RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Gm10322F7D7I4 111 aa11.66□□□□□ -0.54
Clcn3-203ENSMUST00000093490 9430015G10RikA2ASP7 199 aa11.65□□□□□ -0.54
Clcn3-203ENSMUST00000093490 Defb10Q8R2I8 73 aa11.65□□□□□ -0.54
Clcn3-203ENSMUST00000093490 Ufsp1Q9CZP0 217 aa11.64□□□□□ -0.55
Clcn3-203ENSMUST00000093490 CrygfQ9CXV3 174 aa11.64□□□□□ -0.55
Clcn3-203ENSMUST00000093490 Vpreb1P13372 142 aa11.64□□□□□ -0.55
Clcn3-203ENSMUST00000093490 EnhoQ8K1D8 76 aa11.64□□□□□ -0.55
Clcn3-203ENSMUST00000093490 Rnf152Q8BG47 203 aa11.64□□□□□ -0.55
Clcn3-203ENSMUST00000093490 Defb12Q8K4N3 78 aa11.64□□□□□ -0.55
Clcn3-203ENSMUST00000093490 Gm9573F7C950 1606 aa11.63□□□□□ -0.55
Clcn3-203ENSMUST00000093490 Plac8l1Q08EJ0 177 aa11.63□□□□□ -0.55
Clcn3-203ENSMUST00000093490 Gm17521F6QAC8 156 aa11.63□□□□□ -0.55
Clcn3-203ENSMUST00000093490 C1qcQ02105 246 aa11.63□□□□□ -0.55
Clcn3-203ENSMUST00000093490 Lrp4Q8VI56 1905 aa11.63□□□□□ -0.55
Clcn3-203ENSMUST00000093490 SptssbQ925E8 76 aa11.62□□□□□ -0.55
Clcn3-203ENSMUST00000093490 Gm10577Q3UDV9 132 aa11.62□□□□□ -0.55
Clcn3-203ENSMUST00000093490 Polr2kQ63871 58 aa11.62□□□□□ -0.55
Clcn3-203ENSMUST00000093490 Serp2Q6TAW2 65 aa11.62□□□□□ -0.55
Clcn3-203ENSMUST00000093490 Pla2g1bQ9Z0Y2 146 aa11.62□□□□□ -0.55
Clcn3-203ENSMUST00000093490 CenpwQ3URR0 86 aa11.61□□□□□ -0.55
Clcn3-203ENSMUST00000093490 Q8K1L6 76 aa11.61□□□□□ -0.55
Clcn3-203ENSMUST00000093490 Igkv3-10A0A0G2JGN0 119 aa11.61□□□□□ -0.55
Clcn3-203ENSMUST00000093490 NbasE9Q411 2356 aa11.6□□□□□ -0.55
Clcn3-203ENSMUST00000093490 Ncoa6Q9JL19 2067 aa11.6□□□□□ -0.55
Clcn3-203ENSMUST00000093490 Gm9805F6YK59 57 aa11.6□□□□□ -0.55
Clcn3-203ENSMUST00000093490 Prr15lQ8JZM2 100 aa11.6□□□□□ -0.55
Clcn3-203ENSMUST00000093490 1520401A03RikA0A0J9YVH6 598 aa11.59□□□□□ -0.55
Clcn3-203ENSMUST00000093490 Col4a2P08122 1707 aa11.59□□□□□ -0.55
Clcn3-203ENSMUST00000093490 Fam19a1Q7TPG8 133 aa11.59□□□□□ -0.55
Clcn3-203ENSMUST00000093490 Fgf23Q9EPC2 251 aa11.58□□□□□ -0.55
Clcn3-203ENSMUST00000093490 Gm20604F8WIA3 75 aa11.58□□□□□ -0.56
Clcn3-203ENSMUST00000093490 Pcnx3Q8VI59 2028 aa11.58□□□□□ -0.56
Clcn3-203ENSMUST00000093490 A830005F24RikQ8BRT5 167 aa11.58□□□□□ -0.56
Clcn3-203ENSMUST00000093490 Ube2d1P61080 147 aaKnown RBP11.58□□□□□ -0.56
