RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Fgf23Q9EPC2 251 aa16.1■□□□□ 0.17
Cln6-201ENSMUST00000034776 Hivep1Q03172 2688 aa16.1■□□□□ 0.17
Cln6-201ENSMUST00000034776 Gm6812B1AXU1 112 aa16.09■□□□□ 0.17
Cln6-201ENSMUST00000034776 Stab1Q8R4Y4 2571 aa16.09■□□□□ 0.17
Cln6-201ENSMUST00000034776 Trav13d-1A0A075B606 110 aa16.09■□□□□ 0.17
Cln6-201ENSMUST00000034776 Nsd1O88491 2588 aaKnown RBP16.08■□□□□ 0.17
Cln6-201ENSMUST00000034776 Defa13P50711 93 aa16.08■□□□□ 0.16
Cln6-201ENSMUST00000034776 Foxc1Q61572 553 aa16.08■□□□□ 0.16
Cln6-201ENSMUST00000034776 Rbmxl2Q9DAE2 385 aaKnown RBP16.08■□□□□ 0.16
Cln6-201ENSMUST00000034776 Gm26602M0QWA4 95 aa16.07■□□□□ 0.16
Cln6-201ENSMUST00000034776 Klk11Q9QYN3 276 aa16.07■□□□□ 0.16
Cln6-201ENSMUST00000034776 Notch2O35516 2470 aa16.07■□□□□ 0.16
Cln6-201ENSMUST00000034776 C920008G01RikA0A0B4J1N1 112 aa16.06■□□□□ 0.16
Cln6-201ENSMUST00000034776 4930546C10RikE9Q4Y3 121 aa16.06■□□□□ 0.16
Cln6-201ENSMUST00000034776 Gm26727M0QWT1 121 aa16.06■□□□□ 0.16
Cln6-201ENSMUST00000034776 Srsf9Q9D0B0 222 aaKnown RBP16.06■□□□□ 0.16
Cln6-201ENSMUST00000034776 Cd33Q63994 403 aa16.06■□□□□ 0.16
Cln6-201ENSMUST00000034776 MobpQ9D2P8 170 aa16.06■□□□□ 0.16
Cln6-201ENSMUST00000034776 4930442H23RikQ9D5G7 103 aa16.06■□□□□ 0.16
Cln6-201ENSMUST00000034776 Tmem238A9JSM3 176 aa16.05■□□□□ 0.16
Cln6-201ENSMUST00000034776 Gm904Q3V2L5 102 aa16.05■□□□□ 0.16
Cln6-201ENSMUST00000034776 Gm9242J3QNY1 357 aa16.04■□□□□ 0.16
Cln6-201ENSMUST00000034776 PolP10400 120 aa16.04■□□□□ 0.16
Cln6-201ENSMUST00000034776 Gm20730A0A075B5J6 119 aa16.04■□□□□ 0.16
Cln6-201ENSMUST00000034776 Prelid3aQ8VE85 172 aa16.04■□□□□ 0.16
Cln6-201ENSMUST00000034776 Igkv4-53A0A0G2JFC6 119 aa16.03■□□□□ 0.16
Cln6-201ENSMUST00000034776 E130114P18RikF6S0S7 154 aa16.03■□□□□ 0.16
Cln6-201ENSMUST00000034776 BC048562Q80ZQ7 204 aa16.03■□□□□ 0.16
Cln6-201ENSMUST00000034776 HilpdaQ9JLS0 64 aa16.03■□□□□ 0.16
Cln6-201ENSMUST00000034776 Trav4-3A0A0B4J1K1 110 aa16.01■□□□□ 0.15
Cln6-201ENSMUST00000034776 P01823 113 aa16.01■□□□□ 0.15
Cln6-201ENSMUST00000034776 Atp6v0e2Q91XE7 81 aa16.01■□□□□ 0.15
Cln6-201ENSMUST00000034776 Pgpep1Q9ESW8 209 aa16.01■□□□□ 0.15
