RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Rnf144bQ8BKD6 301 aa14,06□□□□□ -0,16
Trim71-201ENSMUST00000111816 B230359F08RikA0A0B4J1K3 109 aa14,06□□□□□ -0,16
Trim71-201ENSMUST00000111816 Q08AU9 97 aa14,06□□□□□ -0,16
Trim71-201ENSMUST00000111816 Gm12057A0A087WR21 115 aa14,05□□□□□ -0,16
Trim71-201ENSMUST00000111816 Fgf23Q9EPC2 251 aa14,05□□□□□ -0,16
Trim71-201ENSMUST00000111816 4930564D02RikQ9D4S4 103 aa14,04□□□□□ -0,16
Trim71-201ENSMUST00000111816 Rnf185Q91YT2 192 aa14,04□□□□□ -0,16
Trim71-201ENSMUST00000111816 Higd2aQ9CQJ1 106 aa14,04□□□□□ -0,16
Trim71-201ENSMUST00000111816 Gm5468Q8C3D3 155 aa14,03□□□□□ -0,16
Trim71-201ENSMUST00000111816 Igkv8-28A0A0G2JE47 121 aa14,03□□□□□ -0,16
Trim71-201ENSMUST00000111816 Ighv2-6-8A0A0A6YWY9 116 aa14,02□□□□□ -0,17
Trim71-201ENSMUST00000111816 Ighv1-85A0A075B5Y6 117 aa14,02□□□□□ -0,17
Trim71-201ENSMUST00000111816 PlaurP35456 327 aa14,01□□□□□ -0,17
Trim71-201ENSMUST00000111816 Zfp36P22893 319 aaKnown RBP14,01□□□□□ -0,17
Trim71-201ENSMUST00000111816 U90926O08546 118 aa14,01□□□□□ -0,17
Trim71-201ENSMUST00000111816 Ighv1-5A0A0A6YWG2 117 aa14,01□□□□□ -0,17
Trim71-201ENSMUST00000111816 Esm1Q9QYY7 184 aa14,01□□□□□ -0,17
Trim71-201ENSMUST00000111816 P01630 113 aa14□□□□□ -0,17
Trim71-201ENSMUST00000111816 TeppQ6IMH0 216 aa14□□□□□ -0,17
Trim71-201ENSMUST00000111816 Gm15557A6PWY0 234 aa13,99□□□□□ -0,17
Trim71-201ENSMUST00000111816 Gm6899Q3USS0 134 aa13,99□□□□□ -0,17
Trim71-201ENSMUST00000111816 Wisp3D3Z5L9 354 aa13,99□□□□□ -0,17
Trim71-201ENSMUST00000111816 AW146154Q3TPQ7 468 aa13,98□□□□□ -0,17
Trim71-201ENSMUST00000111816 Spint4Q9D263 159 aa13,98□□□□□ -0,17
Trim71-201ENSMUST00000111816 Ube2d3P61079 147 aa13,98□□□□□ -0,17
Trim71-201ENSMUST00000111816 P04942 107 aa13,98□□□□□ -0,17
Trim71-201ENSMUST00000111816 Nbeal1E9PYP2 2688 aa13,98□□□□□ -0,17
Trim71-201ENSMUST00000111816 Ly6hQ9WUC3 139 aa13,98□□□□□ -0,17
Trim71-201ENSMUST00000111816 1520401A03RikA0A0J9YVH6 598 aa13,97□□□□□ -0,17
Trim71-201ENSMUST00000111816 Obox2E9PXV9 151 aa13,97□□□□□ -0,17
Trim71-201ENSMUST00000111816 Wfdc6bF6ULY1 148 aa13,97□□□□□ -0,17
Trim71-201ENSMUST00000111816 Ube2d1P61080 147 aaKnown RBP13,97□□□□□ -0,17
Trim71-201ENSMUST00000111816 4930535I16RikQ9CUI2 172 aa13,97□□□□□ -0,17
