RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Nsd1O88491 2588 aaKnown RBP9.66□□□□□ -0.86
Rnf4-204ENSMUST00000182047 Gm10251J3QPM5 127 aa9.66□□□□□ -0.86
Rnf4-204ENSMUST00000182047 Cfap126Q6P8X9 189 aa9.66□□□□□ -0.86
Rnf4-204ENSMUST00000182047 4930415O20RikQ8CDT5 131 aa9.66□□□□□ -0.86
Rnf4-204ENSMUST00000182047 P01738 130 aa9.65□□□□□ -0.87
Rnf4-204ENSMUST00000182047 Gata1P17679 413 aa9.65□□□□□ -0.87
Rnf4-204ENSMUST00000182047 GalmQ8K157 342 aa9.65□□□□□ -0.87
Rnf4-204ENSMUST00000182047 Trav7-6A0A075B640 112 aa9.64□□□□□ -0.87
Rnf4-204ENSMUST00000182047 Rpl32-psP17932 135 aa9.64□□□□□ -0.87
Rnf4-204ENSMUST00000182047 Rpl32P62911 135 aaKnown RBP9.64□□□□□ -0.87
Rnf4-204ENSMUST00000182047 Defb42Q8BVB5 75 aa9.64□□□□□ -0.87
Rnf4-204ENSMUST00000182047 Gm9922Q8C3P1 144 aa9.64□□□□□ -0.87
Rnf4-204ENSMUST00000182047 Lgals4Q8K419 326 aa9.63□□□□□ -0.87
Rnf4-204ENSMUST00000182047 Krtap27-1E9PX37 202 aa9.63□□□□□ -0.87
Rnf4-204ENSMUST00000182047 Prp2P05143 317 aa9.63□□□□□ -0.87
Rnf4-204ENSMUST00000182047 Rbmy1bQ60990 380 aa9.63□□□□□ -0.87
Rnf4-204ENSMUST00000182047 Phlda3Q9WV95 125 aa9.63□□□□□ -0.87
Rnf4-204ENSMUST00000182047 Krtap16-1A2A5X5 502 aa9.62□□□□□ -0.87
Rnf4-204ENSMUST00000182047 Nhlrc1Q8BR37 401 aa9.62□□□□□ -0.87
Rnf4-204ENSMUST00000182047 Esm1Q9QYY7 184 aa9.62□□□□□ -0.87
Rnf4-204ENSMUST00000182047 A830031A19RikQ8BNT5 113 aa9.62□□□□□ -0.87
Rnf4-204ENSMUST00000182047 Il19Q8CJ70 176 aa9.62□□□□□ -0.87
Rnf4-204ENSMUST00000182047 Gm10509O88255 85 aa9.61□□□□□ -0.87
Rnf4-204ENSMUST00000182047 Gm10767Q3TQP0 103 aa9.61□□□□□ -0.87
Rnf4-204ENSMUST00000182047 Fn1P11276 2477 aaKnown RBP9.6□□□□□ -0.87
Rnf4-204ENSMUST00000182047 Ighv1-72P01751 139 aa9.6□□□□□ -0.87
Rnf4-204ENSMUST00000182047 RetnQ99P87 114 aa9.6□□□□□ -0.87
Rnf4-204ENSMUST00000182047 Prr13Q9CQJ5 137 aa9.6□□□□□ -0.87
Rnf4-204ENSMUST00000182047 Ighv1-5A0A0A6YWG2 117 aa9.6□□□□□ -0.87
Rnf4-204ENSMUST00000182047 Spink1P09036 80 aa9.59□□□□□ -0.87
Rnf4-204ENSMUST00000182047 Lyrm9Q3UN90 78 aa9.59□□□□□ -0.87
Rnf4-204ENSMUST00000182047 Gm10542F6XDR3 90 aa9.58□□□□□ -0.88
Rnf4-204ENSMUST00000182047 Znf740Q6NZQ6 180 aa9.58□□□□□ -0.88
