RNA–Protein interactions for RNA: ENSMUST00000213114.1

Ldlr-202, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-202ENSMUST00000213114 Trav4n-4A0A075B615 110 aa7.18□□□□□ -1.26
Ldlr-202ENSMUST00000213114 OdaphJ3QNT8 126 aa7.18□□□□□ -1.26
Ldlr-202ENSMUST00000213114 Fam216aQ9DB54 251 aa7.18□□□□□ -1.26
Ldlr-202ENSMUST00000213114 Ighv1-82A0A0G2JEU7 117 aa7.18□□□□□ -1.26
Ldlr-202ENSMUST00000213114 Znf575Q3TXZ1 239 aa7.18□□□□□ -1.26
Ldlr-202ENSMUST00000213114 Zfp951A0A087WRH0 451 aa7.17□□□□□ -1.26
Ldlr-202ENSMUST00000213114 1810032O08RikE9PZV8 113 aa7.17□□□□□ -1.26
Ldlr-202ENSMUST00000213114 P0C913 63 aa7.17□□□□□ -1.26
Ldlr-202ENSMUST00000213114 Iglc1A0A0G2JE99 106 aa7.17□□□□□ -1.26
Ldlr-202ENSMUST00000213114 P01843 105 aa7.17□□□□□ -1.26
Ldlr-202ENSMUST00000213114 Fhl1P97447 280 aaKnown RBP7.17□□□□□ -1.26
Ldlr-202ENSMUST00000213114 1500011B03RikQ3TTH7 73 aa7.17□□□□□ -1.26
Ldlr-202ENSMUST00000213114 BB014433Q8C5R5 389 aa7.17□□□□□ -1.26
Ldlr-202ENSMUST00000213114 PpdpfQ9CR37 115 aa7.17□□□□□ -1.26
Ldlr-202ENSMUST00000213114 Cryba4Q9JJV0 196 aa7.17□□□□□ -1.26
Ldlr-202ENSMUST00000213114 Prp2P05143 317 aa7.17□□□□□ -1.26
Ldlr-202ENSMUST00000213114 Ighv12-3A0A075B5T1 117 aa7.16□□□□□ -1.26
Ldlr-202ENSMUST00000213114 MsmbO08540 113 aa7.16□□□□□ -1.26
Ldlr-202ENSMUST00000213114 Hoxd3P09027 433 aa7.16□□□□□ -1.26
Ldlr-202ENSMUST00000213114 HampQ9EQ21 83 aa7.16□□□□□ -1.26
Ldlr-202ENSMUST00000213114 Rnf114Q9ET26 229 aa7.16□□□□□ -1.26
Ldlr-202ENSMUST00000213114 Vsig4F6TUL9 280 aa7.16□□□□□ -1.26
Ldlr-202ENSMUST00000213114 Ndufs7Q9DC70 224 aa7.16□□□□□ -1.26
Ldlr-202ENSMUST00000213114 Dad1P61804 113 aa7.16□□□□□ -1.26
Ldlr-202ENSMUST00000213114 P06328 117 aa7.15□□□□□ -1.26
Ldlr-202ENSMUST00000213114 B230307C23RikQ8BLB2 64 aa7.15□□□□□ -1.26
Ldlr-202ENSMUST00000213114 Nop10Q9CQS2 64 aa7.15□□□□□ -1.26
Ldlr-202ENSMUST00000213114 Gm20730A0A075B5J6 119 aa7.15□□□□□ -1.26
Ldlr-202ENSMUST00000213114 Defa27F2Z403 93 aa7.15□□□□□ -1.26
Ldlr-202ENSMUST00000213114 Foxi2Q3I5G5 311 aa7.15□□□□□ -1.26
Ldlr-202ENSMUST00000213114 Gatd1Q8BFQ8 220 aa7.15□□□□□ -1.26
Ldlr-202ENSMUST00000213114 Lrrc37aB1AWG4 3215 aa7.15□□□□□ -1.26
Ldlr-202ENSMUST00000213114 Gm20726G3UX18 150 aa7.15□□□□□ -1.27
Ldlr-202ENSMUST00000213114 P01747 120 aa7.15□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Rbmy1bQ60990 380 aa7.15□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Shisa9Q9CZN4 424 aa7.15□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Prrc2cQ3TLH4 2846 aaKnown RBP7.15□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Igkv3-1A0A075B5P1 119 aa7.15□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Ighv2-6A0A075B6A7 116 aa7.15□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Igkv4-74A0A0B4J1I3 119 aa7.15□□□□□ -1.27
Ldlr-202ENSMUST00000213114 BC107364E9Q5A2 140 aa7.15□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Fam19a4Q7TPG5 135 aa7.15□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Gm16381A0A1Y7VKT9 73 aa7.14□□□□□ -1.27
Ldlr-202ENSMUST00000213114 A130051J06RikQ8CAU1 227 aa7.14□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Tcte2E9PY37 120 aa7.14□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Pfn2Q9JJV2 140 aa7.14□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Dmxl1Q6PNC0 3013 aa7.14□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Trav9d-3A0A075B695 113 aa7.14□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Cep192E9Q4Y4 2514 aaKnown RBP7.14□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Gm42674D3YUT9 64 aa7.13□□□□□ -1.27
