RNA–Protein interactions for RNA: ENSMUST00000065304.11

Rtn3-202, Transcript of Reticulon-3, mousemouse

TSL 1 (best) BASIC

Gene Rtn3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3-202ENSMUST00000065304 GrnP28798 589 aaKnown RBP8.39□□□□□ -1.07
Rtn3-202ENSMUST00000065304 Cd164Q9R0L9 197 aa8.39□□□□□ -1.07
Rtn3-202ENSMUST00000065304 Dock1Q8BUR4 1865 aa8.39□□□□□ -1.07
Rtn3-202ENSMUST00000065304 NbasE9Q411 2356 aa8.39□□□□□ -1.07
Rtn3-202ENSMUST00000065304 Trbv13-2A0A140T8N6 113 aa8.39□□□□□ -1.07
Rtn3-202ENSMUST00000065304 Ifitm6A0A1B0GS75 124 aa8.38□□□□□ -1.07
Rtn3-202ENSMUST00000065304 Q9D8Q6 235 aa8.38□□□□□ -1.07
Rtn3-202ENSMUST00000065304 Bean1Q9EQG5 255 aa8.38□□□□□ -1.07
Rtn3-202ENSMUST00000065304 Ank3G5E8K5 1961 aa8.38□□□□□ -1.07
Rtn3-202ENSMUST00000065304 Q9CX25 107 aa8.38□□□□□ -1.07
Rtn3-202ENSMUST00000065304 2310009B15RikA0A0A6YWI4 143 aa8.37□□□□□ -1.07
Rtn3-202ENSMUST00000065304 Defb38Q7TNV7 63 aa8.37□□□□□ -1.07
Rtn3-202ENSMUST00000065304 9130230L23RikQ8CC80 163 aa8.37□□□□□ -1.07
Rtn3-202ENSMUST00000065304 CrygeQ03740 174 aa8.37□□□□□ -1.07
Rtn3-202ENSMUST00000065304 CrygfQ9CXV3 174 aa8.37□□□□□ -1.07
Rtn3-202ENSMUST00000065304 Ighv2-9-1A0A075B697 116 aa8.37□□□□□ -1.07
Rtn3-202ENSMUST00000065304 Sprr3O09116 238 aa8.37□□□□□ -1.07
Rtn3-202ENSMUST00000065304 4930556J24RikQ9D4U7 146 aa8.37□□□□□ -1.07
Rtn3-202ENSMUST00000065304 Ighv2-3A0A075B696 115 aa8.36□□□□□ -1.07
Rtn3-202ENSMUST00000065304 P06329 120 aa8.36□□□□□ -1.07
Rtn3-202ENSMUST00000065304 Spint4Q9D263 159 aa8.36□□□□□ -1.07
Rtn3-202ENSMUST00000065304 Dennd4aE9Q8V6 1869 aa8.36□□□□□ -1.07
Rtn3-202ENSMUST00000065304 Cd27P41272 250 aa8.36□□□□□ -1.07
Rtn3-202ENSMUST00000065304 Limd2Q8BGB5 128 aa8.36□□□□□ -1.07
Rtn3-202ENSMUST00000065304 Sbf2E9PXF8 1872 aa8.35□□□□□ -1.07
Rtn3-202ENSMUST00000065304 Col24a1Q30D77 1733 aa8.35□□□□□ -1.07
Rtn3-202ENSMUST00000065304 Gm9949Q8C9F4 104 aa8.35□□□□□ -1.07
Rtn3-202ENSMUST00000065304 PtprdQ64487 1912 aa8.35□□□□□ -1.07
Rtn3-202ENSMUST00000065304 Smim1P0C8K7 78 aa8.35□□□□□ -1.07
Rtn3-202ENSMUST00000065304 Wfdc13Q5DQQ6 81 aa8.35□□□□□ -1.07
Rtn3-202ENSMUST00000065304 Dock4P59764 1978 aa8.35□□□□□ -1.07
Rtn3-202ENSMUST00000065304 Coa6Q8BGD8 79 aa8.35□□□□□ -1.07