Rnf4-204ENSMUST00000182047 Trdv5A0A075B661 115 aa9.58□□□□□ -0.88
Rnf4-204ENSMUST00000182047 Trav13n-1A0A0G2JEU8 110 aa9.58□□□□□ -0.88
Rnf4-204ENSMUST00000182047 Q99M08 65 aa9.58□□□□□ -0.88
Rnf4-204ENSMUST00000182047 Glrp1E9Q9S8 174 aa9.57□□□□□ -0.88
Rnf4-204ENSMUST00000182047 P06329 120 aa9.57□□□□□ -0.88
Rnf4-204ENSMUST00000182047 Eif4ebp3Q80VV3 101 aa9.57□□□□□ -0.88
Rnf4-204ENSMUST00000182047 Nop10Q9CQS2 64 aa9.57□□□□□ -0.88
Rnf4-204ENSMUST00000182047 Fgf23Q9EPC2 251 aa9.57□□□□□ -0.88
Rnf4-204ENSMUST00000182047 Gm9887F6RFI0 207 aa9.57□□□□□ -0.88
Rnf4-204ENSMUST00000182047 Igkv4-78A0A0A6YYE5 119 aa9.56□□□□□ -0.88
Rnf4-204ENSMUST00000182047 SpinklQ8CEK3 90 aa9.56□□□□□ -0.88
Rnf4-204ENSMUST00000182047 Wdr38Q9D994 303 aa9.56□□□□□ -0.88
Rnf4-204ENSMUST00000182047 Ly6gP35461 111 aa9.55□□□□□ -0.88
Rnf4-204ENSMUST00000182047 Ube2wQ8VDW4 151 aa9.55□□□□□ -0.88
Rnf4-204ENSMUST00000182047 3110070M22RikQ9DAQ7 118 aa9.55□□□□□ -0.88
Rnf4-204ENSMUST00000182047 Gm10322F7D7I4 111 aa9.54□□□□□ -0.88
Rnf4-204ENSMUST00000182047 Col6a5A6H584 2640 aa9.54□□□□□ -0.88
Rnf4-204ENSMUST00000182047 Gm9747Q810H1 104 aa9.54□□□□□ -0.88
Rnf4-204ENSMUST00000182047 March3Q8BRX9 218 aa9.54□□□□□ -0.88
Rnf4-204ENSMUST00000182047 Ifitm1Q9D103 106 aa9.54□□□□□ -0.88
Rnf4-204ENSMUST00000182047 Gm6793B2RXM2 351 aa9.53□□□□□ -0.88
Rnf4-204ENSMUST00000182047 Prelid3aQ8VE85 172 aa9.53□□□□□ -0.88
Rnf4-204ENSMUST00000182047 Srrm2Q8BTI8 2703 aaKnown RBP9.53□□□□□ -0.88
Rnf4-204ENSMUST00000182047 Gm7257D3YX25 99 aa9.53□□□□□ -0.88
Rnf4-204ENSMUST00000182047 Spry2Q9QXV8 315 aa9.53□□□□□ -0.88
Rnf4-204ENSMUST00000182047 Ighv2-6-8A0A0A6YWY9 116 aa9.52□□□□□ -0.88
Rnf4-204ENSMUST00000182047 Gm9936Q8C864 160 aa9.52□□□□□ -0.88
Rnf4-204ENSMUST00000182047 CrygfQ9CXV3 174 aa9.52□□□□□ -0.88
Rnf4-204ENSMUST00000182047 CenpwQ3URR0 86 aa9.52□□□□□ -0.89
Rnf4-204ENSMUST00000182047 MrapQ9D159 127 aa9.52□□□□□ -0.89
Rnf4-204ENSMUST00000182047 Atp5g1Q9CR84 136 aa9.52□□□□□ -0.89
Rnf4-204ENSMUST00000182047 PolqQ8CGS6 2544 aa9.52□□□□□ -0.89
Rnf4-204ENSMUST00000182047 Tmem101Q91VP7 257 aa9.51□□□□□ -0.89
Rnf4-204ENSMUST00000182047 4930544G11RikQ9CR99 193 aa9.51□□□□□ -0.89