Cln6-201ENSMUST00000034776 Ighv1-62-1A0A075B5U3 116 aa16.01■□□□□ 0.15
Cln6-201ENSMUST00000034776 Mtatp8P03930 67 aa16.01■□□□□ 0.15
Cln6-201ENSMUST00000034776 Ly6gP35461 111 aa16.01■□□□□ 0.15
Cln6-201ENSMUST00000034776 Dad1P61804 113 aa16.01■□□□□ 0.15
Cln6-201ENSMUST00000034776 Rmi2Q3UPE3 149 aa16.01■□□□□ 0.15
Cln6-201ENSMUST00000034776 Psors1c2Q80ZC9 134 aa16■□□□□ 0.15
Cln6-201ENSMUST00000034776 Gm933J3QPC1 141 aa15.99■□□□□ 0.15
Cln6-201ENSMUST00000034776 Ccl25O35903 144 aa15.99■□□□□ 0.15
Cln6-201ENSMUST00000034776 PrcdQ00LT2 53 aa15.98■□□□□ 0.15
Cln6-201ENSMUST00000034776 RetnQ99P87 114 aa15.98■□□□□ 0.15
Cln6-201ENSMUST00000034776 Spry2Q9QXV8 315 aa15.98■□□□□ 0.15
Cln6-201ENSMUST00000034776 PolqQ8CGS6 2544 aa15.98■□□□□ 0.15
Cln6-201ENSMUST00000034776 Rpl24Q8BP67 157 aaKnown RBP15.98■□□□□ 0.15
Cln6-201ENSMUST00000034776 Vmo1Q5SXG7 201 aa15.97■□□□□ 0.15
Cln6-201ENSMUST00000034776 Higd2aQ9CQJ1 106 aa15.97■□□□□ 0.15
Cln6-201ENSMUST00000034776 Tspan13Q9D8C2 204 aa15.97■□□□□ 0.15
Cln6-201ENSMUST00000034776 Zfp951A0A087WRH0 451 aa15.97■□□□□ 0.15
Cln6-201ENSMUST00000034776 Phxr5P08399 672 aa15.97■□□□□ 0.15
Cln6-201ENSMUST00000034776 Atp5g3P56384 141 aa15.97■□□□□ 0.15
Cln6-201ENSMUST00000034776 Tac4Q99N14 128 aa15.97■□□□□ 0.15
Cln6-201ENSMUST00000034776 Atp5g1Q9CR84 136 aa15.97■□□□□ 0.15
Cln6-201ENSMUST00000034776 Tomm7Q9D173 55 aa15.97■□□□□ 0.15
Cln6-201ENSMUST00000034776 Odf3l2Q3TZ65 277 aa15.96■□□□□ 0.15
Cln6-201ENSMUST00000034776 9430069I07RikQ9CX21 111 aa15.96■□□□□ 0.15
Cln6-201ENSMUST00000034776 Gm7138L7N2C3 230 aa15.95■□□□□ 0.14
Cln6-201ENSMUST00000034776 4930432M17RikQ3V0W9 174 aa15.95■□□□□ 0.14
Cln6-201ENSMUST00000034776 Gm3238W4VSP7 230 aa15.95■□□□□ 0.14
Cln6-201ENSMUST00000034776 Ighv8-5A0A0A6YY60 119 aa15.95■□□□□ 0.14
Cln6-201ENSMUST00000034776 Gm11444F6QMA6 170 aa15.95■□□□□ 0.14
Cln6-201ENSMUST00000034776 Spink13Q3UTS8 97 aa15.95■□□□□ 0.14
Cln6-201ENSMUST00000034776 Tm2d2Q8R0I4 213 aa15.95■□□□□ 0.14
Cln6-201ENSMUST00000034776 Srrm2Q8BTI8 2703 aaKnown RBP15.94■□□□□ 0.14
Cln6-201ENSMUST00000034776 Timm17bQ9Z0V7 172 aa15.94■□□□□ 0.14
Cln6-201ENSMUST00000034776 ApcQ61315 2845 aa15.94■□□□□ 0.14
