RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Trav9n-2A0A0G2JDP3 113 aa6.28□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Gm1968Q3T9I3 115 aa6.28□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Sdk1Q3UH53 2193 aa6.28□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Tmem258P61166 79 aa6.28□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Gm5464Q3UY29 175 aa6.28□□□□□ -1.4
Sf3b1-201ENSMUST00000027127 Myo15bI7HPW8 3033 aa6.27□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 NbasE9Q411 2356 aa6.27□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Ighv2-6-8A0A0A6YWY9 116 aa6.27□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Igkv6-13A0A0G2JGY3 119 aa6.27□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 BikO70337 150 aa6.27□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Fam19a4Q7TPG5 135 aa6.27□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Gm16223Q8CBM3 117 aa6.27□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Iglc1A0A0G2JE99 106 aa6.27□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 P01843 105 aa6.27□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Col6a4A2AX52 2309 aa6.27□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Zfp292Q9Z2U2 2698 aa6.27□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Trav4d-3A0A075B625 110 aa6.26□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 BC107364E9Q5A2 140 aa6.26□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 P18527 97 aa6.26□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 1700012A03RikQ9DAF1 130 aa6.26□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Fam240bJ3QMB3 78 aa6.26□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Lect2O88803 151 aa6.26□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Gm9936Q8C864 160 aa6.26□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Igkv3-5A0A140T8M6 119 aa6.26□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Nop10Q9CQS2 64 aa6.26□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Gm7173A0A0G2JEB6 3132 aa6.26□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Gm26602M0QWA4 95 aa6.25□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 FcorP0DJI6 106 aa6.25□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Hcfc1Q61191 2045 aaKnown RBP6.25□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Ndufa12Q7TMF3 145 aaKnown RBP6.25□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Unc80Q8BLN6 3261 aa6.24□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Ighv1-5A0A0A6YWG2 117 aa6.24□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Gm10509O88255 85 aa6.24□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 BC048562Q80ZQ7 204 aa6.24□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 4930415O20RikQ8CDT5 131 aa6.24□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Smim1P0C8K7 78 aa6.24□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Gata1P17679 413 aa6.24□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 B9d2Q3UK10 175 aa6.24□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 BB014433Q8C5R5 389 aa6.24□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 OdaphJ3QNT8 126 aa6.24□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Defb2P82020 71 aa6.24□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Cfap126Q6P8X9 189 aa6.24□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Zfp951A0A087WRH0 451 aa6.24□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Atp5g3P56384 141 aa6.24□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Atp5g1Q9CR84 136 aa6.24□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Gm10490F6VBM2 120 aa6.23□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Chchd7Q8K2Q5 85 aa6.23□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Igkv1-122A0A140T8M9 119 aa6.23□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Rbm3O89086 153 aaKnown RBP6.23□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 P01745 121 aa6.23□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Mrpl35Q9CQL6 188 aa6.23□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Gm42674D3YUT9 64 aa6.23□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Ang3P97802 145 aa6.23□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 OtoglF7A4A7 2325 aa6.23□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Sigmar1O55242 223 aa6.23□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Tm2d2Q8R0I4 213 aa6.23□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Cox7a1P56392 80 aa6.22□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Smr3aQ61900 147 aa6.22□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Defb29Q8BGW9 78 aa6.22□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Ankhd1E9PUR0 2548 aaKnown RBP6.22□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Gm3443F7CCV5 94 aa6.22□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Gm10322F7D7I4 111 aa6.22□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Gm10251J3QPM5 127 aa6.22□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 BC025920Q3US60 128 aa6.22□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Gm2916Q9D9B9 127 aa6.22□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Ube2aQ9Z255 152 aa6.22□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Gm17472A0A075B683 117 aa6.22□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Igkv3-10A0A0G2JGN0 119 aa6.22□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 SptssbQ925E8 76 aa6.22□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 9430069I07RikQ9CX21 111 aa6.22□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Gm44965A0A0N4SVR3 59 aa6.21□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Rmi2Q3UPE3 149 aa6.21□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Atp6v0e2Q91XE7 81 aa6.21□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Plscr4P58196 326 aa6.21□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 BtcQ05928 177 aa6.21□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Wfdc15aQ8BH89 80 aa6.21□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Q9D8Q6 235 aa6.21□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Akap6E9Q9K8 2307 aa6.21□□□□□ -1.41
Sf3b1-201ENSMUST00000027127 Gm9922Q8C3P1 144 aa6.21□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 Cfap54Q8C6S9 3106 aa6.21□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 Gm12353A2AGJ4 60 aa6.21□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 SelenowP63300 88 aa6.21□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 Gm10735Q3US96 136 aa6.2□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 Cox7b2Q9D2H1 82 aa6.2□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 C920008G01RikA0A0B4J1N1 112 aa6.2□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 P06329 120 aa6.2□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 Trav9d-3A0A075B695 113 aa6.2□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 PrcdQ00LT2 53 aa6.2□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 Prp2P05143 317 aa6.19□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 P84751 237 aa6.19□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 Spink8Q09TK9 105 aa6.19□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 Triap1Q9D8Z2 76 aa6.19□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 Defb42Q8BVB5 75 aa6.19□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 Tmem243B2RVB9 118 aa6.19□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 B230217C12RikE9Q3Z1 139 aa6.19□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 Rnf152Q8BG47 203 aa6.19□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 Sec61gP60060 68 aa6.19□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 1700010B08RikQ9DAI7 102 aa6.19□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 Prune2Q52KR3 3084 aa6.18□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 P01729 129 aa6.18□□□□□ -1.42
Retrieved 100 of 22,080 RNA–protein pairs in 48.3 ms