Rnf4-204ENSMUST00000182047 Notch2O35516 2470 aa9.51□□□□□ -0.89
Rnf4-204ENSMUST00000182047 Ly6hQ9WUC3 139 aa9.51□□□□□ -0.89
Rnf4-204ENSMUST00000182047 P01823 113 aa9.5□□□□□ -0.89
Rnf4-204ENSMUST00000182047 Defa1P11477 93 aa9.5□□□□□ -0.89
Rnf4-204ENSMUST00000182047 Cox17P56394 63 aa9.5□□□□□ -0.89
Rnf4-204ENSMUST00000182047 Ndufa3Q9CQ91 84 aa9.5□□□□□ -0.89
Rnf4-204ENSMUST00000182047 Fxyd5P97808 178 aa9.5□□□□□ -0.89
Rnf4-204ENSMUST00000182047 Phpt1Q9DAK9 124 aa9.5□□□□□ -0.89
Rnf4-204ENSMUST00000182047 Ighv1-11A0A0A6YWI9 117 aa9.49□□□□□ -0.89
Rnf4-204ENSMUST00000182047 Gm7138L7N2C3 230 aa9.49□□□□□ -0.89
Rnf4-204ENSMUST00000182047 Fgfbp3Q1HCM0 245 aa9.49□□□□□ -0.89
Rnf4-204ENSMUST00000182047 4930432M17RikQ3V0W9 174 aa9.49□□□□□ -0.89
Rnf4-204ENSMUST00000182047 Morn3Q8C5T4 241 aa9.49□□□□□ -0.89
Rnf4-204ENSMUST00000182047 Gm3238W4VSP7 230 aa9.49□□□□□ -0.89
Rnf4-204ENSMUST00000182047 Cox6cQ9CPQ1 76 aa9.49□□□□□ -0.89
Rnf4-204ENSMUST00000182047 P01729 129 aa9.48□□□□□ -0.89
Rnf4-204ENSMUST00000182047 Dand5Q76LW6 185 aa9.48□□□□□ -0.89
Rnf4-204ENSMUST00000182047 ApcQ61315 2845 aa9.48□□□□□ -0.89
Rnf4-204ENSMUST00000182047 Shisa2Q8QZV2 295 aa9.48□□□□□ -0.89
Rnf4-204ENSMUST00000182047 Xlr5cQ9JJR2 179 aa9.48□□□□□ -0.89
Rnf4-204ENSMUST00000182047 Trav3-4A0A075B654 114 aa9.47□□□□□ -0.89
Rnf4-204ENSMUST00000182047 Igkv4-79A0A075B5L8 119 aa9.47□□□□□ -0.89
Rnf4-204ENSMUST00000182047 CrygdP04342 174 aa9.46□□□□□ -0.89
Rnf4-204ENSMUST00000182047 CrygeQ03740 174 aa9.46□□□□□ -0.89
Rnf4-204ENSMUST00000182047 Foxc1Q61572 553 aa9.46□□□□□ -0.89
Rnf4-204ENSMUST00000182047 Trav9d-3A0A075B695 113 aa9.46□□□□□ -0.9
Rnf4-204ENSMUST00000182047 CirbpP60824 172 aaKnown RBP9.46□□□□□ -0.9
Rnf4-204ENSMUST00000182047 Pglyrp4Q0VB07 374 aa9.46□□□□□ -0.9
Rnf4-204ENSMUST00000182047 Trav9d-4A0A0G2JG37 103 aa9.45□□□□□ -0.9
Rnf4-204ENSMUST00000182047 GfyJ3KML8 504 aa9.45□□□□□ -0.9
Rnf4-204ENSMUST00000182047 Sostdc1Q9CQN4 206 aa9.45□□□□□ -0.9
Rnf4-204ENSMUST00000182047 Trav13-4-dv7A0A075B6C2 110 aa9.45□□□□□ -0.9
Rnf4-204ENSMUST00000182047 Gm36176A0A1W2P8D5 158 aa9.45□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 57 ms