RNA–Protein interactions for RNA: ENSMUST00000171404.7

Gtf3c4-204, Transcript of General transcription factor 3C polypeptide 4, mousemouse

TSL 1 (best) BASIC

Gene Gtf3c4, Length 7,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c4-204ENSMUST00000171404 Gm5629P06327 117 aa11.78□□□□□ -0.52
Gtf3c4-204ENSMUST00000171404 Defb38Q7TNV7 63 aa11.78□□□□□ -0.52
Gtf3c4-204ENSMUST00000171404 PlaurP35456 327 aa11.77□□□□□ -0.52
Gtf3c4-204ENSMUST00000171404 Ube2d3P61079 147 aa11.77□□□□□ -0.52
Gtf3c4-204ENSMUST00000171404 Gpha2Q925Q5 128 aa11.77□□□□□ -0.52
Gtf3c4-204ENSMUST00000171404 Gm1968Q3T9I3 115 aa11.77□□□□□ -0.53
Gtf3c4-204ENSMUST00000171404 SycnQ8VCK7 134 aa11.77□□□□□ -0.53
Gtf3c4-204ENSMUST00000171404 Ighv2-3A0A075B696 115 aa11.77□□□□□ -0.53
Gtf3c4-204ENSMUST00000171404 Ighv1-5A0A0A6YWG2 117 aa11.76□□□□□ -0.53
Gtf3c4-204ENSMUST00000171404 Wfdc6bF6ULY1 148 aa11.76□□□□□ -0.53
Gtf3c4-204ENSMUST00000171404 Ncor1Q60974 2453 aa11.76□□□□□ -0.53
Gtf3c4-204ENSMUST00000171404 Gm16223Q8CBM3 117 aa11.76□□□□□ -0.53
Gtf3c4-204ENSMUST00000171404 Atp5eP56382 52 aa11.75□□□□□ -0.53
Gtf3c4-204ENSMUST00000171404 1600014C23RikQ9DAX4 101 aa11.75□□□□□ -0.53
Gtf3c4-204ENSMUST00000171404 Dkk4Q8VEJ3 221 aa11.75□□□□□ -0.53
Gtf3c4-204ENSMUST00000171404 Rnf185Q91YT2 192 aa11.75□□□□□ -0.53
Gtf3c4-204ENSMUST00000171404 LhbO09108 141 aa11.74□□□□□ -0.53
Gtf3c4-204ENSMUST00000171404 Q9CX25 107 aa11.74□□□□□ -0.53
Gtf3c4-204ENSMUST00000171404 Eif4ebp1Q60876 117 aa11.74□□□□□ -0.53
Gtf3c4-204ENSMUST00000171404 Ramp1Q9WTJ5 148 aa11.74□□□□□ -0.53
Gtf3c4-204ENSMUST00000171404 Ncor2Q9WU42 2472 aaKnown RBP11.74□□□□□ -0.53
Gtf3c4-204ENSMUST00000171404 Smrp1Q2MH31 260 aa11.74□□□□□ -0.53
Gtf3c4-204ENSMUST00000171404 Gm5878E9PUB3 99 aa11.74□□□□□ -0.53
Gtf3c4-204ENSMUST00000171404 Cacna1gQ5SUF7 2381 aa11.73□□□□□ -0.53
Gtf3c4-204ENSMUST00000171404 Ly6gP35461 111 aa11.72□□□□□ -0.53
Gtf3c4-204ENSMUST00000171404 Ighv3-3A0A0A6YWL2 116 aa11.72□□□□□ -0.53
Gtf3c4-204ENSMUST00000171404 Pde6gP09174 87 aa11.72□□□□□ -0.53
Gtf3c4-204ENSMUST00000171404 Gm10267M0QWD8 85 aa11.72□□□□□ -0.53
Gtf3c4-204ENSMUST00000171404 Ndufb1P0DN34 57 aa11.72□□□□□ -0.53
Gtf3c4-204ENSMUST00000171404 Wdr38Q9D994 303 aa11.72□□□□□ -0.53
Gtf3c4-204ENSMUST00000171404 Odf3Q920N1 254 aa11.71□□□□□ -0.53
Gtf3c4-204ENSMUST00000171404 Ovol3D3YYM0 189 aa11.71□□□□□ -0.54
