RNA–Protein interactions for RNA: ENSMUST00000029480.8

Prpf38b-201, Transcript of Pre-mRNA-splicing factor 38B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf38b, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38b-201ENSMUST00000029480 Fgfbp3Q1HCM0 245 aa9.87□□□□□ -0.83
Prpf38b-201ENSMUST00000029480 Defb45Q3V490 66 aa9.87□□□□□ -0.83
Prpf38b-201ENSMUST00000029480 Q4KKZ1 196 aa9.87□□□□□ -0.83
Prpf38b-201ENSMUST00000029480 Il1f10Q8R459 152 aa9.87□□□□□ -0.83
Prpf38b-201ENSMUST00000029480 4930442H23RikQ9D5G7 103 aa9.86□□□□□ -0.83
Prpf38b-201ENSMUST00000029480 Myo9aQ8C170 2542 aa9.86□□□□□ -0.83
Prpf38b-201ENSMUST00000029480 Ighv2-6-8A0A0A6YWY9 116 aa9.85□□□□□ -0.83
Prpf38b-201ENSMUST00000029480 Cela2aP05208 271 aa9.85□□□□□ -0.83
Prpf38b-201ENSMUST00000029480 P18527 97 aa9.85□□□□□ -0.83
Prpf38b-201ENSMUST00000029480 PemtQ61907 199 aa9.85□□□□□ -0.83
Prpf38b-201ENSMUST00000029480 Dido1Q8C9B9 2256 aaKnown RBP9.85□□□□□ -0.83
Prpf38b-201ENSMUST00000029480 Snrpd3P62320 126 aaKnown RBP9.85□□□□□ -0.83
Prpf38b-201ENSMUST00000029480 Mrpl36Q99N90 102 aa9.85□□□□□ -0.83
Prpf38b-201ENSMUST00000029480 Arhgap32Q811P8 2089 aa9.85□□□□□ -0.83
Prpf38b-201ENSMUST00000029480 Ighv1-12A0A0A6YXJ9 117 aa9.85□□□□□ -0.83
Prpf38b-201ENSMUST00000029480 C1qcQ02105 246 aa9.85□□□□□ -0.83
Prpf38b-201ENSMUST00000029480 Gm16223Q8CBM3 117 aa9.85□□□□□ -0.83
Prpf38b-201ENSMUST00000029480 Col7a1Q63870 2944 aa9.85□□□□□ -0.83
Prpf38b-201ENSMUST00000029480 Ighv1-61P01749 117 aa9.84□□□□□ -0.83
Prpf38b-201ENSMUST00000029480 Gm9961Q8BNV2 113 aa9.84□□□□□ -0.83
Prpf38b-201ENSMUST00000029480 P01643 108 aa9.84□□□□□ -0.83
Prpf38b-201ENSMUST00000029480 Csn3P06796 181 aa9.84□□□□□ -0.83
Prpf38b-201ENSMUST00000029480 Ube2d1P61080 147 aaKnown RBP9.84□□□□□ -0.83
Prpf38b-201ENSMUST00000029480 Gphb5Q812B2 130 aa9.84□□□□□ -0.83
Prpf38b-201ENSMUST00000029480 PmvkQ9D1G2 192 aa9.84□□□□□ -0.83
Prpf38b-201ENSMUST00000029480 Lyzl4Q9D925 145 aa9.84□□□□□ -0.83
Prpf38b-201ENSMUST00000029480 Gm10322F7D7I4 111 aa9.83□□□□□ -0.84
Prpf38b-201ENSMUST00000029480 CrygfQ9CXV3 174 aa9.83□□□□□ -0.84
Prpf38b-201ENSMUST00000029480 Ighv1-58A0A075B5W9 117 aa9.83□□□□□ -0.84
Prpf38b-201ENSMUST00000029480 Ang5Q5GAN1 145 aa9.83□□□□□ -0.84
Prpf38b-201ENSMUST00000029480 Brk1Q91VR8 75 aa9.83□□□□□ -0.84
Prpf38b-201ENSMUST00000029480 Ighv13-2A0A0A6YWN3 119 aa9.82□□□□□ -0.84
