RNA–Protein interactions for RNA: ENSMUST00000055425.14

Phtf1-201, Transcript of Putative homeodomain transcription factor 1, mousemouse

TSL 1 (best) BASIC

Gene Phtf1, Length 3,060 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Phtf1-201ENSMUST00000055425 Igkv4-91A0A075B5L2 119 aa12.19□□□□□ -0.46
Phtf1-201ENSMUST00000055425 Gm9936Q8C864 160 aa12.19□□□□□ -0.46
Phtf1-201ENSMUST00000055425 Notch3Q61982 2318 aa12.19□□□□□ -0.46
Phtf1-201ENSMUST00000055425 Smim20D3Z7Q2 69 aa12.18□□□□□ -0.46
Phtf1-201ENSMUST00000055425 Ighv5-9-1A0A0A6YVS4 126 aa12.18□□□□□ -0.46
Phtf1-201ENSMUST00000055425 B230217C12RikE9Q3Z1 139 aa12.17□□□□□ -0.46
Phtf1-201ENSMUST00000055425 Glrp1E9Q9S8 174 aa12.17□□□□□ -0.46
Phtf1-201ENSMUST00000055425 NrgnP60761 78 aa12.17□□□□□ -0.46
Phtf1-201ENSMUST00000055425 Ly86O88188 162 aa12.16□□□□□ -0.46
Phtf1-201ENSMUST00000055425 Gm10509O88255 85 aa12.16□□□□□ -0.46
Phtf1-201ENSMUST00000055425 Eif4ebp3Q80VV3 101 aa12.16□□□□□ -0.46
Phtf1-201ENSMUST00000055425 PkigO70139 76 aa12.16□□□□□ -0.46
Phtf1-201ENSMUST00000055425 CenpwQ3URR0 86 aa12.16□□□□□ -0.46
Phtf1-201ENSMUST00000055425 Fgf23Q9EPC2 251 aa12.16□□□□□ -0.46
Phtf1-201ENSMUST00000055425 OtogO55225 2910 aa12.15□□□□□ -0.46
Phtf1-201ENSMUST00000055425 Fhl2O70433 279 aa12.15□□□□□ -0.46
Phtf1-201ENSMUST00000055425 Ep300B2RWS6 2412 aa12.15□□□□□ -0.46
Phtf1-201ENSMUST00000055425 Utp20Q5XG71 2788 aaKnown RBP12.14□□□□□ -0.47
Phtf1-201ENSMUST00000055425 Defa1P11477 93 aa12.14□□□□□ -0.47
Phtf1-201ENSMUST00000055425 AngP21570 145 aa12.14□□□□□ -0.47
Phtf1-201ENSMUST00000055425 Igkv4-68A0A0B4J1I7 117 aa12.14□□□□□ -0.47
Phtf1-201ENSMUST00000055425 Mzt1Q8BUR9 78 aa12.13□□□□□ -0.47
Phtf1-201ENSMUST00000055425 Gatd1Q8BFQ8 220 aa12.13□□□□□ -0.47
Phtf1-201ENSMUST00000055425 Gm9747Q810H1 104 aa12.12□□□□□ -0.47
Phtf1-201ENSMUST00000055425 Trav3-4A0A075B654 114 aa12.12□□□□□ -0.47
Phtf1-201ENSMUST00000055425 Ss18l2Q9D174 77 aa12.12□□□□□ -0.47
Phtf1-201ENSMUST00000055425 Psmb8P28063 276 aa12.12□□□□□ -0.47
Phtf1-201ENSMUST00000055425 Cox17P56394 63 aa12.12□□□□□ -0.47
Phtf1-201ENSMUST00000055425 Ube2e2Q91W82 201 aa12.12□□□□□ -0.47
Phtf1-201ENSMUST00000055425 Xlr5cQ9JJR2 179 aa12.12□□□□□ -0.47
Phtf1-201ENSMUST00000055425 Igkv4-78A0A0A6YYE5 119 aa12.11□□□□□ -0.47
