RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Klk1b4P00757 256 aa8.38□□□□□ -1.07
Col9a1-202ENSMUST00000088349 CenpwQ3URR0 86 aa8.38□□□□□ -1.07
Col9a1-202ENSMUST00000088349 March3Q8BRX9 218 aa8.38□□□□□ -1.07
Col9a1-202ENSMUST00000088349 P01738 130 aa8.38□□□□□ -1.07
Col9a1-202ENSMUST00000088349 H1fxQ80ZM5 188 aa8.38□□□□□ -1.07
Col9a1-202ENSMUST00000088349 Gm7257D3YX25 99 aa8.37□□□□□ -1.07
Col9a1-202ENSMUST00000088349 Cox6cQ9CPQ1 76 aa8.37□□□□□ -1.07
Col9a1-202ENSMUST00000088349 Ighv1-11A0A0A6YWI9 117 aa8.37□□□□□ -1.07
Col9a1-202ENSMUST00000088349 P01786 117 aa8.37□□□□□ -1.07
Col9a1-202ENSMUST00000088349 Tmem101Q91VP7 257 aa8.37□□□□□ -1.07
Col9a1-202ENSMUST00000088349 Spry2Q9QXV8 315 aa8.37□□□□□ -1.07
Col9a1-202ENSMUST00000088349 Phpt1Q9DAK9 124 aa8.36□□□□□ -1.07
Col9a1-202ENSMUST00000088349 Xlr5cQ9JJR2 179 aa8.36□□□□□ -1.07
Col9a1-202ENSMUST00000088349 Ndufa3Q9CQ91 84 aa8.36□□□□□ -1.07
Col9a1-202ENSMUST00000088349 Atp5g1Q9CR84 136 aa8.36□□□□□ -1.07
Col9a1-202ENSMUST00000088349 Tex15F8VPN2 2785 aa8.36□□□□□ -1.07
Col9a1-202ENSMUST00000088349 Igkv4-68A0A0B4J1I7 117 aa8.35□□□□□ -1.07
Col9a1-202ENSMUST00000088349 P01823 113 aa8.35□□□□□ -1.07
Col9a1-202ENSMUST00000088349 Defa1P11477 93 aa8.35□□□□□ -1.07
Col9a1-202ENSMUST00000088349 Defb2P82020 71 aa8.35□□□□□ -1.07
Col9a1-202ENSMUST00000088349 4930544G11RikQ9CR99 193 aa8.35□□□□□ -1.07
Col9a1-202ENSMUST00000088349 Ly6hQ9WUC3 139 aa8.35□□□□□ -1.07
Col9a1-202ENSMUST00000088349 Trbv30A0A0B4J1P1 111 aa8.35□□□□□ -1.07
Col9a1-202ENSMUST00000088349 Smim20D3Z7Q2 69 aa8.35□□□□□ -1.07
Col9a1-202ENSMUST00000088349 CirbpP60824 172 aaKnown RBP8.35□□□□□ -1.07
Col9a1-202ENSMUST00000088349 4930432M17RikQ3V0W9 174 aa8.34□□□□□ -1.07
Col9a1-202ENSMUST00000088349 Smim10l1A0A087WNQ7 89 aa8.34□□□□□ -1.07
Col9a1-202ENSMUST00000088349 CdsnQ7TPC1 561 aa8.33□□□□□ -1.08
Col9a1-202ENSMUST00000088349 Trav3-4A0A075B654 114 aa8.33□□□□□ -1.08
Col9a1-202ENSMUST00000088349 P01729 129 aa8.33□□□□□ -1.08
Col9a1-202ENSMUST00000088349 Foxc1Q61572 553 aa8.33□□□□□ -1.08
Col9a1-202ENSMUST00000088349 Gm10300Q8C8P7 189 aa8.33□□□□□ -1.08
Col9a1-202ENSMUST00000088349 Fam110dQ80X91 271 aa8.33□□□□□ -1.08
Col9a1-202ENSMUST00000088349 Shisa2Q8QZV2 295 aa8.33□□□□□ -1.08
