RNA–Protein interactions for RNA: ENSMUST00000005532.8

Nid1-201, Transcript of Nidogen-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nid1, Length 6,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1-201ENSMUST00000005532 Znf239P24399 201 aa11.44□□□□□ -0.58
Nid1-201ENSMUST00000005532 Sptbn1Q62261 2363 aaKnown RBP11.44□□□□□ -0.58
Nid1-201ENSMUST00000005532 Tcl1b3P56842 122 aa11.44□□□□□ -0.58
Nid1-201ENSMUST00000005532 TncQ80YX1 2110 aa11.44□□□□□ -0.58
Nid1-201ENSMUST00000005532 1110002E22RikE0CYV9 1786 aa11.43□□□□□ -0.58
Nid1-201ENSMUST00000005532 2010109I03RikQ9CQ11 111 aa11.43□□□□□ -0.58
Nid1-201ENSMUST00000005532 Smim1P0C8K7 78 aa11.43□□□□□ -0.58
Nid1-201ENSMUST00000005532 Cox7bP56393 80 aa11.43□□□□□ -0.58
Nid1-201ENSMUST00000005532 Plac8l1Q08EJ0 177 aa11.43□□□□□ -0.58
Nid1-201ENSMUST00000005532 Pla2g2aP31482 146 aa11.43□□□□□ -0.58
Nid1-201ENSMUST00000005532 Fam19a1Q7TPG8 133 aa11.43□□□□□ -0.58
Nid1-201ENSMUST00000005532 Ahctf1Q8CJF7 2243 aaKnown RBP11.42□□□□□ -0.58
Nid1-201ENSMUST00000005532 Pcdh15Q99PJ1 1943 aa11.42□□□□□ -0.58
Nid1-201ENSMUST00000005532 Igkv1-117A0A140T8M0 119 aa11.42□□□□□ -0.58
Nid1-201ENSMUST00000005532 Ighv10-1A0A0B4J1J6 119 aa11.42□□□□□ -0.58
Nid1-201ENSMUST00000005532 Cacna1eQ61290 2272 aa11.42□□□□□ -0.58
Nid1-201ENSMUST00000005532 TshbP12656 138 aa11.42□□□□□ -0.58
Nid1-201ENSMUST00000005532 P06320 134 aa11.41□□□□□ -0.58
Nid1-201ENSMUST00000005532 Gm12689Q8BQU9 117 aa11.41□□□□□ -0.58
Nid1-201ENSMUST00000005532 Med12A2AGH6 2190 aa11.41□□□□□ -0.58
Nid1-201ENSMUST00000005532 Sprr3O09116 238 aa11.4□□□□□ -0.58
Nid1-201ENSMUST00000005532 Spry2Q9QXV8 315 aa11.4□□□□□ -0.58
Nid1-201ENSMUST00000005532 Tcte2E9PY37 120 aa11.4□□□□□ -0.58
Nid1-201ENSMUST00000005532 Eml6Q5SQM0 1958 aa11.4□□□□□ -0.58
Nid1-201ENSMUST00000005532 Igkv3-3A0A140T8Q0 119 aa11.4□□□□□ -0.59
Nid1-201ENSMUST00000005532 Gm9805F6YK59 57 aa11.4□□□□□ -0.59
Nid1-201ENSMUST00000005532 Atox1O08997 68 aaKnown RBP11.4□□□□□ -0.59
Nid1-201ENSMUST00000005532 Col4a6B1AVK5 1691 aa11.39□□□□□ -0.59
Nid1-201ENSMUST00000005532 Prr12E9PYL2 2035 aaKnown RBP11.39□□□□□ -0.59
Nid1-201ENSMUST00000005532 A830005F24RikQ8BRT5 167 aa11.39□□□□□ -0.59
Nid1-201ENSMUST00000005532 Ighv2-6-8A0A0A6YWY9 116 aa11.39□□□□□ -0.59
