RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Leap2Q91V13 76 aa6□□□□□ -1.45
Clcn3-202ENSMUST00000056508 Scn2aA0A0J9YTW6 2006 aa6□□□□□ -1.45
Clcn3-202ENSMUST00000056508 Nup98Q6PFD9 1816 aaKnown RBP6□□□□□ -1.45
Clcn3-202ENSMUST00000056508 Heatr1G3X9B1 2143 aaKnown RBP5.99□□□□□ -1.45
Clcn3-202ENSMUST00000056508 Dock2Q8C3J5 1828 aa5.99□□□□□ -1.45
Clcn3-202ENSMUST00000056508 Nhsl1Q8CAF4 1587 aa5.99□□□□□ -1.45
Clcn3-202ENSMUST00000056508 Gm10322F7D7I4 111 aa5.99□□□□□ -1.45
Clcn3-202ENSMUST00000056508 Unc13cQ8K0T7 2210 aa5.99□□□□□ -1.45
Clcn3-202ENSMUST00000056508 Cystm1Q8K353 104 aa5.99□□□□□ -1.45
Clcn3-202ENSMUST00000056508 Brwd3A2AHJ4 1799 aa5.98□□□□□ -1.45
Clcn3-202ENSMUST00000056508 NpbQ8K4P1 119 aa5.98□□□□□ -1.45
Clcn3-202ENSMUST00000056508 OtofQ9ESF1 1997 aa5.98□□□□□ -1.45
Clcn3-202ENSMUST00000056508 Nup205A0A0J9YUD5 2061 aaKnown RBP5.98□□□□□ -1.45
Clcn3-202ENSMUST00000056508 Gm21748Q3UE70 102 aa5.97□□□□□ -1.45
Clcn3-202ENSMUST00000056508 Eif4ebp1Q60876 117 aa5.97□□□□□ -1.45
Clcn3-202ENSMUST00000056508 Espl1P60330 2118 aa5.97□□□□□ -1.45
Clcn3-202ENSMUST00000056508 Ltbp4Q8K4G1 1666 aa5.97□□□□□ -1.45
Clcn3-202ENSMUST00000056508 Usp34Q6ZQ93 3582 aa5.97□□□□□ -1.45
Clcn3-202ENSMUST00000056508 Dennd4cA6H8H2 1906 aa5.97□□□□□ -1.45
Clcn3-202ENSMUST00000056508 Rpl39P62892 51 aa5.96□□□□□ -1.45
Clcn3-202ENSMUST00000056508 Krtap3-2Q9D638 99 aa5.96□□□□□ -1.45
Clcn3-202ENSMUST00000056508 Krtap3-3Q9D7P0 99 aa5.96□□□□□ -1.45
Clcn3-202ENSMUST00000056508 Prok2Q9QXU7 128 aa5.96□□□□□ -1.45
Clcn3-202ENSMUST00000056508 Ly6g6cQ9Z1Q4 126 aa5.96□□□□□ -1.46
Clcn3-202ENSMUST00000056508 4930507D05RikQ8C9C9 103 aa5.96□□□□□ -1.46
Clcn3-202ENSMUST00000056508 Snrnp200Q6P4T2 2136 aaKnown RBP5.95□□□□□ -1.46
Clcn3-202ENSMUST00000056508 Dock7Q8R1A4 2130 aaKnown RBP5.95□□□□□ -1.46
Clcn3-202ENSMUST00000056508 Igkv1-88A0A140T8N1 120 aa5.95□□□□□ -1.46
Clcn3-202ENSMUST00000056508 Adamtsl3G3UXC7 1706 aa5.95□□□□□ -1.46
Clcn3-202ENSMUST00000056508 Ice1E9Q286 2241 aaKnown RBP5.95□□□□□ -1.46
Clcn3-202ENSMUST00000056508 9930021J03RikH3BKP8 2027 aa5.95□□□□□ -1.46
Clcn3-202ENSMUST00000056508 Ank1Q02357 1862 aa5.95□□□□□ -1.46
Clcn3-202ENSMUST00000056508 Cox7bP56393 80 aa5.95□□□□□ -1.46
