RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 Gm21748Q3UE70 102 aa14.74□□□□□ -0.05
Trim47-201ENSMUST00000021120 Prr3Q811B5 190 aaKnown RBP14.74□□□□□ -0.05
Trim47-201ENSMUST00000021120 Mrpl52Q9D0Y8 121 aa14.74□□□□□ -0.05
Trim47-201ENSMUST00000021120 Brwd1Q921C3 2304 aa14.73□□□□□ -0.05
Trim47-201ENSMUST00000021120 P01811 117 aa14.73□□□□□ -0.05
Trim47-201ENSMUST00000021120 Foxc1Q61572 553 aa14.73□□□□□ -0.05
Trim47-201ENSMUST00000021120 Gm9936Q8C864 160 aa14.73□□□□□ -0.05
Trim47-201ENSMUST00000021120 Hspg2Q05793 3707 aaKnown RBP14.72□□□□□ -0.05
Trim47-201ENSMUST00000021120 Ly6gP35461 111 aa14.72□□□□□ -0.05
Trim47-201ENSMUST00000021120 Ifitm1Q9D103 106 aa14.72□□□□□ -0.05
Trim47-201ENSMUST00000021120 Mfap4Q9D1H9 257 aa14.72□□□□□ -0.05
Trim47-201ENSMUST00000021120 Ighv2-6-8A0A0A6YWY9 116 aa14.71□□□□□ -0.05
Trim47-201ENSMUST00000021120 4930564D02RikQ9D4S4 103 aa14.71□□□□□ -0.05
Trim47-201ENSMUST00000021120 Defa2P28309 93 aa14.7□□□□□ -0.06
Trim47-201ENSMUST00000021120 Ube2wQ8VDW4 151 aa14.7□□□□□ -0.06
Trim47-201ENSMUST00000021120 Cd164l2Q9D6W7 172 aa14.7□□□□□ -0.06
Trim47-201ENSMUST00000021120 Krtap27-1E9PX37 202 aa14.7□□□□□ -0.06
Trim47-201ENSMUST00000021120 TtrP07309 147 aa14.7□□□□□ -0.06
Trim47-201ENSMUST00000021120 Cfap126Q6P8X9 189 aa14.7□□□□□ -0.06
Trim47-201ENSMUST00000021120 AI854703Q8BIN3 203 aa14.7□□□□□ -0.06
Trim47-201ENSMUST00000021120 Spata3Q9D9T6 193 aa14.7□□□□□ -0.06
Trim47-201ENSMUST00000021120 Gm29666A0A087WQ99 126 aa14.69□□□□□ -0.06
Trim47-201ENSMUST00000021120 Defb47Q30KN1 79 aa14.69□□□□□ -0.06
Trim47-201ENSMUST00000021120 Hivep3A2A884 2348 aa14.69□□□□□ -0.06
Trim47-201ENSMUST00000021120 Fam19a4Q7TPG5 135 aa14.69□□□□□ -0.06
Trim47-201ENSMUST00000021120 Gatd1Q8BFQ8 220 aa14.69□□□□□ -0.06
Trim47-201ENSMUST00000021120 Rbmy1bQ60990 380 aa14.68□□□□□ -0.06
Trim47-201ENSMUST00000021120 3110070M22RikQ9DAQ7 118 aa14.68□□□□□ -0.06
Trim47-201ENSMUST00000021120 ScxQ64124 207 aa14.68□□□□□ -0.06
Trim47-201ENSMUST00000021120 4930442H23RikQ9D5G7 103 aa14.68□□□□□ -0.06
Trim47-201ENSMUST00000021120 Trav7d-3Q5R1I1 112 aa14.67□□□□□ -0.06
Trim47-201ENSMUST00000021120 Trav4d-3A0A075B625 110 aa14.66□□□□□ -0.06
Trim47-201ENSMUST00000021120 Lyrm9Q3UN90 78 aa14.66□□□□□ -0.06