Nid1-201ENSMUST00000005532 P01729 129 aa11.39□□□□□ -0.59
Nid1-201ENSMUST00000005532 H2al1aQ5M8Q2 105 aa11.39□□□□□ -0.59
Nid1-201ENSMUST00000005532 H2al1eQ810S6 105 aa11.39□□□□□ -0.59
Nid1-201ENSMUST00000005532 Ighv8-11A0A075B5X4 119 aa11.38□□□□□ -0.59
Nid1-201ENSMUST00000005532 Arfgef3Q3UGY8 2170 aa11.38□□□□□ -0.59
Nid1-201ENSMUST00000005532 Cfap46E9Q2C0 2641 aa11.37□□□□□ -0.59
Nid1-201ENSMUST00000005532 Defb13Q8R2I4 64 aa11.37□□□□□ -0.59
Nid1-201ENSMUST00000005532 9430015G10RikA2ASP7 199 aa11.36□□□□□ -0.59
Nid1-201ENSMUST00000005532 Cox8cA6H666 72 aa11.36□□□□□ -0.59
Nid1-201ENSMUST00000005532 Fgfbp3Q1HCM0 245 aa11.36□□□□□ -0.59
Nid1-201ENSMUST00000005532 Nup210Q9QY81 1886 aaKnown RBP11.36□□□□□ -0.59
Nid1-201ENSMUST00000005532 Q9D8Q6 235 aa11.36□□□□□ -0.59
Nid1-201ENSMUST00000005532 Igkv1-110A0A0B4J1I0 119 aa11.36□□□□□ -0.59
Nid1-201ENSMUST00000005532 Ighv2-3A0A075B696 115 aa11.36□□□□□ -0.59
Nid1-201ENSMUST00000005532 Trav14-1A0A0G2JF94 121 aa11.36□□□□□ -0.59
Nid1-201ENSMUST00000005532 Lypd6Q8BPP5 171 aa11.36□□□□□ -0.59
Nid1-201ENSMUST00000005532 Ndufb1P0DN34 57 aa11.36□□□□□ -0.59
Nid1-201ENSMUST00000005532 Cd27P41272 250 aa11.36□□□□□ -0.59
Nid1-201ENSMUST00000005532 Pla2g2dQ9WVF6 144 aa11.36□□□□□ -0.59
Nid1-201ENSMUST00000005532 Ighv1-63A0A075B5X2 117 aa11.35□□□□□ -0.59
Nid1-201ENSMUST00000005532 AvpP35455 168 aa11.35□□□□□ -0.59
Nid1-201ENSMUST00000005532 Ly6gP35461 111 aa11.35□□□□□ -0.59
Nid1-201ENSMUST00000005532 AtrxQ61687 2476 aaKnown RBP11.35□□□□□ -0.59
Nid1-201ENSMUST00000005532 Ncoa6Q9JL19 2067 aa11.35□□□□□ -0.59
Nid1-201ENSMUST00000005532 Fgf23Q9EPC2 251 aa11.35□□□□□ -0.59
Nid1-201ENSMUST00000005532 Gm10337F7DEP7 55 aa11.35□□□□□ -0.59
Nid1-201ENSMUST00000005532 A130051J06RikQ8CAU1 227 aa11.35□□□□□ -0.59
Nid1-201ENSMUST00000005532 Gm16223Q8CBM3 117 aa11.34□□□□□ -0.59
Nid1-201ENSMUST00000005532 P01823 113 aa11.33□□□□□ -0.6
Nid1-201ENSMUST00000005532 Ighv1-62-1A0A075B5U3 116 aa11.33□□□□□ -0.6
Nid1-201ENSMUST00000005532 1520401A03RikA0A0J9YVH6 598 aa11.32□□□□□ -0.6
Nid1-201ENSMUST00000005532 Igkv8-21A0A140T8P7 120 aa11.32□□□□□ -0.6
Nid1-201ENSMUST00000005532 Ighv10-3A0A075B5T6 119 aa11.31□□□□□ -0.6
Nid1-201ENSMUST00000005532 Abca1P41233 2261 aa11.31□□□□□ -0.6
Nid1-201ENSMUST00000005532 Tcf20Q9EPQ8 1987 aa11.31□□□□□ -0.6