Clcn3-203ENSMUST00000093490 Gm9922Q8C3P1 144 aa11.58□□□□□ -0.56
Clcn3-203ENSMUST00000093490 Ighv1-62-1A0A075B5U3 116 aa11.57□□□□□ -0.56
Clcn3-203ENSMUST00000093490 P01823 113 aa11.57□□□□□ -0.56
Clcn3-203ENSMUST00000093490 Col5a1O88207 1838 aa11.57□□□□□ -0.56
Clcn3-203ENSMUST00000093490 Gm16223Q8CBM3 117 aa11.57□□□□□ -0.56
Clcn3-203ENSMUST00000093490 Wfdc15aQ8BH89 80 aa11.55□□□□□ -0.56
Clcn3-203ENSMUST00000093490 PrlhG3UWC3 86 aa11.55□□□□□ -0.56
Clcn3-203ENSMUST00000093490 Atox1O08997 68 aaKnown RBP11.55□□□□□ -0.56
Clcn3-203ENSMUST00000093490 SvipQ3UZP4 77 aa11.55□□□□□ -0.56
Clcn3-203ENSMUST00000093490 4930564D02RikQ9D4S4 103 aa11.55□□□□□ -0.56
Clcn3-203ENSMUST00000093490 Col27a1Q5QNQ9 1845 aa11.54□□□□□ -0.56
Clcn3-203ENSMUST00000093490 9530003J23RikQ8BM26 151 aa11.54□□□□□ -0.56
Clcn3-203ENSMUST00000093490 Adamts20P59511 1906 aa11.54□□□□□ -0.56
Clcn3-203ENSMUST00000093490 Igkv3-4A0A140T8Q4 119 aa11.54□□□□□ -0.56
Clcn3-203ENSMUST00000093490 Gm21748Q3UE70 102 aa11.54□□□□□ -0.56
Clcn3-203ENSMUST00000093490 Defb42Q8BVB5 75 aa11.54□□□□□ -0.56
Clcn3-203ENSMUST00000093490 Cox7bP56393 80 aa11.54□□□□□ -0.56
Clcn3-203ENSMUST00000093490 Tcl1b5P56845 121 aa11.53□□□□□ -0.56
Clcn3-203ENSMUST00000093490 Sec61gP60060 68 aa11.52□□□□□ -0.56
Clcn3-203ENSMUST00000093490 PscaP57096 123 aa11.52□□□□□ -0.56
Clcn3-203ENSMUST00000093490 2010109I03RikQ9CQ11 111 aa11.52□□□□□ -0.56
Clcn3-203ENSMUST00000093490 Med13lQ6JPI3 2207 aa11.52□□□□□ -0.57
Clcn3-203ENSMUST00000093490 Gm10509O88255 85 aa11.51□□□□□ -0.57
Clcn3-203ENSMUST00000093490 CrygeQ03740 174 aa11.51□□□□□ -0.57
Clcn3-203ENSMUST00000093490 Gm5464Q3UY29 175 aa11.51□□□□□ -0.57
Clcn3-203ENSMUST00000093490 Pla2g2eQ9QUL3 142 aa11.51□□□□□ -0.57
Clcn3-203ENSMUST00000093490 Dido1Q8C9B9 2256 aaKnown RBP11.51□□□□□ -0.57
Clcn3-203ENSMUST00000093490 LhbO09108 141 aa11.5□□□□□ -0.57
Clcn3-203ENSMUST00000093490 Gm10490F6VBM2 120 aa11.5□□□□□ -0.57
Clcn3-203ENSMUST00000093490 P06320 134 aa11.5□□□□□ -0.57
Clcn3-203ENSMUST00000093490 Nupr2Q497P3 102 aa11.5□□□□□ -0.57
Clcn3-203ENSMUST00000093490 A830031A19RikQ8BNT5 113 aa11.5□□□□□ -0.57
Clcn3-203ENSMUST00000093490 Igkv4-92A0A0B4J1I2 117 aa11.49□□□□□ -0.57
