYE5 119 aa9.41□□□□□ -0.9
Prpf38b-201ENSMUST00000029480 Ube2d4D3YUH6 135 aa9.41□□□□□ -0.9
Prpf38b-201ENSMUST00000029480 Spink4O35679 86 aa9.41□□□□□ -0.9
Prpf38b-201ENSMUST00000029480 B230307C23RikQ8BLB2 64 aa9.41□□□□□ -0.9
Prpf38b-201ENSMUST00000029480 Defa27F2Z403 93 aa9.4□□□□□ -0.9
Prpf38b-201ENSMUST00000029480 CnbpP53996 178 aaKnown RBP9.4□□□□□ -0.9
Prpf38b-201ENSMUST00000029480 Cdc42se2Q8BGH7 84 aa9.4□□□□□ -0.9
Prpf38b-201ENSMUST00000029480 Igkv4-72A0A0B4J1I4 117 aa9.4□□□□□ -0.9
Prpf38b-201ENSMUST00000029480 1700042G07RikB1AUF7 90 aa9.4□□□□□ -0.9
Prpf38b-201ENSMUST00000029480 Gm9767G3X930 207 aa9.4□□□□□ -0.9
Prpf38b-201ENSMUST00000029480 E130114P18RikF6S0S7 154 aa9.39□□□□□ -0.91
Prpf38b-201ENSMUST00000029480 Rbm3O89086 153 aaKnown RBP9.39□□□□□ -0.91
Prpf38b-201ENSMUST00000029480 Acyp1P56376 99 aa9.39□□□□□ -0.91
Prpf38b-201ENSMUST00000029480 Trav11A0A0B4J1J9 114 aa9.39□□□□□ -0.91
Prpf38b-201ENSMUST00000029480 Setd2E9Q5F9 2537 aa9.39□□□□□ -0.91
Prpf38b-201ENSMUST00000029480 Dmbt1Q60997 2085 aa9.39□□□□□ -0.91
Prpf38b-201ENSMUST00000029480 Tfpi2O35536 230 aa9.38□□□□□ -0.91
Prpf38b-201ENSMUST00000029480 Gpha2Q925Q5 128 aa9.38□□□□□ -0.91
Prpf38b-201ENSMUST00000029480 Helz2E9QAM5 2947 aaKnown RBP9.38□□□□□ -0.91
Prpf38b-201ENSMUST00000029480 BC048502Q80Y74 154 aa9.37□□□□□ -0.91
Prpf38b-201ENSMUST00000029480 Ighv2-9-1A0A075B697 116 aa9.37□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 80.7 ms