RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Fgf23Q9EPC2 251 aa13.34□□□□□ -0.27
Ccdc3-201ENSMUST00000027988 Rmi2Q3UPE3 149 aa13.33□□□□□ -0.28
Ccdc3-201ENSMUST00000027988 Tcrg-C1A0A075B5Z0 172 aa13.33□□□□□ -0.28
Ccdc3-201ENSMUST00000027988 Gm9887F6RFI0 207 aa13.33□□□□□ -0.28
Ccdc3-201ENSMUST00000027988 Tac4Q99N14 128 aa13.33□□□□□ -0.28
Ccdc3-201ENSMUST00000027988 Ankrd11E9Q4F7 2643 aa13.32□□□□□ -0.28
Ccdc3-201ENSMUST00000027988 Gm933J3QPC1 141 aa13.32□□□□□ -0.28
Ccdc3-201ENSMUST00000027988 Rbmy1bQ60990 380 aa13.32□□□□□ -0.28
Ccdc3-201ENSMUST00000027988 Tenm3Q9WTS6 2715 aa13.32□□□□□ -0.28
Ccdc3-201ENSMUST00000027988 Ccl21aP84444 133 aa13.32□□□□□ -0.28
Ccdc3-201ENSMUST00000027988 Ccl21bP86792 133 aa13.32□□□□□ -0.28
Ccdc3-201ENSMUST00000027988 Ccl21cP86793 133 aa13.32□□□□□ -0.28
Ccdc3-201ENSMUST00000027988 Trav3-1Q5R1I8 114 aa13.32□□□□□ -0.28
Ccdc3-201ENSMUST00000027988 Hspg2Q05793 3707 aaKnown RBP13.31□□□□□ -0.28
Ccdc3-201ENSMUST00000027988 Ank2Q8C8R3 3898 aa13.31□□□□□ -0.28
Ccdc3-201ENSMUST00000027988 Igkv4-78A0A0A6YYE5 119 aa13.31□□□□□ -0.28
Ccdc3-201ENSMUST00000027988 BC048562Q80ZQ7 204 aa13.31□□□□□ -0.28
Ccdc3-201ENSMUST00000027988 Klhdc1Q80YG3 406 aa13.31□□□□□ -0.28
Ccdc3-201ENSMUST00000027988 Gm3443F7CCV5 94 aa13.3□□□□□ -0.28
Ccdc3-201ENSMUST00000027988 Rif1Q6PR54 2419 aaKnown RBP13.3□□□□□ -0.28
Ccdc3-201ENSMUST00000027988 Ighv2-6-8A0A0A6YWY9 116 aa13.29□□□□□ -0.28
Ccdc3-201ENSMUST00000027988 Ly6gP35461 111 aa13.29□□□□□ -0.28
Ccdc3-201ENSMUST00000027988 Cryba4Q9JJV0 196 aa13.29□□□□□ -0.28
Ccdc3-201ENSMUST00000027988 Gm815Q3UWS2 115 aa13.29□□□□□ -0.28
Ccdc3-201ENSMUST00000027988 Fam110dQ80X91 271 aa13.29□□□□□ -0.28
Ccdc3-201ENSMUST00000027988 Atp5lQ9CPQ8 103 aa13.29□□□□□ -0.28
Ccdc3-201ENSMUST00000027988 Ankrd17Q99NH0 2603 aaKnown RBP13.29□□□□□ -0.28
Ccdc3-201ENSMUST00000027988 FlnaQ8BTM8 2647 aaKnown RBP13.28□□□□□ -0.28
Ccdc3-201ENSMUST00000027988 Ifitm1Q9D103 106 aa13.28□□□□□ -0.28
Ccdc3-201ENSMUST00000027988 Igkv4-91A0A075B5L2 119 aa13.28□□□□□ -0.28
Ccdc3-201ENSMUST00000027988 Ly86O88188 162 aa13.27□□□□□ -0.28
Ccdc3-201ENSMUST00000027988 Ighv1-72P01751 139 aa13.27□□□□□ -0.28
Ccdc3-201ENSMUST00000027988 GalmQ8K157 342 aa13.27□□□□□ -0.28