Clcn3-202ENSMUST00000056508 SrcapA0A087WQ44 3271 aa5.95□□□□□ -1.46
Clcn3-202ENSMUST00000056508 Kmt2eQ3UG20 1868 aa5.94□□□□□ -1.46
Clcn3-202ENSMUST00000056508 Prr14lE9Q7C4 1971 aa5.94□□□□□ -1.46
Clcn3-202ENSMUST00000056508 Nrxn2E9Q7X7 1710 aa5.94□□□□□ -1.46
Clcn3-202ENSMUST00000056508 Cdc42se2Q8BGH7 84 aa5.94□□□□□ -1.46
Clcn3-202ENSMUST00000056508 NrapQ80XB4 1728 aa5.94□□□□□ -1.46
Clcn3-202ENSMUST00000056508 Ltbp2O08999 1813 aa5.94□□□□□ -1.46
Clcn3-202ENSMUST00000056508 P01643 108 aa5.94□□□□□ -1.46
Clcn3-202ENSMUST00000056508 Defb3Q9WTL0 63 aa5.93□□□□□ -1.46
Clcn3-202ENSMUST00000056508 Myo9bQ9QY06 2114 aa5.93□□□□□ -1.46
Clcn3-202ENSMUST00000056508 Arhgef17Q80U35 2057 aa5.93□□□□□ -1.46
Clcn3-202ENSMUST00000056508 4930519P11RikQ9CUJ8 166 aa5.92□□□□□ -1.46
Clcn3-202ENSMUST00000056508 Polr2aP08775 1970 aaKnown RBP5.92□□□□□ -1.46
Clcn3-202ENSMUST00000056508 A330070K13RikQ8CA53 115 aa5.92□□□□□ -1.46
Clcn3-202ENSMUST00000056508 Arid2E9Q7E2 1828 aa5.92□□□□□ -1.46
Clcn3-202ENSMUST00000056508 OdaphJ3QNT8 126 aa5.92□□□□□ -1.46
Clcn3-202ENSMUST00000056508 Prp2P05143 317 aa5.92□□□□□ -1.46
Clcn3-202ENSMUST00000056508 U90926O08546 118 aa5.91□□□□□ -1.46
Clcn3-202ENSMUST00000056508 Wfdc13Q5DQQ6 81 aa5.91□□□□□ -1.46
Clcn3-202ENSMUST00000056508 Q8BT88 171 aa5.91□□□□□ -1.46
Clcn3-202ENSMUST00000056508 Sdk1Q3UH53 2193 aa5.91□□□□□ -1.46
Clcn3-202ENSMUST00000056508 PappaQ8R4K8 1624 aa5.91□□□□□ -1.46
Clcn3-202ENSMUST00000056508 Taf1Q80UV9 1891 aa5.9□□□□□ -1.46
Clcn3-202ENSMUST00000056508 DysfQ9ESD7 2090 aa5.9□□□□□ -1.46
Clcn3-202ENSMUST00000056508 Smim29Q8R043 75 aa5.9□□□□□ -1.46
Clcn3-202ENSMUST00000056508 NacaP70670 2187 aaKnown RBP5.9□□□□□ -1.47
Clcn3-202ENSMUST00000056508 Wnk2Q3UH66 2149 aa5.9□□□□□ -1.47
Clcn3-202ENSMUST00000056508 Defb33Q30KN3 62 aa5.9□□□□□ -1.47
Clcn3-202ENSMUST00000056508 Nop10Q9CQS2 64 aa5.9□□□□□ -1.47
Clcn3-202ENSMUST00000056508 Kif26aQ52KG5 1881 aa5.89□□□□□ -1.47
Clcn3-202ENSMUST00000056508 Gm10226O88253 85 aa5.89□□□□□ -1.47
Clcn3-202ENSMUST00000056508 Gon4lQ9DB00 2260 aa5.89□□□□□ -1.47
Clcn3-202ENSMUST00000056508 Gm10509O88255 85 aa5.89□□□□□ -1.47
Clcn3-202ENSMUST00000056508 Gm10384Q3UQ87 92 aa5.89□□□□□ -1.47
