RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Igkv4-92A0A0B4J1I2 117 aa6.82□□□□□ -1.32
Ccdc47-201ENSMUST00000002043 Wfdc15aQ8BH89 80 aa6.82□□□□□ -1.32
Ccdc47-201ENSMUST00000002043 BC107364E9Q5A2 140 aa6.82□□□□□ -1.32
Ccdc47-201ENSMUST00000002043 Rbx1P62878 108 aa6.82□□□□□ -1.32
Ccdc47-201ENSMUST00000002043 Apoc4Q61268 124 aa6.82□□□□□ -1.32
Ccdc47-201ENSMUST00000002043 Ly6hQ9WUC3 139 aa6.82□□□□□ -1.32
Ccdc47-201ENSMUST00000002043 Smr3aQ61900 147 aa6.81□□□□□ -1.32
Ccdc47-201ENSMUST00000002043 Zfyve26Q5DU37 2529 aa6.81□□□□□ -1.32
Ccdc47-201ENSMUST00000002043 Edn2P22389 175 aa6.81□□□□□ -1.32
Ccdc47-201ENSMUST00000002043 1700074P13RikQ9D9G7 251 aa6.81□□□□□ -1.32
Ccdc47-201ENSMUST00000002043 Anapc1P53995 1944 aaKnown RBP6.81□□□□□ -1.32
Ccdc47-201ENSMUST00000002043 Igkv8-30A0A140T8M3 121 aa6.8□□□□□ -1.32
Ccdc47-201ENSMUST00000002043 Pla2g2cP48076 150 aa6.8□□□□□ -1.32
Ccdc47-201ENSMUST00000002043 4930556J24RikQ9D4U7 146 aa6.8□□□□□ -1.32
Ccdc47-201ENSMUST00000002043 AcanQ61282 2132 aaKnown RBP6.8□□□□□ -1.32
Ccdc47-201ENSMUST00000002043 A0A286YE49 62 aa6.8□□□□□ -1.32
Ccdc47-201ENSMUST00000002043 P01747 120 aa6.8□□□□□ -1.32
Ccdc47-201ENSMUST00000002043 Dido1Q8C9B9 2256 aaKnown RBP6.8□□□□□ -1.32
Ccdc47-201ENSMUST00000002043 Nup210lQ9D2F7 1881 aa6.8□□□□□ -1.32
Ccdc47-201ENSMUST00000002043 Sprr2jO70561 109 aa6.8□□□□□ -1.32
Ccdc47-201ENSMUST00000002043 Smim1P0C8K7 78 aa6.8□□□□□ -1.32
Ccdc47-201ENSMUST00000002043 Rpl28P41105 137 aaKnown RBP6.8□□□□□ -1.32
Ccdc47-201ENSMUST00000002043 B430305J03RikQ8BQQ8 176 aa6.8□□□□□ -1.32
Ccdc47-201ENSMUST00000002043 NbasE9Q411 2356 aa6.79□□□□□ -1.32
Ccdc47-201ENSMUST00000002043 MgamB5THE2 1827 aa6.79□□□□□ -1.32
Ccdc47-201ENSMUST00000002043 1700056E22RikF7CNM6 234 aa6.79□□□□□ -1.32
Ccdc47-201ENSMUST00000002043 H2al1mQ9DAD9 105 aa6.79□□□□□ -1.32
Ccdc47-201ENSMUST00000002043 1520401A03RikA0A0J9YVH6 598 aa6.79□□□□□ -1.32
Ccdc47-201ENSMUST00000002043 Prr12E9PYL2 2035 aaKnown RBP6.79□□□□□ -1.32
Ccdc47-201ENSMUST00000002043 Fhl2O70433 279 aa6.78□□□□□ -1.32
Ccdc47-201ENSMUST00000002043 Dscaml1Q4VA61 2053 aa6.78□□□□□ -1.32
Ccdc47-201ENSMUST00000002043 Ube2d2P62838 147 aa6.78□□□□□ -1.32
Ccdc47-201ENSMUST00000002043 UqcrqQ9CQ69 82 aa6.78□□□□□ -1.32
Ccdc47-201ENSMUST00000002043 2310009B15RikA0A0A6YWI4 143 aa6.77□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 Igkv1-110A0A0B4J1I0 119 aa6.77□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 Ly6c2P0CW03 131 aa6.77□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 SycnQ8VCK7 134 aa6.77□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 4930564D02RikQ9D4S4 103 aa6.77□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 Ube2d1P61080 147 aaKnown RBP6.77□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 Lypd6Q8BPP5 171 aa6.77□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 Nav2E9Q842 2432 aa6.77□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 Gm11011D3Z3L9 86 aa6.77□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 Arhgap21Q6DFV3 1944 aa6.77□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 ColqO35348 457 aa6.77□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 PtprqP0C5E4 2300 aa6.76□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 Sh2d1aO88890 126 aa6.76□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 Nav3Q80TN7 2359 aa6.76□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 Gm9925F6T2U3 160 aa6.76□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 Gm9922Q8C3P1 144 aa6.76□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 Gm8439G3UWA7 96 aa6.76□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 Igkv1-117A0A140T8M0 119 aa6.75□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 