Clcn3-203ENSMUST00000093490 Ndufb1P0DN34 57 aa11.49□□□□□ -0.57
Clcn3-203ENSMUST00000093490 Gm3285A0A1W2P7U0 201 aa11.49□□□□□ -0.57
Clcn3-203ENSMUST00000093490 P01755 137 aa11.49□□□□□ -0.57
Clcn3-203ENSMUST00000093490 Ighv1-72P01751 139 aa11.48□□□□□ -0.57
Clcn3-203ENSMUST00000093490 Gm19935A0A1B0GSF9 52 aa11.48□□□□□ -0.57
Clcn3-203ENSMUST00000093490 1700011M02RikB1AX35 88 aa11.48□□□□□ -0.57
Clcn3-203ENSMUST00000093490 5730596B20RikQ8BQ08 205 aa11.48□□□□□ -0.57
Clcn3-203ENSMUST00000093490 Smr3aQ61900 147 aa11.47□□□□□ -0.57
Clcn3-203ENSMUST00000093490 Wfdc10Q3V2J9 124 aa11.47□□□□□ -0.57
Clcn3-203ENSMUST00000093490 Krtap27-1E9PX37 202 aa11.46□□□□□ -0.57
Clcn3-203ENSMUST00000093490 Ube2d3P61079 147 aa11.46□□□□□ -0.57
Clcn3-203ENSMUST00000093490 Ube2d2P62838 147 aa11.46□□□□□ -0.57
Clcn3-203ENSMUST00000093490 H2al1bA0A087WP11 105 aa11.46□□□□□ -0.57
Clcn3-203ENSMUST00000093490 A930009A15RikG3UYI6 118 aa11.46□□□□□ -0.57
Clcn3-203ENSMUST00000093490 SrarpQ3ULG3 163 aa11.46□□□□□ -0.58
Clcn3-203ENSMUST00000093490 Cdc42se2Q8BGH7 84 aa11.46□□□□□ -0.58
Clcn3-203ENSMUST00000093490 BaalcQ8VHV1 145 aa11.45□□□□□ -0.58
Clcn3-203ENSMUST00000093490 Gm12057A0A087WR21 115 aa11.45□□□□□ -0.58
Clcn3-203ENSMUST00000093490 Gm10337F7DEP7 55 aa11.44□□□□□ -0.58
Clcn3-203ENSMUST00000093490 P06329 120 aa11.44□□□□□ -0.58
Clcn3-203ENSMUST00000093490 Ighv8-11A0A075B5X4 119 aa11.44□□□□□ -0.58
Clcn3-203ENSMUST00000093490 Znf706Q9D115 76 aaKnown RBP11.44□□□□□ -0.58
Clcn3-203ENSMUST00000093490 Igkv8-21A0A140T8P7 120 aa11.43□□□□□ -0.58
Clcn3-203ENSMUST00000093490 Obox2E9PXV9 151 aa11.43□□□□□ -0.58
Clcn3-203ENSMUST00000093490 Ighv2-9-1A0A075B697 116 aa11.43□□□□□ -0.58
Clcn3-203ENSMUST00000093490 Gm3443F7CCV5 94 aa11.43□□□□□ -0.58
Clcn3-203ENSMUST00000093490 4930535I16RikQ9CUI2 172 aa11.43□□□□□ -0.58
Clcn3-203ENSMUST00000093490 Igkv1-117A0A140T8M0 119 aa11.43□□□□□ -0.58
Clcn3-203ENSMUST00000093490 Igkv3-3A0A140T8Q0 119 aa11.43□□□□□ -0.58
Clcn3-203ENSMUST00000093490 Prr9Q8BV84 116 aa11.43□□□□□ -0.58
Clcn3-203ENSMUST00000093490 H2al1aQ5M8Q2 105 aa11.42□□□□□ -0.58
Clcn3-203ENSMUST00000093490 H2al1eQ810S6 105 aa11.42□□□□□ -0.58
Clcn3-203ENSMUST00000093490 Defb13Q8R2I4 64 aa11.42□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 50.7 ms