Rtn3-202ENSMUST00000065304 Sbf1Q6ZPE2 1867 aa8.34□□□□□ -1.07
Rtn3-202ENSMUST00000065304 Znf239P24399 201 aa8.34□□□□□ -1.07
Rtn3-202ENSMUST00000065304 MyofQ69ZN7 2048 aaKnown RBP8.33□□□□□ -1.08
Rtn3-202ENSMUST00000065304 Wfdc17Q5SSJ1 76 aa8.33□□□□□ -1.08
Rtn3-202ENSMUST00000065304 Cyyr1Q8VIH7 165 aa8.33□□□□□ -1.08
Rtn3-202ENSMUST00000065304 Ighv1-66A0A075B5X5 117 aa8.33□□□□□ -1.08
Rtn3-202ENSMUST00000065304 Dock3Q8CIQ7 2027 aa8.33□□□□□ -1.08
Rtn3-202ENSMUST00000065304 Col4a3Q9QZS0 1669 aa8.33□□□□□ -1.08
Rtn3-202ENSMUST00000065304 AcanQ61282 2132 aaKnown RBP8.32□□□□□ -1.08
Rtn3-202ENSMUST00000065304 Cspg4Q8VHY0 2327 aa8.32□□□□□ -1.08
Rtn3-202ENSMUST00000065304 Eml6Q5SQM0 1958 aa8.32□□□□□ -1.08
Rtn3-202ENSMUST00000065304 P01820 115 aa8.32□□□□□ -1.08
Rtn3-202ENSMUST00000065304 P01755 137 aa8.32□□□□□ -1.08
Rtn3-202ENSMUST00000065304 Gm9913Q8BQQ2 135 aa8.32□□□□□ -1.08
Rtn3-202ENSMUST00000065304 4930524J08RikQ9CUJ5 163 aa8.32□□□□□ -1.08
Rtn3-202ENSMUST00000065304 1700011M02RikB1AX35 88 aa8.32□□□□□ -1.08
Rtn3-202ENSMUST00000065304 Nsun4C4P6S0 806 aaKnown RBP8.32□□□□□ -1.08
Rtn3-202ENSMUST00000065304 Gm10845Q3UNY9 185 aa8.32□□□□□ -1.08
Rtn3-202ENSMUST00000065304 Pip4p1Q3TWL2 284 aa8.31□□□□□ -1.08
Rtn3-202ENSMUST00000065304 Wdr81Q5ND34 1934 aa8.31□□□□□ -1.08
Rtn3-202ENSMUST00000065304 A0A286YCN5 57 aa8.31□□□□□ -1.08
Rtn3-202ENSMUST00000065304 Gm10570F6VB42 170 aa8.3□□□□□ -1.08
Rtn3-202ENSMUST00000065304 BC025920Q3US60 128 aa8.3□□□□□ -1.08
Rtn3-202ENSMUST00000065304 Polr2kQ63871 58 aa8.3□□□□□ -1.08
Rtn3-202ENSMUST00000065304 Wfdc12Q9JHY3 85 aa8.3□□□□□ -1.08
Rtn3-202ENSMUST00000065304 Greb1Q3UHK3 1954 aa8.3□□□□□ -1.08
Rtn3-202ENSMUST00000065304 SnurfQ9WU12 71 aa8.29□□□□□ -1.08
Rtn3-202ENSMUST00000065304 Hivep2Q3UHF7 2430 aa8.29□□□□□ -1.08
Rtn3-202ENSMUST00000065304 Zswim8Q3UHH1 1832 aaKnown RBP8.29□□□□□ -1.08
Rtn3-202ENSMUST00000065304 Pla2g1bQ9Z0Y2 146 aa8.29□□□□□ -1.08
Rtn3-202ENSMUST00000065304 Plxna4Q80UG2 1893 aa8.29□□□□□ -1.08
Rtn3-202ENSMUST00000065304 Crip2Q9DCT8 208 aaKnown RBP8.29□□□□□ -1.08
Rtn3-202ENSMUST00000065304 MylkQ6PDN3 1941 aaKnown RBP8.29□□□□□ -1.08
Rtn3-202ENSMUST00000065304 Ly6c2P0CW03 131 aa8.28□□□□□ -1.08