Trim47-201ENSMUST00000021120 Gm10300Q8C8P7 189 aa14.66□□□□□ -0.06
Trim47-201ENSMUST00000021120 Tmem101Q91VP7 257 aa14.66□□□□□ -0.06
Trim47-201ENSMUST00000021120 A530064D06RikQ8BNV8 229 aa14.65□□□□□ -0.06
Trim47-201ENSMUST00000021120 4930470P17RikQ9D542 155 aa14.65□□□□□ -0.06
Trim47-201ENSMUST00000021120 Synj2bpQ9D6K5 145 aa14.65□□□□□ -0.06
Trim47-201ENSMUST00000021120 Notch3Q61982 2318 aa14.65□□□□□ -0.06
Trim47-201ENSMUST00000021120 Gm11444F6QMA6 170 aa14.65□□□□□ -0.06
Trim47-201ENSMUST00000021120 MalO09198 153 aa14.64□□□□□ -0.07
Trim47-201ENSMUST00000021120 Gm9887F6RFI0 207 aa14.64□□□□□ -0.07
Trim47-201ENSMUST00000021120 Igsf10Q3V1M1 2594 aa14.64□□□□□ -0.07
Trim47-201ENSMUST00000021120 P01786 117 aa14.63□□□□□ -0.07
Trim47-201ENSMUST00000021120 CrygfQ9CXV3 174 aa14.63□□□□□ -0.07
Trim47-201ENSMUST00000021120 Prss58Q8BW11 241 aa14.62□□□□□ -0.07
Trim47-201ENSMUST00000021120 Srrm2Q8BTI8 2703 aaKnown RBP14.61□□□□□ -0.07
Trim47-201ENSMUST00000021120 P01753 117 aa14.61□□□□□ -0.07
Trim47-201ENSMUST00000021120 Atp5g3P56384 141 aa14.61□□□□□ -0.07
Trim47-201ENSMUST00000021120 CenpwQ3URR0 86 aa14.6□□□□□ -0.07
Trim47-201ENSMUST00000021120 Ndufa3Q9CQ91 84 aa14.6□□□□□ -0.07
Trim47-201ENSMUST00000021120 Timm17bQ9Z0V7 172 aa14.6□□□□□ -0.07
Trim47-201ENSMUST00000021120 OdaphJ3QNT8 126 aa14.59□□□□□ -0.07
Trim47-201ENSMUST00000021120 Defa1P11477 93 aa14.59□□□□□ -0.07
Trim47-201ENSMUST00000021120 Zc2hc1bQ9D534 172 aa14.59□□□□□ -0.07
Trim47-201ENSMUST00000021120 Trav4-3A0A0B4J1K1 110 aa14.58□□□□□ -0.07
Trim47-201ENSMUST00000021120 PrlhG3UWC3 86 aa14.58□□□□□ -0.07
Trim47-201ENSMUST00000021120 Spag11Q8K4N2 71 aa14.58□□□□□ -0.07
Trim47-201ENSMUST00000021120 Lypd5Q9D7Z7 256 aa14.58□□□□□ -0.07
Trim47-201ENSMUST00000021120 Gm36176A0A1W2P8D5 158 aa14.58□□□□□ -0.08
Trim47-201ENSMUST00000021120 AngP21570 145 aa14.58□□□□□ -0.08
Trim47-201ENSMUST00000021120 Ighv1-72P01751 139 aa14.57□□□□□ -0.08
Trim47-201ENSMUST00000021120 Rpl35aO55142 110 aa14.56□□□□□ -0.08
Trim47-201ENSMUST00000021120 Rps28P62858 69 aaKnown RBP14.56□□□□□ -0.08
Trim47-201ENSMUST00000021120 Defa16P50714 93 aa14.56□□□□□ -0.08
Trim47-201ENSMUST00000021120 Gm9922Q8C3P1 144 aa14.56□□□□□ -0.08
Trim47-201ENSMUST00000021120 Gm10490F6VBM2 120 aa14.55□□□□□ -0.08
