RNA–Protein interactions for RNA: ENSMUST00000045312.5

Smc1a-201, Transcript of Structural maintenance of chromosomes protein 1A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smc1a, Length 4,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1a-201ENSMUST00000045312 Cox17P56394 63 aa5.36□□□□□ -1.55
Smc1a-201ENSMUST00000045312 Leap2Q91V13 76 aa5.36□□□□□ -1.55
Smc1a-201ENSMUST00000045312 Flg2Q2VIS4 2362 aa5.36□□□□□ -1.55
Smc1a-201ENSMUST00000045312 Abca2P41234 2434 aa5.36□□□□□ -1.55
Smc1a-201ENSMUST00000045312 Gm10553J3QPF1 123 aa5.36□□□□□ -1.55
Smc1a-201ENSMUST00000045312 Ube2d3P61079 147 aa5.36□□□□□ -1.55
Smc1a-201ENSMUST00000045312 Ube2d2P62838 147 aa5.36□□□□□ -1.55
Smc1a-201ENSMUST00000045312 Odf1Q61999 247 aa5.36□□□□□ -1.55
Smc1a-201ENSMUST00000045312 5730596B20RikQ8BQ08 205 aa5.36□□□□□ -1.55
Smc1a-201ENSMUST00000045312 Gm12689Q8BQU9 117 aa5.36□□□□□ -1.55
Smc1a-201ENSMUST00000045312 Ighv1-4A0A075B5T4 117 aa5.35□□□□□ -1.55
Smc1a-201ENSMUST00000045312 Trbv16A0A0B4J1H3 115 aa5.35□□□□□ -1.55
Smc1a-201ENSMUST00000045312 P06328 117 aa5.35□□□□□ -1.55
Smc1a-201ENSMUST00000045312 Trav13-4-dv7A0A075B6C2 110 aa5.35□□□□□ -1.55
Smc1a-201ENSMUST00000045312 Trav13d-4A0A0G2JFX3 110 aa5.35□□□□□ -1.55
Smc1a-201ENSMUST00000045312 Igkv3-2A0A075B5P0 119 aa5.35□□□□□ -1.55
Smc1a-201ENSMUST00000045312 Rpl39lQ9CQD0 51 aa5.35□□□□□ -1.55
Smc1a-201ENSMUST00000045312 CstadQ9D245 104 aa5.35□□□□□ -1.55
Smc1a-201ENSMUST00000045312 Wdr90Q6ZPG2 1874 aa5.35□□□□□ -1.55
Smc1a-201ENSMUST00000045312 Gm10518F6UQQ9 182 aa5.35□□□□□ -1.55
Smc1a-201ENSMUST00000045312 NpwA0A1L1STR8 176 aa5.34□□□□□ -1.55
Smc1a-201ENSMUST00000045312 Nsun4C4P6S0 806 aaKnown RBP5.34□□□□□ -1.55
Smc1a-201ENSMUST00000045312 Gm37988J3QM41 62 aa5.34□□□□□ -1.55
Smc1a-201ENSMUST00000045312 Trav9-2A0A075B647 113 aa5.34□□□□□ -1.55
Smc1a-201ENSMUST00000045312 Ighv5-9-1A0A0A6YVS4 126 aa5.34□□□□□ -1.55
Smc1a-201ENSMUST00000045312 Trav9-4A0A0B4J1K2 113 aa5.34□□□□□ -1.55
Smc1a-201ENSMUST00000045312 P01748 117 aa5.34□□□□□ -1.55
Smc1a-201ENSMUST00000045312 Ndufc1Q9CQY9 76 aa5.34□□□□□ -1.55
Smc1a-201ENSMUST00000045312 Ighv1-11A0A0A6YWI9 117 aa5.34□□□□□ -1.56
Smc1a-201ENSMUST00000045312 P01747 120 aa5.34□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Gm21748Q3UE70 102 aa5.34□□□□□ -1.56
Smc1a-201ENSMUST00000045312 CdsnQ7TPC1 561 aa5.34□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Rnf152Q8BG47 203 aa5.34□□□□□ -1.56
Smc1a-201ENSMUST00000045312 A830031A19RikQ8BNT5 113 aa5.34□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Gm10135F6TEE5 83 aa5.33□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Apoc4Q61268 124 aa5.33□□□□□ -1.56
Smc1a-201ENSMUST00000045312 A130051J06RikQ8CAU1 227 aa5.33□□□□□ -1.56
Smc1a-201ENSMUST00000045312 1520401A03RikA0A0J9YVH6 598 aa5.33□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Cmc4Q61908 68 aa5.33□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Igkv3-9A0A140T8P4 119 aa5.33□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Cox6b1P56391 86 aaKnown RBP5.33□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Nop10Q9CQS2 64 aa5.33□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Erdr1J3QMM0 206 aa5.32□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Sox16Q62247 57 aa5.32□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Gm5878E9PUB3 99 aa5.32□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Cox7a1P56392 80 aa5.32□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Fxyd5P97808 178 aa5.32□□□□□ -1.56
Smc1a-201ENSMUST00000045312 SptssbQ925E8 76 aa5.32□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Crip2Q9DCT8 208 aaKnown RBP5.32□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Ighv12-3A0A075B5T1 117 aa5.32□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Prr15lQ8JZM2 100 aa5.32□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Prr13Q9CQJ5 137 aa5.32□□□□□ -1.56