Trim71-201ENSMUST00000111816 Gm10553J3QPF1 123 aa13,97□□□□□ -0,17
Trim71-201ENSMUST00000111816 Gm10577Q3UDV9 132 aa13,97□□□□□ -0,17
Trim71-201ENSMUST00000111816 Rps28P62858 69 aaKnown RBP13,96□□□□□ -0,17
Trim71-201ENSMUST00000111816 Wfdc15aQ8BH89 80 aa13,96□□□□□ -0,17
Trim71-201ENSMUST00000111816 Gm10762Q9CZN6 115 aa13,96□□□□□ -0,17
Trim71-201ENSMUST00000111816 P01674 108 aa13,96□□□□□ -0,17
Trim71-201ENSMUST00000111816 Gm21994F6T2D2 329 aa13,96□□□□□ -0,17
Trim71-201ENSMUST00000111816 Usp24B1AY13 2617 aaKnown RBP13,96□□□□□ -0,18
Trim71-201ENSMUST00000111816 Dmbt1Q60997 2085 aa13,95□□□□□ -0,18
Trim71-201ENSMUST00000111816 Ndufa4l2Q4FZG9 87 aa13,95□□□□□ -0,18
Trim71-201ENSMUST00000111816 Gm8439G3UWA7 96 aa13,95□□□□□ -0,18
Trim71-201ENSMUST00000111816 Ighv12-3A0A075B5T1 117 aa13,95□□□□□ -0,18
Trim71-201ENSMUST00000111816 Gm12216A0A1W2P827 62 aa13,94□□□□□ -0,18
Trim71-201ENSMUST00000111816 CrygeQ03740 174 aa13,93□□□□□ -0,18
Trim71-201ENSMUST00000111816 CrygfQ9CXV3 174 aa13,93□□□□□ -0,18
Trim71-201ENSMUST00000111816 1810032O08RikE9PZV8 113 aa13,92□□□□□ -0,18
Trim71-201ENSMUST00000111816 Tcte2E9PY37 120 aa13,92□□□□□ -0,18
Trim71-201ENSMUST00000111816 Smim1P0C8K7 78 aa13,91□□□□□ -0,18
Trim71-201ENSMUST00000111816 PscaP57096 123 aa13,91□□□□□ -0,18
Trim71-201ENSMUST00000111816 LitafQ9JLJ0 161 aa13,91□□□□□ -0,18
Trim71-201ENSMUST00000111816 Chd8Q09XV5 2582 aaKnown RBP13,91□□□□□ -0,18
Trim71-201ENSMUST00000111816 Gm10647E9Q8X0 124 aa13,9□□□□□ -0,18
Trim71-201ENSMUST00000111816 Gm5629P06327 117 aa13,9□□□□□ -0,18
Trim71-201ENSMUST00000111816 Spry2Q9QXV8 315 aa13,9□□□□□ -0,18
Trim71-201ENSMUST00000111816 Q9D131 166 aa13,9□□□□□ -0,18
Trim71-201ENSMUST00000111816 Dazap2Q9DCP9 168 aa13,9□□□□□ -0,18
Trim71-201ENSMUST00000111816 Ighv2-7A0A075B5Q8 116 aa13,89□□□□□ -0,19
Trim71-201ENSMUST00000111816 P06328 117 aa13,89□□□□□ -0,19
Trim71-201ENSMUST00000111816 Fhl3Q9R059 289 aa13,89□□□□□ -0,19
Trim71-201ENSMUST00000111816 Wfdc15bQ9JHY4 80 aa13,88□□□□□ -0,19
Trim71-201ENSMUST00000111816 Klk5Q9D140 293 aa13,88□□□□□ -0,19
Trim71-201ENSMUST00000111816 Col4a3Q9QZS0 1669 aa13,87□□□□□ -0,19
Trim71-201ENSMUST00000111816 Gm5153P01627 120 aa13,87□□□□□ -0,19
Trim71-201ENSMUST00000111816 Ighv8-11A0A075B5X4 119 aa13,86□□□□□ -0,19