Rtn3-202ENSMUST00000065304 SbsponQ3UPR9 264 aa8.28□□□□□ -1.08
Rtn3-202ENSMUST00000065304 Col11a1Q61245 1804 aa8.28□□□□□ -1.08
Rtn3-202ENSMUST00000065304 P01659 112 aa8.27□□□□□ -1.08
Rtn3-202ENSMUST00000065304 Wfdc3Q14AE4 130 aa8.27□□□□□ -1.08
Rtn3-202ENSMUST00000065304 Ntn5Q3UQ22 452 aa8.27□□□□□ -1.09
Rtn3-202ENSMUST00000065304 PolqQ8CGS6 2544 aa8.27□□□□□ -1.09
Rtn3-202ENSMUST00000065304 Gm10197F6QEY5 67 aa8.27□□□□□ -1.09
Rtn3-202ENSMUST00000065304 Ighv1-72P01751 139 aa8.27□□□□□ -1.09
Rtn3-202ENSMUST00000065304 Ighv1-56A0A0A6YXG2 117 aa8.26□□□□□ -1.09
Rtn3-202ENSMUST00000065304 RlfA2A7F4 1918 aa8.26□□□□□ -1.09
Rtn3-202ENSMUST00000065304 Gm5142Q8C5X9 133 aa8.26□□□□□ -1.09
Rtn3-202ENSMUST00000065304 BC067074F6RXI4 2391 aa8.25□□□□□ -1.09
Rtn3-202ENSMUST00000065304 Gm12057A0A087WR21 115 aa8.25□□□□□ -1.09
Rtn3-202ENSMUST00000065304 Gm5153P01627 120 aa8.25□□□□□ -1.09
Rtn3-202ENSMUST00000065304 Spry4Q9WTP2 300 aa8.25□□□□□ -1.09
Rtn3-202ENSMUST00000065304 Gm20708H3BKF4 155 aa8.25□□□□□ -1.09
Rtn3-202ENSMUST00000065304 Cdc42se2Q8BGH7 84 aa8.25□□□□□ -1.09
Rtn3-202ENSMUST00000065304 Gm10160F6Y577 67 aa8.25□□□□□ -1.09
Rtn3-202ENSMUST00000065304 CstadQ9D245 104 aa8.24□□□□□ -1.09
Rtn3-202ENSMUST00000065304 Zfyve26Q5DU37 2529 aa8.24□□□□□ -1.09
Rtn3-202ENSMUST00000065304 Pla2g2dQ9WVF6 144 aa8.24□□□□□ -1.09
Rtn3-202ENSMUST00000065304 Kif26aQ52KG5 1881 aa8.24□□□□□ -1.09
Rtn3-202ENSMUST00000065304 CnfnQ6PCW6 111 aa8.23□□□□□ -1.09
Rtn3-202ENSMUST00000065304 PtprfA2A8L5 1898 aa8.23□□□□□ -1.09
Rtn3-202ENSMUST00000065304 TshbP12656 138 aa8.23□□□□□ -1.09
Rtn3-202ENSMUST00000065304 Rps28P62858 69 aaKnown RBP8.23□□□□□ -1.09
Rtn3-202ENSMUST00000065304 Nup210lQ9D2F7 1881 aa8.22□□□□□ -1.09
Rtn3-202ENSMUST00000065304 SrarpQ3ULG3 163 aa8.22□□□□□ -1.09
Rtn3-202ENSMUST00000065304 StrcQ8VIM6 1809 aa8.22□□□□□ -1.09
Rtn3-202ENSMUST00000065304 Gm10549Q3URY4 149 aa8.22□□□□□ -1.09
Rtn3-202ENSMUST00000065304 Lmo4P61969 165 aa8.21□□□□□ -1.09
Rtn3-202ENSMUST00000065304 Ighv2-9A0A075B5Q5 116 aa8.21□□□□□ -1.1
Rtn3-202ENSMUST00000065304 Gm10226O88253 85 aa8.21□□□□□ -1.1
Rtn3-202ENSMUST00000065304 A730009L09RikA0A1B0GS82 72 aa8.21□□□□□ -1.1
Retrieved 100 of 22,080 RNA–protein pairs in 62.6 ms