Gtf3c4-204ENSMUST00000171404 Psmb11Q8BG41 302 aa11.71□□□□□ -0.54
Gtf3c4-204ENSMUST00000171404 Pla2g2dQ9WVF6 144 aa11.71□□□□□ -0.54
Gtf3c4-204ENSMUST00000171404 Col4a4Q9QZR9 1682 aa11.7□□□□□ -0.54
Gtf3c4-204ENSMUST00000171404 Arhgap32Q811P8 2089 aa11.7□□□□□ -0.54
Gtf3c4-204ENSMUST00000171404 Cfap46E9Q2C0 2641 aa11.7□□□□□ -0.54
Gtf3c4-204ENSMUST00000171404 Ighv1-59A0A0A6YXE0 117 aa11.7□□□□□ -0.54
Gtf3c4-204ENSMUST00000171404 Psmb8P28063 276 aa11.69□□□□□ -0.54
Gtf3c4-204ENSMUST00000171404 PpdpfQ9CR37 115 aa11.69□□□□□ -0.54
Gtf3c4-204ENSMUST00000171404 BaalcQ8VHV1 145 aa11.68□□□□□ -0.54
Gtf3c4-204ENSMUST00000171404 Gm10226O88253 85 aa11.68□□□□□ -0.54
Gtf3c4-204ENSMUST00000171404 Defb10Q8R2I8 73 aa11.68□□□□□ -0.54
Gtf3c4-204ENSMUST00000171404 Crip2Q9DCT8 208 aaKnown RBP11.68□□□□□ -0.54
Gtf3c4-204ENSMUST00000171404 Med13lQ6JPI3 2207 aa11.68□□□□□ -0.54
Gtf3c4-204ENSMUST00000171404 P06329 120 aa11.68□□□□□ -0.54
Gtf3c4-204ENSMUST00000171404 Defb2P82020 71 aa11.68□□□□□ -0.54
Gtf3c4-204ENSMUST00000171404 CenpeQ6RT24 2474 aaKnown RBP11.68□□□□□ -0.54
Gtf3c4-204ENSMUST00000171404 Igkv8-28A0A0G2JE47 121 aa11.67□□□□□ -0.54
Gtf3c4-204ENSMUST00000171404 Gm11011D3Z3L9 86 aa11.67□□□□□ -0.54
Gtf3c4-204ENSMUST00000171404 Adm2Q7TNK8 150 aa11.67□□□□□ -0.54
Gtf3c4-204ENSMUST00000171404 P01823 113 aa11.67□□□□□ -0.54
Gtf3c4-204ENSMUST00000171404 Ube2d2P62838 147 aa11.66□□□□□ -0.54
Gtf3c4-204ENSMUST00000171404 Fhl2O70433 279 aa11.66□□□□□ -0.54
Gtf3c4-204ENSMUST00000171404 4930564D02RikQ9D4S4 103 aa11.66□□□□□ -0.54
Gtf3c4-204ENSMUST00000171404 Ly6g6cQ9Z1Q4 126 aa11.66□□□□□ -0.54
Gtf3c4-204ENSMUST00000171404 Gm10490F6VBM2 120 aa11.66□□□□□ -0.54
Gtf3c4-204ENSMUST00000171404 Gm5468Q8C3D3 155 aa11.66□□□□□ -0.54
Gtf3c4-204ENSMUST00000171404 Atox1O08997 68 aaKnown RBP11.65□□□□□ -0.54
Gtf3c4-204ENSMUST00000171404 Rbx1P62878 108 aa11.65□□□□□ -0.54
Gtf3c4-204ENSMUST00000171404 Gm21748Q3UE70 102 aa11.65□□□□□ -0.54
Gtf3c4-204ENSMUST00000171404 Ndufc1Q9CQY9 76 aa11.65□□□□□ -0.54
Gtf3c4-204ENSMUST00000171404 Trav14-1A0A0G2JF94 121 aa11.64□□□□□ -0.55
Gtf3c4-204ENSMUST00000171404 Ighv2-6A0A075B6A7 116 aa11.64□□□□□ -0.55
Gtf3c4-204ENSMUST00000171404 Gm9887F6RFI0 207 aa11.64□□□□□ -0.55
Gtf3c4-204ENSMUST00000171404 TectaO08523 2155 aa11.63□□□□□ -0.55
