RNA–Protein interactions for RNA: ENSMUST00000211788.1

Ptpre-208, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

TSL 1 (best) BASIC

Gene Ptpre, Length 2,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-208ENSMUST00000211788 Gm10767Q3TQP0 103 aa7.8□□□□□ -1.16
Ptpre-208ENSMUST00000211788 Ss18Q62280 418 aa7.8□□□□□ -1.16
Ptpre-208ENSMUST00000211788 Arhgap32Q811P8 2089 aa7.79□□□□□ -1.16
Ptpre-208ENSMUST00000211788 Ighv1-50A0A075B5W1 117 aa7.79□□□□□ -1.16
Ptpre-208ENSMUST00000211788 TshbP12656 138 aa7.79□□□□□ -1.16
Ptpre-208ENSMUST00000211788 Mrpl36Q99N90 102 aa7.79□□□□□ -1.16
Ptpre-208ENSMUST00000211788 Gkn1Q9CR36 201 aa7.79□□□□□ -1.16
Ptpre-208ENSMUST00000211788 Ighv8-11A0A075B5X4 119 aa7.79□□□□□ -1.16
Ptpre-208ENSMUST00000211788 Ighv1-12A0A0A6YXJ9 117 aa7.79□□□□□ -1.16
Ptpre-208ENSMUST00000211788 Gm3618D3Z4P5 127 aa7.79□□□□□ -1.16
Ptpre-208ENSMUST00000211788 Gm11444F6QMA6 170 aa7.79□□□□□ -1.16
Ptpre-208ENSMUST00000211788 1500011B03RikQ3TTH7 73 aa7.79□□□□□ -1.16
Ptpre-208ENSMUST00000211788 4930432M17RikQ3V0W9 174 aa7.79□□□□□ -1.16
Ptpre-208ENSMUST00000211788 Gm2916Q9D9B9 127 aa7.79□□□□□ -1.16
Ptpre-208ENSMUST00000211788 P01747 120 aa7.78□□□□□ -1.16
Ptpre-208ENSMUST00000211788 Wfdc15aQ8BH89 80 aa7.78□□□□□ -1.16
Ptpre-208ENSMUST00000211788 Gm37389A0A0A6YW05 95 aa7.78□□□□□ -1.16
Ptpre-208ENSMUST00000211788 Trbv30A0A0B4J1P1 111 aa7.78□□□□□ -1.16
Ptpre-208ENSMUST00000211788 Gm42674D3YUT9 64 aa7.78□□□□□ -1.16
Ptpre-208ENSMUST00000211788 Ifitm10Q8BR26 201 aa7.78□□□□□ -1.16
Ptpre-208ENSMUST00000211788 Ankrd17Q99NH0 2603 aaKnown RBP7.78□□□□□ -1.16
Ptpre-208ENSMUST00000211788 BC067074F6RXI4 2391 aa7.77□□□□□ -1.17
Ptpre-208ENSMUST00000211788 LhbO09108 141 aa7.77□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Q5BN45 167 aa7.77□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Olfr313Q5NC55 308 aa7.77□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Srsf12Q8C8K3 266 aa7.77□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Arid1bE9Q4N7 2244 aa7.77□□□□□ -1.17
Ptpre-208ENSMUST00000211788 LrbaQ9ESE1 2856 aa7.77□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Sumo2P61957 95 aaKnown RBP7.77□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Foxi2Q3I5G5 311 aa7.77□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Eif4ebp1Q60876 117 aa7.77□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Serp2Q6TAW2 65 aa7.77□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Krtap26-1Q9D7N2 215 aa7.77□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Ighv1-75A0A075B5Y2 117 aa7.76□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Ang3P97802 145 aa7.76□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Tmem14cQ9CQN6 114 aa7.76□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Ighv2-7A0A075B5Q8 116 aa7.75□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Ighv3-3A0A0A6YWL2 116 aa7.75□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Defb2P82020 71 aa7.75□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Prr3Q811B5 190 aaKnown RBP7.75□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Cd164l2Q9D6W7 172 aa7.75□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Dynlrb2Q9DAJ5 96 aa7.75□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Snrpd3P62320 126 aaKnown RBP7.75□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Rpl18aP62717 176 aaKnown RBP7.75□□□□□ -1.17
Ptpre-208ENSMUST00000211788 4930518I15RikQ3V2W7 57 aa7.75□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Myo9aQ8C170 2542 aa7.75□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Ighv1-5A0A0A6YWG2 117 aa7.74□□□□□ -1.17