Nid1-201ENSMUST00000005532 Ighv1-72P01751 139 aa11.31□□□□□ -0.6
Nid1-201ENSMUST00000005532 ScxQ64124 207 aa11.31□□□□□ -0.6
Nid1-201ENSMUST00000005532 P01755 137 aa11.31□□□□□ -0.6
Nid1-201ENSMUST00000005532 Tet1Q3URK3 2007 aaKnown RBP11.31□□□□□ -0.6
Nid1-201ENSMUST00000005532 Ighv1-66A0A075B5X5 117 aa11.3□□□□□ -0.6
Nid1-201ENSMUST00000005532 BaalcQ8VHV1 145 aa11.3□□□□□ -0.6
Nid1-201ENSMUST00000005532 Ighv3-3A0A0A6YWL2 116 aa11.3□□□□□ -0.6
Nid1-201ENSMUST00000005532 Lmo4P61969 165 aa11.3□□□□□ -0.6
Nid1-201ENSMUST00000005532 5730596B20RikQ8BQ08 205 aa11.29□□□□□ -0.6
Nid1-201ENSMUST00000005532 Ighv1-5A0A0A6YWG2 117 aa11.29□□□□□ -0.6
Nid1-201ENSMUST00000005532 Defb40Q70KL2 73 aa11.29□□□□□ -0.6
Nid1-201ENSMUST00000005532 AcacaQ5SWU9 2345 aa11.28□□□□□ -0.6
Nid1-201ENSMUST00000005532 Gm19935A0A1B0GSF9 52 aa11.28□□□□□ -0.6
Nid1-201ENSMUST00000005532 1700074P13RikQ9D9G7 251 aa11.28□□□□□ -0.6
Nid1-201ENSMUST00000005532 Gm21748Q3UE70 102 aa11.27□□□□□ -0.6
Nid1-201ENSMUST00000005532 E130116L18RikQ8BMV6 101 aa11.27□□□□□ -0.6
Nid1-201ENSMUST00000005532 Ube2d1P61080 147 aaKnown RBP11.27□□□□□ -0.61
Nid1-201ENSMUST00000005532 Gm10577Q3UDV9 132 aa11.27□□□□□ -0.61
Nid1-201ENSMUST00000005532 Ncor2Q9WU42 2472 aaKnown RBP11.27□□□□□ -0.61
Nid1-201ENSMUST00000005532 Fam19a5Q91WE9 132 aa11.26□□□□□ -0.61
Nid1-201ENSMUST00000005532 Pla2g2eQ9QUL3 142 aa11.26□□□□□ -0.61
Nid1-201ENSMUST00000005532 CnfnQ6PCW6 111 aa11.26□□□□□ -0.61
Nid1-201ENSMUST00000005532 Gm20604F8WIA3 75 aa11.25□□□□□ -0.61
Nid1-201ENSMUST00000005532 Polr2kQ63871 58 aa11.25□□□□□ -0.61
Nid1-201ENSMUST00000005532 Psmb11Q8BG41 302 aa11.25□□□□□ -0.61
Nid1-201ENSMUST00000005532 1700011M02RikB1AX35 88 aa11.25□□□□□ -0.61
Nid1-201ENSMUST00000005532 Gm10322F7D7I4 111 aa11.25□□□□□ -0.61
Nid1-201ENSMUST00000005532 4930564D02RikQ9D4S4 103 aa11.25□□□□□ -0.61
Nid1-201ENSMUST00000005532 Gm10226O88253 85 aa11.25□□□□□ -0.61
Nid1-201ENSMUST00000005532 Wisp2Q9Z0G4 251 aa11.25□□□□□ -0.61
Nid1-201ENSMUST00000005532 Ly6c2P0CW03 131 aa11.24□□□□□ -0.61
Nid1-201ENSMUST00000005532 Ccdc179J3QM76 67 aa11.24□□□□□ -0.61
Nid1-201ENSMUST00000005532 A830031A19RikQ8BNT5 113 aa11.24□□□□□ -0.61
Nid1-201ENSMUST00000005532 AgrnA2ASQ1 1950 aa11.24□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 52 ms