RNA–Protein interactions for RNA: ENSMUST00000045312.5

Smc1a-201, Transcript of Structural maintenance of chromosomes protein 1A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smc1a, Length 4,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1a-201ENSMUST00000045312 Ccl21bP86792 133 aa5.27□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Ccl21cP86793 133 aa5.27□□□□□ -1.57
Smc1a-201ENSMUST00000045312 4930518I15RikQ3V2W7 57 aa5.26□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Q99M08 65 aa5.26□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Ighv1-62-1A0A075B5U3 116 aa5.26□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Ighv2-6-8A0A0A6YWY9 116 aa5.26□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Gm26566Q8CAC1 153 aa5.26□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Tns1E9Q0S6 1888 aaKnown RBP5.26□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Ighv3-1A0A075B5S6 116 aa5.26□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Vpreb3D3Z6J4 130 aa5.26□□□□□ -1.57
Smc1a-201ENSMUST00000045312 P06320 134 aa5.26□□□□□ -1.57
Smc1a-201ENSMUST00000045312 9130230L23RikQ8CC80 163 aa5.26□□□□□ -1.57
Smc1a-201ENSMUST00000045312 9430015G10RikA2ASP7 199 aa5.26□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Tcte2E9PY37 120 aa5.26□□□□□ -1.57
Smc1a-201ENSMUST00000045312 P01643 108 aa5.26□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Ube2bP63147 152 aa5.25□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Igkv8-26A0A075B5N5 123 aa5.25□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Gm6899Q3USS0 134 aa5.25□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Smr3aQ61900 147 aa5.25□□□□□ -1.57
Smc1a-201ENSMUST00000045312 CnfnQ6PCW6 111 aa5.25□□□□□ -1.57
Smc1a-201ENSMUST00000045312 2010109I03RikQ9CQ11 111 aa5.25□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Myo9aQ8C170 2542 aa5.25□□□□□ -1.57
Smc1a-201ENSMUST00000045312 H2al1bA0A087WP11 105 aa5.24□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Zfand3Q497H0 227 aa5.24□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Lrp4Q8VI56 1905 aa5.24□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Atox1O08997 68 aaKnown RBP5.24□□□□□ -1.57
Smc1a-201ENSMUST00000045312 4930524J08RikQ9CUJ5 163 aa5.24□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Ighv1-66A0A075B5X5 117 aa5.24□□□□□ -1.57
Smc1a-201ENSMUST00000045312 H2al1aQ5M8Q2 105 aa5.24□□□□□ -1.57
Smc1a-201ENSMUST00000045312 H2al1eQ810S6 105 aa5.24□□□□□ -1.57
Smc1a-201ENSMUST00000045312 1700011M02RikB1AX35 88 aa5.24□□□□□ -1.57
Smc1a-201ENSMUST00000045312 H2al1kJ3QP08 105 aa5.24□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Pglyrp1O88593 182 aa5.24□□□□□ -1.57
Smc1a-201ENSMUST00000045312 B430305J03RikQ8BQQ8 176 aa5.24□□□□□ -1.57
Smc1a-201ENSMUST00000045312 BaalcQ8VHV1 145 aa5.24□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Q9CX25 107 aa5.24□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Gm10647E9Q8X0 124 aa5.23□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Tfpi2O35536 230 aa5.23□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Pla2g2cP48076 150 aa5.23□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Fam19a1Q7TPG8 133 aa5.23□□□□□ -1.57
Smc1a-201ENSMUST00000045312 9530003J23RikQ8BM26 151 aa5.23□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Tm2d2Q8R0I4 213 aa5.23□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Sptbn4E9PX29 2561 aa5.23□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Usp9xP70398 2559 aaKnown RBP5.23□□□□□ -1.57