Ccdc3-201ENSMUST00000027988 Atp6v0e2Q91XE7 81 aa13.27□□□□□ -0.28
Ccdc3-201ENSMUST00000027988 Trbv30A0A0B4J1P1 111 aa13.27□□□□□ -0.29
Ccdc3-201ENSMUST00000027988 Gm11444F6QMA6 170 aa13.27□□□□□ -0.29
Ccdc3-201ENSMUST00000027988 P01786 117 aa13.27□□□□□ -0.29
Ccdc3-201ENSMUST00000027988 Gm5089A1L3C8 106 aa13.26□□□□□ -0.29
Ccdc3-201ENSMUST00000027988 Rpl13aP19253 203 aaKnown RBP13.26□□□□□ -0.29
Ccdc3-201ENSMUST00000027988 Gm9747Q810H1 104 aa13.26□□□□□ -0.29
Ccdc3-201ENSMUST00000027988 Wnk1P83741 2377 aa13.26□□□□□ -0.29
Ccdc3-201ENSMUST00000027988 Trdv5A0A075B661 115 aa13.26□□□□□ -0.29
Ccdc3-201ENSMUST00000027988 Gm8439G3UWA7 96 aa13.26□□□□□ -0.29
Ccdc3-201ENSMUST00000027988 Q9DAQ5 155 aa13.26□□□□□ -0.29
Ccdc3-201ENSMUST00000027988 Hivep2Q3UHF7 2430 aa13.25□□□□□ -0.29
Ccdc3-201ENSMUST00000027988 Cfc1P97766 202 aa13.25□□□□□ -0.29
Ccdc3-201ENSMUST00000027988 Mapk1ip1lQ8BH93 242 aa13.25□□□□□ -0.29
Ccdc3-201ENSMUST00000027988 Smim10l1A0A087WNQ7 89 aa13.25□□□□□ -0.29
Ccdc3-201ENSMUST00000027988 P01738 130 aa13.24□□□□□ -0.29
Ccdc3-201ENSMUST00000027988 Ifi27l2aQ8R412 90 aa13.24□□□□□ -0.29
Ccdc3-201ENSMUST00000027988 Phlda3Q9WV95 125 aa13.24□□□□□ -0.29
Ccdc3-201ENSMUST00000027988 Gm7849D3YX03 116 aa13.24□□□□□ -0.29
Ccdc3-201ENSMUST00000027988 ColqO35348 457 aa13.24□□□□□ -0.29
Ccdc3-201ENSMUST00000027988 Eif4ebp3Q80VV3 101 aa13.24□□□□□ -0.29
Ccdc3-201ENSMUST00000027988 P01896 185 aa13.23□□□□□ -0.29
Ccdc3-201ENSMUST00000027988 Gm4861Q8C5A4 106 aa13.23□□□□□ -0.29
Ccdc3-201ENSMUST00000027988 Gm10300Q8C8P7 189 aa13.23□□□□□ -0.29
Ccdc3-201ENSMUST00000027988 Spink10Q8CAC8 162 aa13.23□□□□□ -0.29
Ccdc3-201ENSMUST00000027988 Spata45Q9CVW4 97 aa13.23□□□□□ -0.29
Ccdc3-201ENSMUST00000027988 MtorQ9JLN9 2549 aa13.22□□□□□ -0.29
Ccdc3-201ENSMUST00000027988 Ighv1-11A0A0A6YWI9 117 aa13.22□□□□□ -0.29
Ccdc3-201ENSMUST00000027988 Rnf183Q8QZS5 190 aa13.22□□□□□ -0.29
Ccdc3-201ENSMUST00000027988 Rpl32-psP17932 135 aa13.22□□□□□ -0.29
Ccdc3-201ENSMUST00000027988 Fgfbp3Q1HCM0 245 aa13.22□□□□□ -0.29
Ccdc3-201ENSMUST00000027988 4930415O20RikQ8CDT5 131 aa13.22□□□□□ -0.29
Ccdc3-201ENSMUST00000027988 Gm10542F6XDR3 90 aa13.21□□□□□ -0.29