Smc1a-201ENSMUST00000045312 DscamQ9ERC8 2013 aa5.31□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Ighv1-53A0A075B5W3 117 aa5.31□□□□□ -1.56
Smc1a-201ENSMUST00000045312 TshbP12656 138 aa5.31□□□□□ -1.56
Smc1a-201ENSMUST00000045312 P84751 237 aa5.31□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Ndufs5Q99LY9 106 aa5.31□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Ebi3O35228 228 aa5.31□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Gm9958Q8C9U4 106 aa5.31□□□□□ -1.56
Smc1a-201ENSMUST00000045312 SnurfQ9WU12 71 aa5.31□□□□□ -1.56
Smc1a-201ENSMUST00000045312 BlcapP62951 87 aa5.31□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Map6d1Q14BB9 191 aa5.3□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Crlf1Q9JM58 425 aa5.3□□□□□ -1.56
Smc1a-201ENSMUST00000045312 E030018B13RikJ3QMS9 113 aa5.3□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Fhl1P97447 280 aaKnown RBP5.3□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Tln1P26039 2541 aaKnown RBP5.3□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Igkv1-88A0A140T8N1 120 aa5.3□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Klk9Q32M27 251 aa5.3□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Ighv1-82A0A0G2JEU7 117 aa5.29□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Defb26Q30KN7 186 aa5.29□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Dkk4Q8VEJ3 221 aa5.29□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Serp1Q9Z1W5 66 aa5.29□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Adamts20P59511 1906 aa5.29□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Ighv1-61P01749 117 aa5.29□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Pla2g2aP31482 146 aa5.29□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Mapk1ip1lQ8BH93 242 aa5.29□□□□□ -1.56
Smc1a-201ENSMUST00000045312 PtprbB2RU80 1998 aa5.29□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Ighv13-2A0A0A6YWN3 119 aa5.29□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Ube2d4D3YUH6 135 aa5.29□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Pde6gP09174 87 aa5.29□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Ighv1-85A0A075B5Y6 117 aa5.29□□□□□ -1.56
Smc1a-201ENSMUST00000045312 P01823 113 aa5.29□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Pip4p1Q3TWL2 284 aa5.29□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Prop1P97458 223 aa5.28□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Trbv13-2A0A140T8N6 113 aa5.28□□□□□ -1.56
Smc1a-201ENSMUST00000045312 1810032O08RikE9PZV8 113 aa5.28□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Ankhd1E9PUR0 2548 aaKnown RBP5.28□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Ighv2-7A0A075B5Q8 116 aa5.28□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Ighv1-75A0A075B5Y2 117 aa5.28□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Defb18Q30KP5 85 aa5.28□□□□□ -1.56
Smc1a-201ENSMUST00000045312 Rtl10D3YWW5 146 aa5.27□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Ighv1-72P01751 139 aa5.27□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Sec61gP60060 68 aa5.27□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Polr2kQ63871 58 aa5.27□□□□□ -1.57
Smc1a-201ENSMUST00000045312 ScxQ64124 207 aa5.27□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Hcfc1Q61191 2045 aaKnown RBP5.27□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Tmem223Q9CQE2 199 aaKnown RBP5.27□□□□□ -1.57
Smc1a-201ENSMUST00000045312 TeppQ6IMH0 216 aa5.27□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Ttc28Q80XJ3 2450 aa5.27□□□□□ -1.57
Smc1a-201ENSMUST00000045312 Ccl21aP84444 133 aa5.27□□□□□ -1.57
Retrieved 100 of 22,080 RNA–protein pairs in 62.2 ms