Ptpre-208ENSMUST00000211788 MifP34884 115 aaKnown RBP7.74□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Gm9922Q8C3P1 144 aa7.74□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Ube2e2Q91W82 201 aa7.74□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Ndufb4Q9CQC7 129 aa7.74□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Unc79Q0KK59 2596 aa7.74□□□□□ -1.17
Ptpre-208ENSMUST00000211788 TrrapQ80YV3 2565 aaKnown RBP7.74□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Trav9-2A0A075B647 113 aa7.74□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Igkv4-74A0A0B4J1I3 119 aa7.74□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Trav9-4A0A0B4J1K2 113 aa7.74□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Mrps12O35680 139 aa7.74□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Hbb-b2P02089 147 aa7.74□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Igf1P05017 153 aa7.74□□□□□ -1.17
Ptpre-208ENSMUST00000211788 P06328 117 aa7.74□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Defb47Q30KN1 79 aa7.74□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Gm16223Q8CBM3 117 aa7.74□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Col7a1Q63870 2944 aa7.74□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Trav7-6A0A075B640 112 aa7.73□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Ighv2-3A0A075B696 115 aa7.73□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Q8R092 253 aa7.73□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Nf1Q04690 2841 aa7.73□□□□□ -1.17
Ptpre-208ENSMUST00000211788 A930009A15RikG3UYI6 118 aa7.73□□□□□ -1.17
Ptpre-208ENSMUST00000211788 7530416G11RikJ3QJX6 159 aa7.73□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Crlf1Q9JM58 425 aa7.73□□□□□ -1.17
Ptpre-208ENSMUST00000211788 C920008G01RikA0A0B4J1N1 112 aa7.72□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Hoxd3P09027 433 aa7.72□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Vpreb1P13372 142 aa7.72□□□□□ -1.17
Ptpre-208ENSMUST00000211788 GhrhP16043 103 aa7.72□□□□□ -1.17
Ptpre-208ENSMUST00000211788 P84751 237 aa7.72□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Ntn5Q3UQ22 452 aa7.72□□□□□ -1.17
Ptpre-208ENSMUST00000211788 CubnQ9JLB4 3623 aa7.72□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Mast4Q811L6 2618 aa7.72□□□□□ -1.17
Ptpre-208ENSMUST00000211788 FlnaQ8BTM8 2647 aaKnown RBP7.72□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Igkv4-62A0A0G2JDW9 117 aa7.72□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Klk1b4P00757 256 aa7.72□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Gm5629P06327 117 aa7.72□□□□□ -1.17
Ptpre-208ENSMUST00000211788 P06329 120 aa7.72□□□□□ -1.17
Ptpre-208ENSMUST00000211788 BC025920Q3US60 128 aa7.72□□□□□ -1.17
Ptpre-208ENSMUST00000211788 D130052B06RikQ3UW13 202 aa7.72□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Timm17bQ9Z0V7 172 aa7.72□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Hivep2Q3UHF7 2430 aa7.71□□□□□ -1.17
Ptpre-208ENSMUST00000211788 Gm29666A0A087WQ99 126 aa7.71□□□□□ -1.18
Ptpre-208ENSMUST00000211788 Timm17aQ9Z0V8 171 aa7.71□□□□□ -1.18
Ptpre-208ENSMUST00000211788 1810032O08RikE9PZV8 113 aa7.7□□□□□ -1.18
Ptpre-208ENSMUST00000211788 CrygaP04345 174 aa7.7□□□□□ -1.18
Ptpre-208ENSMUST00000211788 Ly6gP35461 111 aa7.7□□□□□ -1.18
Ptpre-208ENSMUST00000211788 Sec61gP60060 68 aa7.7□□□□□ -1.18
Ptpre-208ENSMUST00000211788 Cops9Q3U898 57 aa7.7□□□□□ -1.18
Ptpre-208ENSMUST00000211788 Pdzd2E9Q1M1 2796 aa7.7□□□□□ -1.18
Ptpre-208ENSMUST00000211788 Xcl1P47993 114 aa7.7□□□□□ -1.18
Ptpre-208ENSMUST00000211788 Gm10300Q8C8P7 189 aa7.7□□□□□ -1.18
Ptpre-208ENSMUST00000211788 Iah1Q9DB29 249 aa7.7□□□□□ -1.18
Ptpre-208ENSMUST00000211788 BsnO88737 3942 aa7.7□□□□□ -1.18
Ptpre-208ENSMUST00000211788 Gm29423A0A087WRM1 55 aa7.69□□□□□ -1.18
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms