RNA–Protein interactions for RNA: ENSMUST00000004097.15

Cux1-201, Transcript of Homeobox protein cut-like 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Cux1, Length 12,862 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-201ENSMUST00000004097 Hist1h2bhQ64478 126 aa6.28□□□□□ -1.4
Cux1-201ENSMUST00000004097 Hist2h2bbQ64525 126 aa6.28□□□□□ -1.4
Cux1-201ENSMUST00000004097 Hist1h2bcQ6ZWY9 126 aaKnown RBP6.28□□□□□ -1.4
Cux1-201ENSMUST00000004097 Hist2h2beQ64524 126 aa6.28□□□□□ -1.4
Cux1-201ENSMUST00000004097 Tmem14cQ9CQN6 114 aa6.28□□□□□ -1.4
Cux1-201ENSMUST00000004097 Pxt1Q8K459 51 aa6.28□□□□□ -1.4
Cux1-201ENSMUST00000004097 Q9D8Q6 235 aa6.28□□□□□ -1.4
Cux1-201ENSMUST00000004097 Sptbn4E9PX29 2561 aa6.28□□□□□ -1.4
Cux1-201ENSMUST00000004097 9130213A22RikQ3V3T2 120 aa6.28□□□□□ -1.4
Cux1-201ENSMUST00000004097 P06329 120 aa6.28□□□□□ -1.4
Cux1-201ENSMUST00000004097 Ighv1-5A0A0A6YWG2 117 aa6.28□□□□□ -1.4
Cux1-201ENSMUST00000004097 CrygsO35486 178 aa6.28□□□□□ -1.4
Cux1-201ENSMUST00000004097 Edn2P22389 175 aa6.28□□□□□ -1.4
Cux1-201ENSMUST00000004097 4930442H23RikQ9D5G7 103 aa6.27□□□□□ -1.41
Cux1-201ENSMUST00000004097 Ccl25O35903 144 aa6.27□□□□□ -1.41
Cux1-201ENSMUST00000004097 Tcl1b2P56841 117 aa6.27□□□□□ -1.41
Cux1-201ENSMUST00000004097 Prr15lQ8JZM2 100 aa6.27□□□□□ -1.41
Cux1-201ENSMUST00000004097 Znf706Q9D115 76 aaKnown RBP6.27□□□□□ -1.41
Cux1-201ENSMUST00000004097 Wfdc12Q9JHY3 85 aa6.27□□□□□ -1.41
Cux1-201ENSMUST00000004097 Foxh1O88621 401 aa6.27□□□□□ -1.41
Cux1-201ENSMUST00000004097 Q08AU9 97 aa6.27□□□□□ -1.41
Cux1-201ENSMUST00000004097 Pcdh15Q99PJ1 1943 aa6.27□□□□□ -1.41
Cux1-201ENSMUST00000004097 P01728 117 aa6.27□□□□□ -1.41
Cux1-201ENSMUST00000004097 Serp2Q6TAW2 65 aa6.27□□□□□ -1.41
Cux1-201ENSMUST00000004097 Ndufc2Q9CQ54 120 aa6.27□□□□□ -1.41
Cux1-201ENSMUST00000004097 Tmem223Q9CQE2 199 aaKnown RBP6.27□□□□□ -1.41
Cux1-201ENSMUST00000004097 Bcorl1A2AQH4 1781 aa6.26□□□□□ -1.41
Cux1-201ENSMUST00000004097 Map6d1Q14BB9 191 aa6.26□□□□□ -1.41
Cux1-201ENSMUST00000004097 Gm4744D3Z3S5 154 aa6.26□□□□□ -1.41
Cux1-201ENSMUST00000004097 Flg2Q2VIS4 2362 aa6.26□□□□□ -1.41
Cux1-201ENSMUST00000004097 Myo9aQ8C170 2542 aa6.26□□□□□ -1.41
Cux1-201ENSMUST00000004097 Obox8V9GWY9 217 aa6.26□□□□□ -1.41
