RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Tcte2E9PY37 120 aa6.15□□□□□ -1.42
Cdc40-201ENSMUST00000044166 Ccl19O70460 108 aa6.15□□□□□ -1.42
Cdc40-201ENSMUST00000044166 P01747 120 aa6.15□□□□□ -1.42
Cdc40-201ENSMUST00000044166 Hist1h4aP62806 103 aaKnown RBP6.15□□□□□ -1.42
Cdc40-201ENSMUST00000044166 Fam19a1Q7TPG8 133 aa6.15□□□□□ -1.42
Cdc40-201ENSMUST00000044166 Lyzl4Q9D925 145 aa6.15□□□□□ -1.42
Cdc40-201ENSMUST00000044166 Ighv1-66A0A075B5X5 117 aa6.15□□□□□ -1.43
Cdc40-201ENSMUST00000044166 GhrhP16043 103 aa6.15□□□□□ -1.43
Cdc40-201ENSMUST00000044166 FshbQ60687 130 aa6.15□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Morn5Q9DAI9 170 aa6.15□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Phlda3Q9WV95 125 aa6.15□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Timm17aQ9Z0V8 171 aa6.15□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Chd8Q09XV5 2582 aaKnown RBP6.15□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Rbm3O89086 153 aaKnown RBP6.15□□□□□ -1.43
Cdc40-201ENSMUST00000044166 OxtP35454 125 aa6.15□□□□□ -1.43
Cdc40-201ENSMUST00000044166 4930556J24RikQ9D4U7 146 aa6.15□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Crlf1Q9JM58 425 aa6.15□□□□□ -1.43
Cdc40-201ENSMUST00000044166 P06328 117 aa6.14□□□□□ -1.43
Cdc40-201ENSMUST00000044166 A530084C06RikQ3UTW2 186 aa6.14□□□□□ -1.43
Cdc40-201ENSMUST00000044166 SpinklQ8CEK3 90 aa6.14□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Higd1aQ9JLR9 95 aa6.14□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Abca4O35600 2310 aa6.14□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Hoxd3P09027 433 aa6.14□□□□□ -1.43
Cdc40-201ENSMUST00000044166 1500011B03RikQ3TTH7 73 aa6.14□□□□□ -1.43
Cdc40-201ENSMUST00000044166 A830031A19RikQ8BNT5 113 aa6.14□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Smim26Q3V460 107 aa6.13□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Taf15Q8BQ46 557 aaKnown RBP6.13□□□□□ -1.43
Cdc40-201ENSMUST00000044166 SonQ9QX47 2444 aaKnown RBP6.13□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Gm17732E9Q5I2 61 aa6.13□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Gm9970F6ZED4 185 aa6.13□□□□□ -1.43
Cdc40-201ENSMUST00000044166 P01750 117 aa6.13□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Edn3P48299 214 aa6.13□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Gphb5Q812B2 130 aa6.13□□□□□ -1.43
Cdc40-201ENSMUST00000044166 LeprotO89013 131 aa6.13□□□□□ -1.43
Cdc40-201ENSMUST00000044166 CdsnQ7TPC1 561 aa6.13□□□□□ -1.43
Cdc40-201ENSMUST00000044166 AI854703Q8BIN3 203 aa6.13□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Pgpep1lQ9CWB5 130 aa6.13□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Ighv3-8A0A075B5T0 131 aa6.12□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Ighv1-5A0A0A6YWG2 117 aa6.12□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Hbb-b2P02089 147 aa6.12□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Snrpd3P62320 126 aaKnown RBP6.12□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Serp2Q6TAW2 65 aa6.12□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Pfn2Q9JJV2 140 aa6.12□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Timm17bQ9Z0V7 172 aa6.12□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Mob4Q6PEB6 225 aa6.12□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Mpv17l2Q8VIK2 200 aa6.12□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Zfyve26Q5DU37 2529 aa6.12□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Ighv8-11A0A075B5X4 119 aa6.12□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Gm20499D3Z4G5 72 aa6.12□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Lect2O88803 151 aa6.12□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Ins2P01326 110 aa6.12□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Cox6cQ9CPQ1 76 aa6.12□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Trbv16A0A0B4J1H3 115 aa6.11□□□□□ -1.43
Cdc40-201ENSMUST00000044166 LhbO09108 141 aa6.11□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Gm5153P01627 120 aa6.11□□□□□ -1.43
Cdc40-201ENSMUST00000044166 P01643 108 aa6.11□□□□□ -1.43
Cdc40-201ENSMUST00000044166 FcorP0DJI6 106 aa6.11□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Prr3Q811B5 190 aaKnown RBP6.11□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Mrpl35Q9CQL6 188 aa6.11□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Ighv1-50A0A075B5W1 117 aa6.11□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Ighv1-64A0A075B5X3 117 aa6.11□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Rpl18aP62717 176 aaKnown RBP6.11□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Ndufb4Q9CQC7 129 aa6.11□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Cd164l2Q9D6W7 172 aa6.11□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Tmem263Q9DAM7 115 aa6.11□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Fam216aQ9DB54 251 aa6.11□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Pou2af1Q64693 256 aa6.1□□□□□ -1.43
Cdc40-201ENSMUST00000044166 BikO70337 150 aa6.1□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Gm9936Q8C864 160 aa6.1□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Ighv1-85A0A075B5Y6 117 aa6.09□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Gm15557A6PWY0 234 aa6.09□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Pglyrp1O88593 182 aa6.09□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Gm21748Q3UE70 102 aa6.09□□□□□ -1.43
Cdc40-201ENSMUST00000044166 P01820 115 aa6.09□□□□□ -1.43
Cdc40-201ENSMUST00000044166 P84751 237 aa6.09□□□□□ -1.43
Cdc40-201ENSMUST00000044166 MplkipQ9D011 178 aa6.09□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Cd164Q9R0L9 197 aa6.09□□□□□ -1.43
Cdc40-201ENSMUST00000044166 Igkv4-69A0A0B4J1I6 116 aa6.08□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Prr9Q8BV84 116 aa6.08□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Cystm1Q8K353 104 aa6.08□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Atp5g1Q9CR84 136 aa6.08□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Dmbt1Q60997 2085 aa6.08□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Gm3285A0A1W2P7U0 201 aa6.08□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Gm10300Q8C8P7 189 aa6.08□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Spata25Q9DA57 226 aa6.08□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Fam208bQ5DTT3 2382 aa6.08□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Trav14-1A0A0G2JF94 121 aa6.08□□□□□ -1.44
Cdc40-201ENSMUST00000044166 P01753 117 aa6.08□□□□□ -1.44
Cdc40-201ENSMUST00000044166 A530064D06RikQ8BNV8 229 aa6.08□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Ighv5-8A0A075B676 92 aa6.07□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Ighv1-12A0A0A6YXJ9 117 aa6.07□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Igkv6-13A0A0G2JGY3 119 aa6.07□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Lmo4P61969 165 aa6.07□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Pet100P0DJE0 76 aa6.07□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Fam19a4Q7TPG5 135 aa6.07□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Ifitm1Q9D103 106 aa6.07□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Gm10521E9PZK0 135 aa6.07□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Cspg4Q8VHY0 2327 aa6.07□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Spg11Q3UHA3 2430 aa6.06□□□□□ -1.44
Cdc40-201ENSMUST00000044166 Tm2d2Q8R0I4 213 aa6.06□□□□□ -1.44
Retrieved 100 of 22,080 RNA–protein pairs in 52.6 ms