Gtf3c4-204ENSMUST00000171404 Znf239P24399 201 aa11.63□□□□□ -0.55
Gtf3c4-204ENSMUST00000171404 BtcQ05928 177 aa11.63□□□□□ -0.55
Gtf3c4-204ENSMUST00000171404 PtprbB2RU80 1998 aa11.63□□□□□ -0.55
Gtf3c4-204ENSMUST00000171404 Sptan1P16546 2472 aaKnown RBP11.63□□□□□ -0.55
Gtf3c4-204ENSMUST00000171404 Cox8cA6H666 72 aa11.62□□□□□ -0.55
Gtf3c4-204ENSMUST00000171404 Vpreb1P13372 142 aa11.62□□□□□ -0.55
Gtf3c4-204ENSMUST00000171404 Lrp4Q8VI56 1905 aa11.62□□□□□ -0.55
Gtf3c4-204ENSMUST00000171404 CdsnQ7TPC1 561 aa11.62□□□□□ -0.55
Gtf3c4-204ENSMUST00000171404 Ighv1-61P01749 117 aa11.62□□□□□ -0.55
Gtf3c4-204ENSMUST00000171404 TeppQ6IMH0 216 aa11.62□□□□□ -0.55
Gtf3c4-204ENSMUST00000171404 Bri3P28662 125 aa11.61□□□□□ -0.55
Gtf3c4-204ENSMUST00000171404 CrygfQ9CXV3 174 aa11.61□□□□□ -0.55
Gtf3c4-204ENSMUST00000171404 Apoc4Q61268 124 aa11.61□□□□□ -0.55
Gtf3c4-204ENSMUST00000171404 Serp1Q9Z1W5 66 aa11.6□□□□□ -0.55
Gtf3c4-204ENSMUST00000171404 Defb42Q8BVB5 75 aa11.59□□□□□ -0.55
Gtf3c4-204ENSMUST00000171404 A0A286YE49 62 aa11.59□□□□□ -0.55
Gtf3c4-204ENSMUST00000171404 Ighv1-66A0A075B5X5 117 aa11.59□□□□□ -0.55
Gtf3c4-204ENSMUST00000171404 AcanQ61282 2132 aaKnown RBP11.59□□□□□ -0.55
Gtf3c4-204ENSMUST00000171404 Znf706Q9D115 76 aaKnown RBP11.59□□□□□ -0.55
Gtf3c4-204ENSMUST00000171404 Ighv2-6-8A0A0A6YWY9 116 aa11.58□□□□□ -0.56
Gtf3c4-204ENSMUST00000171404 Gm9767G3X930 207 aa11.58□□□□□ -0.56
Gtf3c4-204ENSMUST00000171404 P01659 112 aa11.58□□□□□ -0.56
Gtf3c4-204ENSMUST00000171404 Wfdc17Q5SSJ1 76 aa11.58□□□□□ -0.56
Gtf3c4-204ENSMUST00000171404 Gm28539A0A087WSL9 92 aa11.58□□□□□ -0.56
Gtf3c4-204ENSMUST00000171404 Pla2g1bQ9Z0Y2 146 aa11.57□□□□□ -0.56
Gtf3c4-204ENSMUST00000171404 1700011M02RikB1AX35 88 aa11.57□□□□□ -0.56
Gtf3c4-204ENSMUST00000171404 D730001G18RikA0A087WQU7 115 aa11.57□□□□□ -0.56
Gtf3c4-204ENSMUST00000171404 Pla2g2cP48076 150 aa11.57□□□□□ -0.56
Gtf3c4-204ENSMUST00000171404 CenpwQ3URR0 86 aa11.57□□□□□ -0.56
Gtf3c4-204ENSMUST00000171404 Shisa2Q8QZV2 295 aa11.57□□□□□ -0.56
Gtf3c4-204ENSMUST00000171404 Trbv13-2A0A140T8N6 113 aa11.57□□□□□ -0.56
Gtf3c4-204ENSMUST00000171404 Rpl28P41105 137 aaKnown RBP11.56□□□□□ -0.56
Gtf3c4-204ENSMUST00000171404 Gm8439G3UWA7 96 aa11.55□□□□□ -0.56
Gtf3c4-204ENSMUST00000171404 H2al1kJ3QP08 105 aa11.55□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 253.3 ms