Cux1-201ENSMUST00000004097 Nav2E9Q842 2432 aa6.26□□□□□ -1.41
Cux1-201ENSMUST00000004097 P06320 134 aa6.26□□□□□ -1.41
Cux1-201ENSMUST00000004097 Gm19684G3UZ45 117 aa6.26□□□□□ -1.41
Cux1-201ENSMUST00000004097 Ighv8-8A0A0A6YXQ0 119 aa6.26□□□□□ -1.41
Cux1-201ENSMUST00000004097 Tal2Q62282 108 aa6.26□□□□□ -1.41
Cux1-201ENSMUST00000004097 A730015C16RikQ8C992 119 aa6.26□□□□□ -1.41
Cux1-201ENSMUST00000004097 Lrrk2Q5S006 2527 aa6.26□□□□□ -1.41
Cux1-201ENSMUST00000004097 Golgb1E9PVZ8 3238 aa6.25□□□□□ -1.41
Cux1-201ENSMUST00000004097 PifoQ9D9W1 207 aa6.25□□□□□ -1.41
Cux1-201ENSMUST00000004097 Gm9949Q8C9F4 104 aa6.25□□□□□ -1.41
Cux1-201ENSMUST00000004097 Gm17606F6ZL36 78 aa6.25□□□□□ -1.41
Cux1-201ENSMUST00000004097 Dennd4cA6H8H2 1906 aa6.25□□□□□ -1.41
Cux1-201ENSMUST00000004097 P01660 111 aa6.24□□□□□ -1.41
Cux1-201ENSMUST00000004097 A230072I06RikQ3UUJ8 172 aa6.24□□□□□ -1.41
Cux1-201ENSMUST00000004097 Foxi2Q3I5G5 311 aa6.24□□□□□ -1.41
Cux1-201ENSMUST00000004097 CrygeQ03740 174 aa6.24□□□□□ -1.41
Cux1-201ENSMUST00000004097 CrygfQ9CXV3 174 aa6.24□□□□□ -1.41
Cux1-201ENSMUST00000004097 Hist1h2bfP10853 126 aa6.24□□□□□ -1.41
Cux1-201ENSMUST00000004097 Hist1h2bbQ64475 126 aa6.24□□□□□ -1.41
Cux1-201ENSMUST00000004097 Hist1h2bkQ8CGP1 126 aaKnown RBP6.24□□□□□ -1.41
Cux1-201ENSMUST00000004097 Hist1h2bpQ8CGP2 126 aaKnown RBP6.24□□□□□ -1.41
Cux1-201ENSMUST00000004097 Cd300eQ8K249 196 aa6.24□□□□□ -1.41
Cux1-201ENSMUST00000004097 Nsun4C4P6S0 806 aaKnown RBP6.24□□□□□ -1.41
Cux1-201ENSMUST00000004097 Ntf4Q80VU4 209 aa6.24□□□□□ -1.41
Cux1-201ENSMUST00000004097 Rpl28P41105 137 aaKnown RBP6.23□□□□□ -1.41
Cux1-201ENSMUST00000004097 1810062G17RikG3X8Y2 129 aa6.23□□□□□ -1.41
Cux1-201ENSMUST00000004097 Gm10267M0QWD8 85 aa6.23□□□□□ -1.41
Cux1-201ENSMUST00000004097 AvpP35455 168 aa6.23□□□□□ -1.41
Cux1-201ENSMUST00000004097 9230102O04RikA2ASX7 82 aa6.23□□□□□ -1.41
Cux1-201ENSMUST00000004097 P18528 98 aa6.23□□□□□ -1.41
Cux1-201ENSMUST00000004097 Lypd6Q8BPP5 171 aa6.23□□□□□ -1.41
Cux1-201ENSMUST00000004097 4930519P11RikQ9CUJ8 166 aa6.23□□□□□ -1.41
Cux1-201ENSMUST00000004097 Ttc28Q80XJ3 2450 aa6.23□□□□□ -1.41
Cux1-201ENSMUST00000004097 Gm9767G3X930 207 aa6.23□□□□□ -1.41