Prpf38b-201ENSMUST00000029480 Trav4d-3A0A075B625 110 aa9.82□□□□□ -0.84
Prpf38b-201ENSMUST00000029480 Trav4-3A0A0B4J1K1 110 aa9.82□□□□□ -0.84
Prpf38b-201ENSMUST00000029480 P06328 117 aa9.82□□□□□ -0.84
Prpf38b-201ENSMUST00000029480 S100a4P07091 101 aa9.82□□□□□ -0.84
Prpf38b-201ENSMUST00000029480 Cfap126Q6P8X9 189 aa9.82□□□□□ -0.84
Prpf38b-201ENSMUST00000029480 Atp5lQ9CPQ8 103 aa9.82□□□□□ -0.84
Prpf38b-201ENSMUST00000029480 Ighv1-72P01751 139 aa9.82□□□□□ -0.84
Prpf38b-201ENSMUST00000029480 PlaurP35456 327 aa9.82□□□□□ -0.84
Prpf38b-201ENSMUST00000029480 Gm9922Q8C3P1 144 aa9.82□□□□□ -0.84
Prpf38b-201ENSMUST00000029480 Foxi1Q922I5 372 aa9.82□□□□□ -0.84
Prpf38b-201ENSMUST00000029480 Tac4Q99N14 128 aa9.82□□□□□ -0.84
Prpf38b-201ENSMUST00000029480 Gkn1Q9CR36 201 aa9.82□□□□□ -0.84
Prpf38b-201ENSMUST00000029480 Gm17732E9Q5I2 61 aa9.81□□□□□ -0.84
Prpf38b-201ENSMUST00000029480 H1fxQ80ZM5 188 aa9.81□□□□□ -0.84
Prpf38b-201ENSMUST00000029480 Ss18Q62280 418 aa9.81□□□□□ -0.84
Prpf38b-201ENSMUST00000029480 Ube2wQ8VDW4 151 aa9.81□□□□□ -0.84
Prpf38b-201ENSMUST00000029480 TtrP07309 147 aa9.8□□□□□ -0.84
Prpf38b-201ENSMUST00000029480 Cox7a1P56392 80 aa9.8□□□□□ -0.84
Prpf38b-201ENSMUST00000029480 Dph3Q8K0W9 82 aa9.8□□□□□ -0.84
Prpf38b-201ENSMUST00000029480 Sorl1O88307 2215 aaKnown RBP9.8□□□□□ -0.84
Prpf38b-201ENSMUST00000029480 Gm11020F6ZGD5 61 aa9.8□□□□□ -0.84
Prpf38b-201ENSMUST00000029480 7530416G11RikJ3QJX6 159 aa9.8□□□□□ -0.84
Prpf38b-201ENSMUST00000029480 Rpl11Q9CXW4 178 aaKnown RBP9.8□□□□□ -0.84
Prpf38b-201ENSMUST00000029480 Akap6E9Q9K8 2307 aa9.79□□□□□ -0.84
Prpf38b-201ENSMUST00000029480 Tmem170bP86050 132 aa9.79□□□□□ -0.84
Prpf38b-201ENSMUST00000029480 9430069I07RikQ9CX21 111 aa9.79□□□□□ -0.84
Prpf38b-201ENSMUST00000029480 Fam240aJ3QNP9 97 aa9.79□□□□□ -0.84
Prpf38b-201ENSMUST00000029480 LhbO09108 141 aa9.79□□□□□ -0.84
Prpf38b-201ENSMUST00000029480 Gm10300Q8C8P7 189 aa9.79□□□□□ -0.84
Prpf38b-201ENSMUST00000029480 Q9D8Q6 235 aa9.79□□□□□ -0.84
Prpf38b-201ENSMUST00000029480 Usp9xP70398 2559 aaKnown RBP9.79□□□□□ -0.84
Prpf38b-201ENSMUST00000029480 Brd3osA0A1B0GRB6 84 aa9.78□□□□□ -0.84
Prpf38b-201ENSMUST00000029480 Defa20Q45VN2 95 aa9.78□□□□□ -0.84
Prpf38b-201ENSMUST00000029480 Prr3Q811B5 190 aaKnown RBP9.78□□□□□ -0.84
Prpf38b-201ENSMUST00000029480 Fxyd5P97808 178 aa9.78□□□□□ -0.84