Col9a1-202ENSMUST00000088349 Ucn2Q99ML8 113 aa8.33□□□□□ -1.08
Col9a1-202ENSMUST00000088349 Igkv4-79A0A075B5L8 119 aa8.32□□□□□ -1.08
Col9a1-202ENSMUST00000088349 Cox17P56394 63 aa8.32□□□□□ -1.08
Col9a1-202ENSMUST00000088349 Gm3233E9Q2H5 230 aa8.32□□□□□ -1.08
Col9a1-202ENSMUST00000088349 Psmb8P28063 276 aa8.32□□□□□ -1.08
Col9a1-202ENSMUST00000088349 Ank2Q8C8R3 3898 aa8.32□□□□□ -1.08
Col9a1-202ENSMUST00000088349 Trav9d-4A0A0G2JG37 103 aa8.31□□□□□ -1.08
Col9a1-202ENSMUST00000088349 Gm867A0A1W2P7T4 151 aa8.31□□□□□ -1.08
Col9a1-202ENSMUST00000088349 PkigO70139 76 aa8.31□□□□□ -1.08
Col9a1-202ENSMUST00000088349 Pglyrp4Q0VB07 374 aa8.31□□□□□ -1.08
Col9a1-202ENSMUST00000088349 Gm10322F7D7I4 111 aa8.31□□□□□ -1.08
Col9a1-202ENSMUST00000088349 Smlr1J3QMJ4 66 aa8.31□□□□□ -1.08
Col9a1-202ENSMUST00000088349 Fgfbp3Q1HCM0 245 aa8.31□□□□□ -1.08
Col9a1-202ENSMUST00000088349 4930442H23RikQ9D5G7 103 aa8.31□□□□□ -1.08
Col9a1-202ENSMUST00000088349 AtrQ9JKK8 2635 aa8.31□□□□□ -1.08
Col9a1-202ENSMUST00000088349 PrlhG3UWC3 86 aa8.31□□□□□ -1.08
Col9a1-202ENSMUST00000088349 Morn3Q8C5T4 241 aa8.3□□□□□ -1.08
Col9a1-202ENSMUST00000088349 Sostdc1Q9CQN4 206 aa8.3□□□□□ -1.08
Col9a1-202ENSMUST00000088349 Eif4ebp1Q60876 117 aa8.3□□□□□ -1.08
Col9a1-202ENSMUST00000088349 Trav4d-3A0A075B625 110 aa8.29□□□□□ -1.08
Col9a1-202ENSMUST00000088349 Trav13-4-dv7A0A075B6C2 110 aa8.29□□□□□ -1.08
Col9a1-202ENSMUST00000088349 SelenowP63300 88 aa8.29□□□□□ -1.08
Col9a1-202ENSMUST00000088349 Pfn2Q9JJV2 140 aa8.29□□□□□ -1.08
Col9a1-202ENSMUST00000088349 Timm17bQ9Z0V7 172 aa8.29□□□□□ -1.08
Col9a1-202ENSMUST00000088349 Trav9d-3A0A075B695 113 aa8.29□□□□□ -1.08
Col9a1-202ENSMUST00000088349 Rpl35aO55142 110 aa8.29□□□□□ -1.08
Col9a1-202ENSMUST00000088349 Defa16P50714 93 aa8.29□□□□□ -1.08
Col9a1-202ENSMUST00000088349 TeppQ6IMH0 216 aa8.29□□□□□ -1.08
Col9a1-202ENSMUST00000088349 Trav4-3A0A0B4J1K1 110 aa8.28□□□□□ -1.08
Col9a1-202ENSMUST00000088349 Gm9922Q8C3P1 144 aa8.28□□□□□ -1.08
Col9a1-202ENSMUST00000088349 Gm3443F7CCV5 94 aa8.28□□□□□ -1.08
Col9a1-202ENSMUST00000088349 Gm26661M0QWV4 156 aa8.28□□□□□ -1.08
Col9a1-202ENSMUST00000088349 Lst1O08843 95 aa8.28□□□□□ -1.08