Smc1a-201ENSMUST00000045312 P01820 115 aa5.23□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Gm5153P01627 120 aa5.23□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Gm37389A0A0A6YW05 95 aa5.23□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Igkv8-34A0A0G2JDU0 121 aa5.23□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Gm15557A6PWY0 234 aa5.23□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Gm21994F6T2D2 329 aa5.22□□□□□ -1.57
Smc1a-201ENSMUST00000045312 PrcdQ00LT2 53 aa5.22□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Rps28P62858 69 aaKnown RBP5.22□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Gm17577J3QNF7 156 aa5.22□□□□□ -1.57
Smc1a-201ENSMUST00000045312 SbsponQ3UPR9 264 aa5.22□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Igkv4-92A0A0B4J1I2 117 aa5.21□□□□□ -1.57
Smc1a-201ENSMUST00000045312 P01755 137 aa5.21□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Gm10577Q3UDV9 132 aa5.21□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Gm10735Q3US96 136 aa5.21□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Igkv8-18A0A0B4J1J3 123 aa5.21□□□□□ -1.58
Smc1a-201ENSMUST00000045312 Gm11011D3Z3L9 86 aa5.21□□□□□ -1.58
Smc1a-201ENSMUST00000045312 Lce6aD3YV94 81 aa5.21□□□□□ -1.58
Smc1a-201ENSMUST00000045312 4930470P17RikQ9D542 155 aa5.21□□□□□ -1.58
Smc1a-201ENSMUST00000045312 GfyJ3KML8 504 aa5.21□□□□□ -1.58
Smc1a-201ENSMUST00000045312 Camk2n2Q78WH7 79 aa5.21□□□□□ -1.58
Smc1a-201ENSMUST00000045312 Chd8Q09XV5 2582 aaKnown RBP5.2□□□□□ -1.58
Smc1a-201ENSMUST00000045312 LhbO09108 141 aa5.2□□□□□ -1.58
Smc1a-201ENSMUST00000045312 Golgb1E9PVZ8 3238 aa5.2□□□□□ -1.58
Smc1a-201ENSMUST00000045312 Gm17521F6QAC8 156 aa5.2□□□□□ -1.58
Smc1a-201ENSMUST00000045312 Eif4ebp1Q60876 117 aa5.2□□□□□ -1.58
Smc1a-201ENSMUST00000045312 Ufsp1Q9CZP0 217 aa5.2□□□□□ -1.58
Smc1a-201ENSMUST00000045312 UqcrqQ9CQ69 82 aa5.2□□□□□ -1.58
Smc1a-201ENSMUST00000045312 Trav9n-4A0A075B631 113 aa5.19□□□□□ -1.58
Smc1a-201ENSMUST00000045312 Gm9805F6YK59 57 aa5.19□□□□□ -1.58
Smc1a-201ENSMUST00000045312 Gphb5Q812B2 130 aa5.19□□□□□ -1.58
Smc1a-201ENSMUST00000045312 Spint4Q9D263 159 aa5.19□□□□□ -1.58
Smc1a-201ENSMUST00000045312 Ighv2-3A0A075B696 115 aa5.19□□□□□ -1.58
Smc1a-201ENSMUST00000045312 Ighv3-3A0A0A6YWL2 116 aa5.19□□□□□ -1.58
Smc1a-201ENSMUST00000045312 Ighv1-5A0A0A6YWG2 117 aa5.19□□□□□ -1.58
Smc1a-201ENSMUST00000045312 Gm10401E9Q3K6 71 aa5.19□□□□□ -1.58
Smc1a-201ENSMUST00000045312 4930546C10RikE9Q4Y3 121 aa5.19□□□□□ -1.58
Smc1a-201ENSMUST00000045312 Ntn5Q3UQ22 452 aa5.19□□□□□ -1.58
Smc1a-201ENSMUST00000045312 NrgnP60761 78 aa5.18□□□□□ -1.58
Smc1a-201ENSMUST00000045312 Defb45Q3V490 66 aa5.18□□□□□ -1.58
Smc1a-201ENSMUST00000045312 Notch2O35516 2470 aa5.18□□□□□ -1.58
Smc1a-201ENSMUST00000045312 Ighv10-1A0A0B4J1J6 119 aa5.18□□□□□ -1.58
Smc1a-201ENSMUST00000045312 Fgfbp3Q1HCM0 245 aa5.18□□□□□ -1.58
Smc1a-201ENSMUST00000045312 Defb40Q70KL2 73 aa5.18□□□□□ -1.58
Smc1a-201ENSMUST00000045312 Gm10300Q8C8P7 189 aa5.18□□□□□ -1.58
Smc1a-201ENSMUST00000045312 Rpl28P41105 137 aaKnown RBP5.18□□□□□ -1.58
Smc1a-201ENSMUST00000045312 Lmo4P61969 165 aa5.18□□□□□ -1.58
Smc1a-201ENSMUST00000045312 Sslp1Q3UN54 99 aa5.18□□□□□ -1.58
Smc1a-201ENSMUST00000045312 Wisp2Q9Z0G4 251 aa5.18□□□□□ -1.58
Smc1a-201ENSMUST00000045312 Gm9573F7C950 1606 aa5.18□□□□□ -1.58
Smc1a-201ENSMUST00000045312 Gm20604F8WIA3 75 aa5.18□□□□□ -1.58
Smc1a-201ENSMUST00000045312 Gm10845Q3UNY9 185 aa5.18□□□□□ -1.58
Smc1a-201ENSMUST00000045312 Cox7b2Q9D2H1 82 aa5.18□□□□□ -1.58
Smc1a-201ENSMUST00000045312 Esm1Q9QYY7 184 aa5.18□□□□□ -1.58
Smc1a-201ENSMUST00000045312 Klk11Q9QYN3 276 aa5.17□□□□□ -1.58
Smc1a-201ENSMUST00000045312 Igkv1-110A0A0B4J1I0 119 aa5.17□□□□□ -1.58
Smc1a-201ENSMUST00000045312 A530084C06RikQ3UTW2 186 aa5.17□□□□□ -1.58
Retrieved 100 of 22,080 RNA–protein pairs in 58.6 ms