Prpf38b-201ENSMUST00000029480 HilpdaQ9JLS0 64 aa9.77□□□□□ -0.84
Prpf38b-201ENSMUST00000029480 Ighv2-3A0A075B696 115 aa9.77□□□□□ -0.85
Prpf38b-201ENSMUST00000029480 Igkv4-74A0A0B4J1I3 119 aa9.77□□□□□ -0.85
Prpf38b-201ENSMUST00000029480 Igkv4-68A0A0B4J1I7 117 aa9.77□□□□□ -0.85
Prpf38b-201ENSMUST00000029480 Trbv13-1A0A0B4J1P8 112 aa9.77□□□□□ -0.85
Prpf38b-201ENSMUST00000029480 Dmrt3Q80WT2 476 aa9.77□□□□□ -0.85
Prpf38b-201ENSMUST00000029480 Gm4861Q8C5A4 106 aa9.77□□□□□ -0.85
Prpf38b-201ENSMUST00000029480 Gm17472A0A075B683 117 aa9.76□□□□□ -0.85
Prpf38b-201ENSMUST00000029480 Spata25Q9DA57 226 aa9.76□□□□□ -0.85
Prpf38b-201ENSMUST00000029480 Ankhd1E9PUR0 2548 aaKnown RBP9.76□□□□□ -0.85
Prpf38b-201ENSMUST00000029480 Ighv3-8A0A075B5T0 131 aa9.76□□□□□ -0.85
Prpf38b-201ENSMUST00000029480 Gm11011D3Z3L9 86 aa9.76□□□□□ -0.85
Prpf38b-201ENSMUST00000029480 MifP34884 115 aaKnown RBP9.76□□□□□ -0.85
Prpf38b-201ENSMUST00000029480 Gm10509O88255 85 aa9.75□□□□□ -0.85
Prpf38b-201ENSMUST00000029480 OxtP35454 125 aa9.75□□□□□ -0.85
Prpf38b-201ENSMUST00000029480 Trav7d-3Q5R1I1 112 aa9.75□□□□□ -0.85
Prpf38b-201ENSMUST00000029480 AI854703Q8BIN3 203 aa9.75□□□□□ -0.85
Prpf38b-201ENSMUST00000029480 Defa21Q8C1P2 93 aa9.75□□□□□ -0.85
Prpf38b-201ENSMUST00000029480 Crip2Q9DCT8 208 aaKnown RBP9.75□□□□□ -0.85
Prpf38b-201ENSMUST00000029480 Celsr2Q9R0M0 2920 aa9.75□□□□□ -0.85
Prpf38b-201ENSMUST00000029480 B230217C12RikE9Q3Z1 139 aa9.75□□□□□ -0.85
Prpf38b-201ENSMUST00000029480 Gm10135F6TEE5 83 aa9.75□□□□□ -0.85
Prpf38b-201ENSMUST00000029480 Gemin7Q9CWY4 129 aa9.75□□□□□ -0.85
Prpf38b-201ENSMUST00000029480 OtogO55225 2910 aa9.75□□□□□ -0.85
Prpf38b-201ENSMUST00000029480 Gm44965A0A0N4SVR3 59 aa9.74□□□□□ -0.85
Prpf38b-201ENSMUST00000029480 Gm11444F6QMA6 170 aa9.74□□□□□ -0.85
Prpf38b-201ENSMUST00000029480 A930009A15RikG3UYI6 118 aa9.74□□□□□ -0.85
Prpf38b-201ENSMUST00000029480 Hist1h4aP62806 103 aaKnown RBP9.74□□□□□ -0.85
Prpf38b-201ENSMUST00000029480 Esm1Q9QYY7 184 aa9.74□□□□□ -0.85
Prpf38b-201ENSMUST00000029480 Mrps12O35680 139 aa9.74□□□□□ -0.85
Prpf38b-201ENSMUST00000029480 Egr2P08152 470 aa9.74□□□□□ -0.85
Prpf38b-201ENSMUST00000029480 Unc79Q0KK59 2596 aa9.74□□□□□ -0.85
Prpf38b-201ENSMUST00000029480 LrbaQ9ESE1 2856 aa9.74□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 100.2 ms