Ccdc3-201ENSMUST00000027988 PrlhG3UWC3 86 aa13.21□□□□□ -0.3
Ccdc3-201ENSMUST00000027988 Myo9aQ8C170 2542 aa13.21□□□□□ -0.3
Ccdc3-201ENSMUST00000027988 Gm11020F6ZGD5 61 aa13.2□□□□□ -0.3
Ccdc3-201ENSMUST00000027988 Trav7d-3Q5R1I1 112 aa13.2□□□□□ -0.3
Ccdc3-201ENSMUST00000027988 Gm10322F7D7I4 111 aa13.2□□□□□ -0.3
Ccdc3-201ENSMUST00000027988 Cox17P56394 63 aa13.2□□□□□ -0.3
Ccdc3-201ENSMUST00000027988 Lypd5Q9D7Z7 256 aa13.2□□□□□ -0.3
Ccdc3-201ENSMUST00000027988 Unc79Q0KK59 2596 aa13.2□□□□□ -0.3
Ccdc3-201ENSMUST00000027988 Rnase1P00683 149 aa13.19□□□□□ -0.3
Ccdc3-201ENSMUST00000027988 Atp5g3P56384 141 aa13.18□□□□□ -0.3
Ccdc3-201ENSMUST00000027988 Lgals4Q8K419 326 aa13.17□□□□□ -0.3
Ccdc3-201ENSMUST00000027988 Tmem101Q91VP7 257 aa13.17□□□□□ -0.3
Ccdc3-201ENSMUST00000027988 Prp2P05143 317 aa13.17□□□□□ -0.3
Ccdc3-201ENSMUST00000027988 Gm29423A0A087WRM1 55 aa13.16□□□□□ -0.3
Ccdc3-201ENSMUST00000027988 P01729 129 aa13.16□□□□□ -0.3
Ccdc3-201ENSMUST00000027988 Spink1P09036 80 aa13.16□□□□□ -0.3
Ccdc3-201ENSMUST00000027988 Usp9yF8VPU6 2556 aa13.16□□□□□ -0.3
Ccdc3-201ENSMUST00000027988 4930432M17RikQ3V0W9 174 aa13.16□□□□□ -0.3
Ccdc3-201ENSMUST00000027988 RetnQ99P87 114 aa13.16□□□□□ -0.3
Ccdc3-201ENSMUST00000027988 Trav13n-1A0A0G2JEU8 110 aa13.16□□□□□ -0.3
Ccdc3-201ENSMUST00000027988 Glrp1E9Q9S8 174 aa13.16□□□□□ -0.3
Ccdc3-201ENSMUST00000027988 Shisa2Q8QZV2 295 aa13.16□□□□□ -0.3
Ccdc3-201ENSMUST00000027988 Igkv4-79A0A075B5L8 119 aa13.15□□□□□ -0.3
Ccdc3-201ENSMUST00000027988 P01823 113 aa13.15□□□□□ -0.31
Ccdc3-201ENSMUST00000027988 Gatd1Q8BFQ8 220 aa13.14□□□□□ -0.31
Ccdc3-201ENSMUST00000027988 Cks1bP61025 79 aa13.14□□□□□ -0.31
Ccdc3-201ENSMUST00000027988 March3Q8BRX9 218 aa13.14□□□□□ -0.31
Ccdc3-201ENSMUST00000027988 Gm9936Q8C864 160 aa13.14□□□□□ -0.31
Ccdc3-201ENSMUST00000027988 Cep192E9Q4Y4 2514 aaKnown RBP13.13□□□□□ -0.31
Ccdc3-201ENSMUST00000027988 CenpwQ3URR0 86 aa13.13□□□□□ -0.31
Ccdc3-201ENSMUST00000027988 Trav7-6A0A075B640 112 aa13.12□□□□□ -0.31
Ccdc3-201ENSMUST00000027988 Q99M08 65 aa13.12□□□□□ -0.31
Ccdc3-201ENSMUST00000027988 Gm6793B2RXM2 351 aa13.12□□□□□ -0.31
Ccdc3-201ENSMUST00000027988 Srp14P16254 110 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 43.3 ms