Col9a1-202ENSMUST00000088349 1700010B08RikQ9DAI7 102 aa8.28□□□□□ -1.08
Col9a1-202ENSMUST00000088349 Ighv1-62-1A0A075B5U3 116 aa8.27□□□□□ -1.09
Col9a1-202ENSMUST00000088349 Gm28539A0A087WSL9 92 aa8.27□□□□□ -1.09
Col9a1-202ENSMUST00000088349 Rpl36aP83882 106 aaKnown RBP8.27□□□□□ -1.09
Col9a1-202ENSMUST00000088349 Tmem213Q08EA8 116 aa8.27□□□□□ -1.09
Col9a1-202ENSMUST00000088349 Gm904Q3V2L5 102 aa8.27□□□□□ -1.09
Col9a1-202ENSMUST00000088349 Nop10Q9CQS2 64 aa8.27□□□□□ -1.09
Col9a1-202ENSMUST00000088349 Sh2d1aO88890 126 aa8.27□□□□□ -1.09
Col9a1-202ENSMUST00000088349 P01745 121 aa8.27□□□□□ -1.09
Col9a1-202ENSMUST00000088349 1700011M02RikB1AX35 88 aa8.26□□□□□ -1.09
Col9a1-202ENSMUST00000088349 Crlf1Q9JM58 425 aa8.26□□□□□ -1.09
Col9a1-202ENSMUST00000088349 Gatd1Q8BFQ8 220 aa8.26□□□□□ -1.09
Col9a1-202ENSMUST00000088349 Defb29Q8BGW9 78 aa8.26□□□□□ -1.09
Col9a1-202ENSMUST00000088349 Bles03Q8VD62 251 aa8.26□□□□□ -1.09
Col9a1-202ENSMUST00000088349 Ss18l2Q9D174 77 aa8.26□□□□□ -1.09
Col9a1-202ENSMUST00000088349 Trav14d-3-dv8A0A075B619 120 aa8.26□□□□□ -1.09
Col9a1-202ENSMUST00000088349 Q99M08 65 aa8.26□□□□□ -1.09
Col9a1-202ENSMUST00000088349 Esm1Q9QYY7 184 aa8.26□□□□□ -1.09
Col9a1-202ENSMUST00000088349 Notch2O35516 2470 aa8.25□□□□□ -1.09
Col9a1-202ENSMUST00000088349 Igkv1-35A0A0G2JDE5 120 aa8.25□□□□□ -1.09
Col9a1-202ENSMUST00000088349 Gm7075D3Z497 112 aa8.25□□□□□ -1.09
Col9a1-202ENSMUST00000088349 Rnase1P00683 149 aa8.25□□□□□ -1.09
Col9a1-202ENSMUST00000088349 BB014433Q8C5R5 389 aa8.25□□□□□ -1.09
Col9a1-202ENSMUST00000088349 Nbeal2Q6ZQA0 2742 aa8.25□□□□□ -1.09
Col9a1-202ENSMUST00000088349 Il19Q8CJ70 176 aa8.25□□□□□ -1.09
Col9a1-202ENSMUST00000088349 Ighv1-49A0A0A6YWX2 117 aa8.24□□□□□ -1.09
Col9a1-202ENSMUST00000088349 Defa2P28309 93 aa8.24□□□□□ -1.09
Col9a1-202ENSMUST00000088349 Gm17472A0A075B683 117 aa8.24□□□□□ -1.09
Col9a1-202ENSMUST00000088349 B230359F08RikA0A0B4J1K3 109 aa8.24□□□□□ -1.09
Col9a1-202ENSMUST00000088349 Atp5eP56382 52 aa8.24□□□□□ -1.09
Col9a1-202ENSMUST00000088349 PemtQ61907 199 aa8.24□□□□□ -1.09
Col9a1-202ENSMUST00000088349 Tenm4Q3UHK6 2771 aa8.24□□□□□ -1.09
Col9a1-202ENSMUST00000088349 Gm10647E9Q8X0 124 aa8.23□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 40.1 ms