Trav14-1A0A0G2JF94 121 aa6.75□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 Gm10509O88255 85 aa6.75□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 AcacbE9Q4Z2 2448 aa6.75□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 C2cd3Q52KB6 2323 aa6.75□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 Ube2d3P61079 147 aa6.75□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 Esm1Q9QYY7 184 aa6.75□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 NpwA0A1L1STR8 176 aa6.75□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 TshbP12656 138 aa6.75□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 Ighv10-3A0A075B5T6 119 aa6.74□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 P06329 120 aa6.74□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 Rai1Q61818 1889 aa6.74□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 Cdc42se2Q8BGH7 84 aa6.74□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 H2al1kJ3QP08 105 aa6.74□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 Tet1Q3URK3 2007 aaKnown RBP6.74□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 BC067074F6RXI4 2391 aa6.74□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 Hivep2Q3UHF7 2430 aa6.74□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 Krtap27-1E9PX37 202 aa6.73□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 Notch2O35516 2470 aa6.73□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 Gm6899Q3USS0 134 aa6.73□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 PscaP57096 123 aa6.73□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 Shisa2Q8QZV2 295 aa6.72□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 Fam19a5Q91WE9 132 aa6.72□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 Abca2P41234 2434 aa6.72□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 Pla2g1bQ9Z0Y2 146 aa6.72□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 Defb42Q8BVB5 75 aa6.72□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 Gm10549Q3URY4 149 aa6.72□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 Sdk1Q3UH53 2193 aa6.71□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 Igkv3-12A0A140T8P0 119 aa6.71□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 LhbO09108 141 aa6.71□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 Nupr2Q497P3 102 aa6.71□□□□□ -1.33
Ccdc47-201ENSMUST00000002043 2010109I03RikQ9CQ11 111 aa6.71□□□□□ -1.34
Ccdc47-201ENSMUST00000002043 Notch4P31695 1964 aa6.71□□□□□ -1.34
Ccdc47-201ENSMUST00000002043 HelzQ6DFV5 1964 aaKnown RBP6.71□□□□□ -1.34
Ccdc47-201ENSMUST00000002043 1700011M02RikB1AX35 88 aa6.71□□□□□ -1.34
Ccdc47-201ENSMUST00000002043 Gm10845Q3UNY9 185 aa6.71□□□□□ -1.34
Ccdc47-201ENSMUST00000002043 Nup210Q9QY81 1886 aaKnown RBP6.7□□□□□ -1.34
Ccdc47-201ENSMUST00000002043 Gm9887F6RFI0 207 aa6.7□□□□□ -1.34
Ccdc47-201ENSMUST00000002043 Gm1968Q3T9I3 115 aa6.7□□□□□ -1.34
Ccdc47-201ENSMUST00000002043 Pcdh15Q99PJ1 1943 aa6.7□□□□□ -1.34
Ccdc47-201ENSMUST00000002043 Ovol3D3YYM0 189 aa6.7□□□□□ -1.34
Ccdc47-201ENSMUST00000002043 DscamQ9ERC8 2013 aa6.7□□□□□ -1.34
Ccdc47-201ENSMUST00000002043 Col24a1Q30D77 1733 aa6.7□□□□□ -1.34
Ccdc47-201ENSMUST00000002043 Gm10490F6VBM2 120 aa6.7□□□□□ -1.34
Ccdc47-201ENSMUST00000002043 Smrp1Q2MH31 260 aa6.7□□□□□ -1.34
Ccdc47-201ENSMUST00000002043 Q9DAB9 146 aa6.7□□□□□ -1.34
Ccdc47-201ENSMUST00000002043 Col5a3Q9JLI2 1739 aa6.7□□□□□ -1.34
Ccdc47-201ENSMUST00000002043 Ighv2-9A0A075B5Q5 116 aa6.7□□□□□ -1.34
Ccdc47-201ENSMUST00000002043 Igkv8-28A0A0G2JE47 121 aa6.69□□□□□ -1.34
Ccdc47-201ENSMUST00000002043 Ttc28Q80XJ3 2450 aa6.69□□□□□ -1.34
Retrieved 100 of 22,080 RNA–protein pairs in 32.5 ms