Trim71-201ENSMUST00000111816 Mp68P56379 58 aa13,86□□□□□ -0,19
Trim71-201ENSMUST00000111816 Gm11011D3Z3L9 86 aa13,85□□□□□ -0,19
Trim71-201ENSMUST00000111816 P84751 237 aa13,85□□□□□ -0,19
Trim71-201ENSMUST00000111816 Gm17606F6ZL36 78 aa13,85□□□□□ -0,19
Trim71-201ENSMUST00000111816 Sprr2jO70561 109 aa13,85□□□□□ -0,19
Trim71-201ENSMUST00000111816 Piezo2Q8CD54 2822 aa13,85□□□□□ -0,19
Trim71-201ENSMUST00000111816 Ighv1-75A0A075B5Y2 117 aa13,85□□□□□ -0,19
Trim71-201ENSMUST00000111816 TrrapQ80YV3 2565 aaKnown RBP13,85□□□□□ -0,19
Trim71-201ENSMUST00000111816 Rnase1P00683 149 aa13,85□□□□□ -0,19
Trim71-201ENSMUST00000111816 Pip4p1Q3TWL2 284 aa13,85□□□□□ -0,19
Trim71-201ENSMUST00000111816 Gm20538F6Z9R1 75 aa13,84□□□□□ -0,19
Trim71-201ENSMUST00000111816 Gm10570F6VB42 170 aa13,84□□□□□ -0,19
Trim71-201ENSMUST00000111816 Gm17324Q8C6J8 137 aa13,84□□□□□ -0,19
Trim71-201ENSMUST00000111816 Defb40Q70KL2 73 aa13,83□□□□□ -0,2
Trim71-201ENSMUST00000111816 Rspo1Q9Z132 265 aa13,83□□□□□ -0,2
Trim71-201ENSMUST00000111816 LhbO09108 141 aa13,83□□□□□ -0,2
Trim71-201ENSMUST00000111816 P18527 97 aa13,83□□□□□ -0,2
Trim71-201ENSMUST00000111816 Ly6g6dQ9Z1Q3 135 aa13,83□□□□□ -0,2
Trim71-201ENSMUST00000111816 Igkv8-19A0A0G2JFN8 121 aa13,83□□□□□ -0,2
Trim71-201ENSMUST00000111816 4930518I15RikQ3V2W7 57 aa13,82□□□□□ -0,2
Trim71-201ENSMUST00000111816 C130032M10RikQ8C888 123 aa13,82□□□□□ -0,2
Trim71-201ENSMUST00000111816 RetnlbQ99P86 105 aa13,82□□□□□ -0,2
Trim71-201ENSMUST00000111816 Defb18Q30KP5 85 aa13,81□□□□□ -0,2
Trim71-201ENSMUST00000111816 Col8a2P25318 699 aa13,8□□□□□ -0,2
Trim71-201ENSMUST00000111816 Ighv1-63A0A075B5X2 117 aa13,8□□□□□ -0,2
Trim71-201ENSMUST00000111816 IgipA0A1B0GR74 53 aa13,8□□□□□ -0,2
Trim71-201ENSMUST00000111816 SnurfQ9WU12 71 aa13,8□□□□□ -0,2
Trim71-201ENSMUST00000111816 P01823 113 aa13,79□□□□□ -0,2
Trim71-201ENSMUST00000111816 Rpl28P41105 137 aaKnown RBP13,79□□□□□ -0,2
Trim71-201ENSMUST00000111816 Gm5878E9PUB3 99 aa13,79□□□□□ -0,2
Trim71-201ENSMUST00000111816 Col5a1O88207 1838 aa13,79□□□□□ -0,2
Trim71-201ENSMUST00000111816 Gm10267M0QWD8 85 aa13,79□□□□□ -0,2
Trim71-201ENSMUST00000111816 P01728 117 aa13,79□□□□□ -0,2
Retrieved 100 of 22,080 RNA–protein pairs in 39 ms