Phtf1-201ENSMUST00000055425 Reg3gO09049 174 aa12.11□□□□□ -0.47
Phtf1-201ENSMUST00000055425 Ighv1-72P01751 139 aa12.11□□□□□ -0.47
Phtf1-201ENSMUST00000055425 Tmem213Q08EA8 116 aa12.11□□□□□ -0.47
Phtf1-201ENSMUST00000055425 Fgfbp3Q1HCM0 245 aa12.11□□□□□ -0.47
Phtf1-201ENSMUST00000055425 SpinklQ8CEK3 90 aa12.11□□□□□ -0.47
Phtf1-201ENSMUST00000055425 Trdv5A0A075B661 115 aa12.11□□□□□ -0.47
Phtf1-201ENSMUST00000055425 Chd8Q09XV5 2582 aaKnown RBP12.1□□□□□ -0.47
Phtf1-201ENSMUST00000055425 Ighv1-11A0A0A6YWI9 117 aa12.1□□□□□ -0.47
Phtf1-201ENSMUST00000055425 SvipQ3UZP4 77 aa12.1□□□□□ -0.47
Phtf1-201ENSMUST00000055425 4930442H23RikQ9D5G7 103 aa12.1□□□□□ -0.47
Phtf1-201ENSMUST00000055425 Gm28539A0A087WSL9 92 aa12.09□□□□□ -0.47
Phtf1-201ENSMUST00000055425 Gm26661M0QWV4 156 aa12.09□□□□□ -0.47
Phtf1-201ENSMUST00000055425 Znf740Q6NZQ6 180 aa12.09□□□□□ -0.47
Phtf1-201ENSMUST00000055425 Prelid3aQ8VE85 172 aa12.09□□□□□ -0.47
Phtf1-201ENSMUST00000055425 Ndufa3Q9CQ91 84 aa12.09□□□□□ -0.47
Phtf1-201ENSMUST00000055425 Nav3Q80TN7 2359 aa12.09□□□□□ -0.47
Phtf1-201ENSMUST00000055425 Cox6cQ9CPQ1 76 aa12.09□□□□□ -0.47
Phtf1-201ENSMUST00000055425 H1fxQ80ZM5 188 aa12.09□□□□□ -0.47
Phtf1-201ENSMUST00000055425 AcacbE9Q4Z2 2448 aa12.09□□□□□ -0.47
Phtf1-201ENSMUST00000055425 Trav9n-2A0A0G2JDP3 113 aa12.08□□□□□ -0.48
Phtf1-201ENSMUST00000055425 Spry2Q9QXV8 315 aa12.08□□□□□ -0.48
Phtf1-201ENSMUST00000055425 Gm10542F6XDR3 90 aa12.08□□□□□ -0.48
Phtf1-201ENSMUST00000055425 Gm10322F7D7I4 111 aa12.08□□□□□ -0.48
Phtf1-201ENSMUST00000055425 Foxc1Q61572 553 aa12.08□□□□□ -0.48
Phtf1-201ENSMUST00000055425 Tmem101Q91VP7 257 aa12.08□□□□□ -0.48
Phtf1-201ENSMUST00000055425 Trav13n-1A0A0G2JEU8 110 aa12.07□□□□□ -0.48
Phtf1-201ENSMUST00000055425 Dmbt1Q60997 2085 aa12.07□□□□□ -0.48
Phtf1-201ENSMUST00000055425 Gm867A0A1W2P7T4 151 aa12.07□□□□□ -0.48
Phtf1-201ENSMUST00000055425 Defa2P28309 93 aa12.07□□□□□ -0.48
Phtf1-201ENSMUST00000055425 Smim10l1A0A087WNQ7 89 aa12.06□□□□□ -0.48
Phtf1-201ENSMUST00000055425 Eif4ebp1Q60876 117 aa12.06□□□□□ -0.48
Phtf1-201ENSMUST00000055425 4930470P17RikQ9D542 155 aa12.06□□□□□ -0.48
Phtf1-201ENSMUST00000055425 Timm17bQ9Z0V7 172 aa12.06□□□□□ -0.48
Phtf1-201ENSMUST00000055425 Igfn1Q3KNY0 2849 aa12.06□□□□□ -0.48
Phtf1-201ENSMUST00000055425 Usp9xP70398 2559 aaKnown RBP12.06□□□□□ -0.48