Trim47-201ENSMUST00000021120 Gm10322F7D7I4 111 aa14.55□□□□□ -0.08
Trim47-201ENSMUST00000021120 Ndufs7Q9DC70 224 aa14.55□□□□□ -0.08
Trim47-201ENSMUST00000021120 ApcQ61315 2845 aa14.55□□□□□ -0.08
Trim47-201ENSMUST00000021120 Gm29423A0A087WRM1 55 aa14.54□□□□□ -0.08
Trim47-201ENSMUST00000021120 Gm10509O88255 85 aa14.54□□□□□ -0.08
Trim47-201ENSMUST00000021120 Atp5g1Q9CR84 136 aa14.54□□□□□ -0.08
Trim47-201ENSMUST00000021120 Cox17P56394 63 aa14.54□□□□□ -0.08
Trim47-201ENSMUST00000021120 Rmi2Q3UPE3 149 aa14.54□□□□□ -0.08
Trim47-201ENSMUST00000021120 Ighv1-11A0A0A6YWI9 117 aa14.53□□□□□ -0.08
Trim47-201ENSMUST00000021120 Gata1P17679 413 aa14.53□□□□□ -0.08
Trim47-201ENSMUST00000021120 Fgfbp3Q1HCM0 245 aa14.53□□□□□ -0.08
Trim47-201ENSMUST00000021120 Gm10767Q3TQP0 103 aa14.53□□□□□ -0.08
Trim47-201ENSMUST00000021120 Glrp1E9Q9S8 174 aa14.53□□□□□ -0.08
Trim47-201ENSMUST00000021120 Pglyrp4Q0VB07 374 aa14.52□□□□□ -0.08
Trim47-201ENSMUST00000021120 Trav7-6A0A075B640 112 aa14.51□□□□□ -0.09
Trim47-201ENSMUST00000021120 CrygeQ03740 174 aa14.51□□□□□ -0.09
Trim47-201ENSMUST00000021120 Defa25Q5G864 92 aa14.51□□□□□ -0.09
Trim47-201ENSMUST00000021120 Igkv4-68A0A0B4J1I7 117 aa14.51□□□□□ -0.09
Trim47-201ENSMUST00000021120 Cox6cQ9CPQ1 76 aa14.51□□□□□ -0.09
Trim47-201ENSMUST00000021120 B230217C12RikE9Q3Z1 139 aa14.5□□□□□ -0.09
Trim47-201ENSMUST00000021120 4930415O20RikQ8CDT5 131 aa14.5□□□□□ -0.09
Trim47-201ENSMUST00000021120 Gm9747Q810H1 104 aa14.5□□□□□ -0.09
Trim47-201ENSMUST00000021120 Defb42Q8BVB5 75 aa14.5□□□□□ -0.09
Trim47-201ENSMUST00000021120 Eif4ebp1Q60876 117 aa14.49□□□□□ -0.09
Trim47-201ENSMUST00000021120 Prelid3aQ8VE85 172 aa14.49□□□□□ -0.09
Trim47-201ENSMUST00000021120 Fgf23Q9EPC2 251 aa14.49□□□□□ -0.09
Trim47-201ENSMUST00000021120 Gm20730A0A075B5J6 119 aa14.48□□□□□ -0.09
Trim47-201ENSMUST00000021120 4930432M17RikQ3V0W9 174 aa14.47□□□□□ -0.09
Trim47-201ENSMUST00000021120 Gm7138L7N2C3 230 aa14.47□□□□□ -0.09
Trim47-201ENSMUST00000021120 Gm3238W4VSP7 230 aa14.47□□□□□ -0.09
Trim47-201ENSMUST00000021120 PtprqP0C5E4 2300 aa14.47□□□□□ -0.09
Trim47-201ENSMUST00000021120 Trdv5A0A075B661 115 aa14.46□□□□□ -0.1
Trim47-201ENSMUST00000021120 E130114P18RikF6S0S7 154 aa14.46□□□□□ -0.1
Retrieved 100 of 22,080 RNA–protein pairs in 45.9 ms