Cux1-201ENSMUST00000004097 PrlhG3UWC3 86 aa6.23□□□□□ -1.41
Cux1-201ENSMUST00000004097 Zic4Q61467 341 aa6.23□□□□□ -1.41
Cux1-201ENSMUST00000004097 Crip2Q9DCT8 208 aaKnown RBP6.23□□□□□ -1.41
Cux1-201ENSMUST00000004097 9230109A22RikQ8BHE6 111 aa6.22□□□□□ -1.41
Cux1-201ENSMUST00000004097 Ighv1-85A0A075B5Y6 117 aa6.22□□□□□ -1.41
Cux1-201ENSMUST00000004097 Srsf12Q8C8K3 266 aa6.22□□□□□ -1.41
Cux1-201ENSMUST00000004097 Gm10762Q9CZN6 115 aa6.22□□□□□ -1.41
Cux1-201ENSMUST00000004097 Fstl3Q9EQC7 256 aa6.22□□□□□ -1.41
Cux1-201ENSMUST00000004097 4930535I16RikQ9CUI2 172 aa6.22□□□□□ -1.41
Cux1-201ENSMUST00000004097 Pmaip1Q9JM54 103 aa6.22□□□□□ -1.41
Cux1-201ENSMUST00000004097 A830005F24RikQ8BRT5 167 aa6.22□□□□□ -1.41
Cux1-201ENSMUST00000004097 SrcapA0A087WQ44 3271 aa6.21□□□□□ -1.41
Cux1-201ENSMUST00000004097 9430015G10RikA2ASP7 199 aa6.21□□□□□ -1.41
Cux1-201ENSMUST00000004097 Inafm1E9PV59 130 aa6.21□□□□□ -1.41
Cux1-201ENSMUST00000004097 Gm14137Q8CE97 175 aa6.21□□□□□ -1.41
Cux1-201ENSMUST00000004097 Col5a3Q9JLI2 1739 aa6.21□□□□□ -1.41
Cux1-201ENSMUST00000004097 1500011B03RikQ3TTH7 73 aa6.21□□□□□ -1.42
Cux1-201ENSMUST00000004097 Fam19a4Q7TPG5 135 aa6.21□□□□□ -1.42
Cux1-201ENSMUST00000004097 AngP21570 145 aa6.21□□□□□ -1.42
Cux1-201ENSMUST00000004097 C130032M10RikQ8C888 123 aa6.21□□□□□ -1.42
Cux1-201ENSMUST00000004097 Trav12d-3A0A075B6A4 115 aa6.21□□□□□ -1.42
Cux1-201ENSMUST00000004097 P01820 115 aa6.21□□□□□ -1.42
Cux1-201ENSMUST00000004097 Zfp462B1AWL2 2495 aaKnown RBP6.21□□□□□ -1.42
Cux1-201ENSMUST00000004097 MtorQ9JLN9 2549 aa6.21□□□□□ -1.42
Cux1-201ENSMUST00000004097 Ighv1-82A0A0G2JEU7 117 aa6.2□□□□□ -1.42
Cux1-201ENSMUST00000004097 Cend1Q9JKC6 149 aa6.2□□□□□ -1.42
Cux1-201ENSMUST00000004097 Q8K1L6 76 aa6.2□□□□□ -1.42
Cux1-201ENSMUST00000004097 Trav12-3A0A075B648 115 aa6.2□□□□□ -1.42
Cux1-201ENSMUST00000004097 Col24a1Q30D77 1733 aa6.2□□□□□ -1.42
Cux1-201ENSMUST00000004097 Vpreb1P13372 142 aa6.2□□□□□ -1.42
Cux1-201ENSMUST00000004097 MgamB5THE2 1827 aa6.2□□□□□ -1.42
Cux1-201ENSMUST00000004097 Igkv12-89A0A0G2JGW8 112 aa6.19□□□□□ -1.42
Cux1-201ENSMUST00000004097 Wipf1Q8K1I7 493 aa6.19□□□□□ -1.42
Cux1-201ENSMUST00000004097 Klhdc3Q8VEM9 382 aa6.19□□□□□ -1.42
Retrieved 100 of 22,080 RNA–protein pairs in 57.3 ms