Cln6-201ENSMUST00000034776 Kmt2aP55200 3966 aa15.94■□□□□ 0.14
Cln6-201ENSMUST00000034776 NpwA0A1L1STR8 176 aa15.94■□□□□ 0.14
Cln6-201ENSMUST00000034776 Gm6793B2RXM2 351 aa15.94■□□□□ 0.14
Cln6-201ENSMUST00000034776 Prp2P05143 317 aa15.93■□□□□ 0.14
Cln6-201ENSMUST00000034776 Wfdc17Q5SSJ1 76 aa15.93■□□□□ 0.14
Cln6-201ENSMUST00000034776 Morn5Q9DAI9 170 aa15.93■□□□□ 0.14
Cln6-201ENSMUST00000034776 Trbv13-2A0A140T8N6 113 aa15.92■□□□□ 0.14
Cln6-201ENSMUST00000034776 Rbx1P62878 108 aa15.92■□□□□ 0.14
Cln6-201ENSMUST00000034776 Trav4d-3A0A075B625 110 aa15.91■□□□□ 0.14
Cln6-201ENSMUST00000034776 CckP09240 115 aa15.91■□□□□ 0.14
Cln6-201ENSMUST00000034776 Cited1P97769 203 aa15.91■□□□□ 0.14
Cln6-201ENSMUST00000034776 Trav13-4-dv7A0A075B6C2 110 aa15.9■□□□□ 0.14
Cln6-201ENSMUST00000034776 Gm36176A0A1W2P8D5 158 aa15.9■□□□□ 0.14
Cln6-201ENSMUST00000034776 Ighv1-61P01749 117 aa15.9■□□□□ 0.14
Cln6-201ENSMUST00000034776 Trav13n-1A0A0G2JEU8 110 aa15.89■□□□□ 0.13
Cln6-201ENSMUST00000034776 Vps25Q9CQ80 176 aa15.88■□□□□ 0.13
Cln6-201ENSMUST00000034776 Trav11A0A0B4J1J9 114 aa15.87■□□□□ 0.13
Cln6-201ENSMUST00000034776 CirbpP60824 172 aaKnown RBP15.87■□□□□ 0.13
Cln6-201ENSMUST00000034776 1700010B08RikQ9DAI7 102 aa15.87■□□□□ 0.13
Cln6-201ENSMUST00000034776 Rab37Q9JKM7 223 aa15.87■□□□□ 0.13
Cln6-201ENSMUST00000034776 Gm9936Q8C864 160 aa15.86■□□□□ 0.13
Cln6-201ENSMUST00000034776 Defa3P28310 93 aa15.86■□□□□ 0.13
Cln6-201ENSMUST00000034776 Defa10P50708 93 aa15.86■□□□□ 0.13
Cln6-201ENSMUST00000034776 Defa15P50713 93 aa15.86■□□□□ 0.13
Cln6-201ENSMUST00000034776 Zfand2aQ9JII7 171 aa15.86■□□□□ 0.13
Cln6-201ENSMUST00000034776 Glrp1E9Q9S8 174 aa15.85■□□□□ 0.13
Cln6-201ENSMUST00000034776 Tmem223Q9CQE2 199 aaKnown RBP15.85■□□□□ 0.13
Cln6-201ENSMUST00000034776 Ss18l2Q9D174 77 aa15.85■□□□□ 0.13
Cln6-201ENSMUST00000034776 Igkv1-99F6XWB2 120 aa15.84■□□□□ 0.13
Cln6-201ENSMUST00000034776 Slamf6Q9ET39 351 aa15.84■□□□□ 0.13
Cln6-201ENSMUST00000034776 Sprr1bQ62267 153 aa15.83■□□□□ 0.13
Cln6-201ENSMUST00000034776 Gm26920S4R2A5 56 aa15.83■□□□□ 0.13
Cln6-201ENSMUST00000034776 Trav13d-4A0A0G2JFX3 110 aa15.82■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 172.9 ms