Clcn3-202ENSMUST00000056508 Ralgapa2A3KGS3 1872 aa5.89□□□□□ -1.47
Clcn3-202ENSMUST00000056508 Kif26bQ7TNC6 2112 aa5.88□□□□□ -1.47
Clcn3-202ENSMUST00000056508 Igkv9-123A0A140T8N8 117 aa5.88□□□□□ -1.47
Clcn3-202ENSMUST00000056508 Prol1E9PYQ4 312 aa5.88□□□□□ -1.47
Clcn3-202ENSMUST00000056508 Ndufa4l2Q4FZG9 87 aa5.88□□□□□ -1.47
Clcn3-202ENSMUST00000056508 Gm10845Q3UNY9 185 aa5.88□□□□□ -1.47
Clcn3-202ENSMUST00000056508 Spag11Q8K4N2 71 aa5.88□□□□□ -1.47
Clcn3-202ENSMUST00000056508 Gm37988J3QM41 62 aa5.87□□□□□ -1.47
Clcn3-202ENSMUST00000056508 Gm10553J3QPF1 123 aa5.87□□□□□ -1.47
Clcn3-202ENSMUST00000056508 Plxnb2B2RXS4 1842 aa5.87□□□□□ -1.47
Clcn3-202ENSMUST00000056508 FAM186AQ9D9R9 1790 aa5.87□□□□□ -1.47
Clcn3-202ENSMUST00000056508 PrlhG3UWC3 86 aa5.87□□□□□ -1.47
Clcn3-202ENSMUST00000056508 PhipQ8VDD9 1821 aaKnown RBP5.86□□□□□ -1.47
Clcn3-202ENSMUST00000056508 Defb26Q30KN7 186 aa5.86□□□□□ -1.47
Clcn3-202ENSMUST00000056508 Gm21060J3KMU4 56 aa5.86□□□□□ -1.47
Clcn3-202ENSMUST00000056508 Nup214Q80U93 2085 aa5.86□□□□□ -1.47
Clcn3-202ENSMUST00000056508 IgipA0A1B0GR74 53 aa5.85□□□□□ -1.47
Clcn3-202ENSMUST00000056508 SvilQ8K4L3 2170 aa5.84□□□□□ -1.47
Clcn3-202ENSMUST00000056508 Kntc1Q8C3Y4 2207 aa5.84□□□□□ -1.47
Clcn3-202ENSMUST00000056508 PrcdQ00LT2 53 aa5.84□□□□□ -1.47
Clcn3-202ENSMUST00000056508 Gm10308Q9CVR5 141 aa5.84□□□□□ -1.47
Clcn3-202ENSMUST00000056508 Fam168bQ80XQ8 194 aa5.84□□□□□ -1.48
Clcn3-202ENSMUST00000056508 Mrpl34Q99N91 92 aa5.83□□□□□ -1.48
Clcn3-202ENSMUST00000056508 Sdk2Q6V4S5 2176 aa5.83□□□□□ -1.48
Clcn3-202ENSMUST00000056508 Ep400Q8CHI8 3072 aaKnown RBP5.83□□□□□ -1.48
Clcn3-202ENSMUST00000056508 Sipa1l3G3X9J0 1776 aa5.83□□□□□ -1.48
Clcn3-202ENSMUST00000056508 Gm10267M0QWD8 85 aa5.82□□□□□ -1.48
Clcn3-202ENSMUST00000056508 Greb1lB9EJV3 1913 aa5.82□□□□□ -1.48
Clcn3-202ENSMUST00000056508 Tnks1bp1P58871 1720 aa5.82□□□□□ -1.48
Clcn3-202ENSMUST00000056508 Btaf1E9QAE3 1848 aa5.81□□□□□ -1.48
Clcn3-202ENSMUST00000056508 Atad5Q4QY64 1826 aa5.81□□□□□ -1.48
Clcn3-202ENSMUST00000056508 Znf318Q99PP2 2237 aa5.81□□□□□ -1.48
Clcn3-202ENSMUST00000056508 Bcorl1A2AQH4 1781 aa5.81□□□□□ -1.48
Retrieved 100 of 22,080 RNA–protein pairs in 37.4 ms