Phtf1-201ENSMUST00000055425 Trav4-3A0A0B4J1K1 110 aa12.06□□□□□ -0.48
Phtf1-201ENSMUST00000055425 Rnf183Q8QZS5 190 aa12.06□□□□□ -0.48
Phtf1-201ENSMUST00000055425 Ly6hQ9WUC3 139 aa12.06□□□□□ -0.48
Phtf1-201ENSMUST00000055425 FlncQ8VHX6 2726 aaKnown RBP12.06□□□□□ -0.48
Phtf1-201ENSMUST00000055425 Trav4d-3A0A075B625 110 aa12.05□□□□□ -0.48
Phtf1-201ENSMUST00000055425 Defa16P50714 93 aa12.05□□□□□ -0.48
Phtf1-201ENSMUST00000055425 Gm10735Q3US96 136 aa12.05□□□□□ -0.48
Phtf1-201ENSMUST00000055425 4930432M17RikQ3V0W9 174 aa12.05□□□□□ -0.48
Phtf1-201ENSMUST00000055425 Klk1b4P00757 256 aa12.05□□□□□ -0.48
Phtf1-201ENSMUST00000055425 P01823 113 aa12.05□□□□□ -0.48
Phtf1-201ENSMUST00000055425 Ang3P97802 145 aa12.05□□□□□ -0.48
Phtf1-201ENSMUST00000055425 Gm9922Q8C3P1 144 aa12.05□□□□□ -0.48
Phtf1-201ENSMUST00000055425 RetnQ99P87 114 aa12.05□□□□□ -0.48
Phtf1-201ENSMUST00000055425 Phpt1Q9DAK9 124 aa12.05□□□□□ -0.48
Phtf1-201ENSMUST00000055425 Gm904Q3V2L5 102 aa12.04□□□□□ -0.48
Phtf1-201ENSMUST00000055425 Trbv30A0A0B4J1P1 111 aa12.04□□□□□ -0.48
Phtf1-201ENSMUST00000055425 Morn3Q8C5T4 241 aa12.04□□□□□ -0.48
Phtf1-201ENSMUST00000055425 P01786 117 aa12.03□□□□□ -0.48
Phtf1-201ENSMUST00000055425 Gm815Q3UWS2 115 aa12.03□□□□□ -0.48
Phtf1-201ENSMUST00000055425 Fam110dQ80X91 271 aa12.03□□□□□ -0.48
Phtf1-201ENSMUST00000055425 Atp5eP56382 52 aa12.02□□□□□ -0.48
Phtf1-201ENSMUST00000055425 Srsf12Q8C8K3 266 aa12.02□□□□□ -0.48
Phtf1-201ENSMUST00000055425 NbasE9Q411 2356 aa12.02□□□□□ -0.48
Phtf1-201ENSMUST00000055425 Helz2E9QAM5 2947 aaKnown RBP12.02□□□□□ -0.49
Phtf1-201ENSMUST00000055425 Ucn2Q99ML8 113 aa12.02□□□□□ -0.49
Phtf1-201ENSMUST00000055425 Atp5g1Q9CR84 136 aa12.02□□□□□ -0.49
Phtf1-201ENSMUST00000055425 P01738 130 aa12.02□□□□□ -0.49
Phtf1-201ENSMUST00000055425 Prp2P05143 317 aa12.01□□□□□ -0.49
Phtf1-201ENSMUST00000055425 CirbpP60824 172 aaKnown RBP12.01□□□□□ -0.49
Phtf1-201ENSMUST00000055425 CdsnQ7TPC1 561 aa12.01□□□□□ -0.49
Phtf1-201ENSMUST00000055425 Ptpn13Q64512 2453 aa12.01□□□□□ -0.49
Phtf1-201ENSMUST00000055425 ColqO35348 457 aa12.01□□□□□ -0.49
Phtf1-201ENSMUST00000055425 TeppQ6IMH0 216 aa12.01□□□□□ -0.49
Phtf1-201ENSMUST00000055425 Shisa2Q8QZV2 295 aa12□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 7.3 ms