Ldlr-202ENSMUST00000213114 MalO09198 153 aa7.13□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Defb47Q30KN1 79 aa7.13□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Tmem86bQ497J1 226 aa7.13□□□□□ -1.27
Ldlr-202ENSMUST00000213114 B430305J03RikQ8BQQ8 176 aa7.13□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Cdk2ap2Q9CPY4 127 aa7.13□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Chchd5Q9CQP3 110 aa7.13□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Nbeal1E9PYP2 2688 aa7.13□□□□□ -1.27
Ldlr-202ENSMUST00000213114 TroQ6DIC6 2087 aa7.13□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Odf1Q61999 247 aa7.13□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Srsf2Q62093 221 aaKnown RBP7.13□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Snai3Q9QY31 287 aa7.13□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Rnase1P00683 149 aa7.13□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Foxc1Q61572 553 aa7.13□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Mpv17l2Q8VIK2 200 aa7.13□□□□□ -1.27
Ldlr-202ENSMUST00000213114 AspmQ8CJ27 3122 aa7.13□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Ebi3O35228 228 aa7.13□□□□□ -1.27
Ldlr-202ENSMUST00000213114 PlaurP35456 327 aa7.13□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Fbn2Q61555 2907 aa7.12□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Socs3O35718 225 aa7.12□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Gm12057A0A087WR21 115 aa7.12□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Samd13D3YUG0 102 aa7.12□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Pet100P0DJE0 76 aa7.12□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Rmi2Q3UPE3 149 aa7.12□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Rnf185Q91YT2 192 aa7.12□□□□□ -1.27
Ldlr-202ENSMUST00000213114 DmdP11531 3678 aa7.12□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Col6a3E9PWQ3 3284 aa7.12□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Lyrm9Q3UN90 78 aa7.12□□□□□ -1.27
Ldlr-202ENSMUST00000213114 A530064D06RikQ8BNV8 229 aa7.12□□□□□ -1.27
Ldlr-202ENSMUST00000213114 PtprqP0C5E4 2300 aa7.11□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Igkv6-13A0A0G2JGY3 119 aa7.11□□□□□ -1.27
Ldlr-202ENSMUST00000213114 March3Q8BRX9 218 aa7.11□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Trbv16A0A0B4J1H3 115 aa7.11□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Ndufa1O35683 70 aa7.11□□□□□ -1.27
Ldlr-202ENSMUST00000213114 4930415O20RikQ8CDT5 131 aa7.11□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Ifitm1Q9D103 106 aa7.11□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Usp9yF8VPU6 2556 aa7.11□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Col5a1O88207 1838 aa7.11□□□□□ -1.27
Ldlr-202ENSMUST00000213114 P84751 237 aa7.1□□□□□ -1.27
Ldlr-202ENSMUST00000213114 BtcQ05928 177 aa7.1□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Igkv3-2A0A075B5P0 119 aa7.1□□□□□ -1.27
Ldlr-202ENSMUST00000213114 C920008G01RikA0A0B4J1N1 112 aa7.1□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Cd99Q8VCN6 175 aa7.1□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Odf3Q920N1 254 aa7.1□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Gm28539A0A087WSL9 92 aa7.1□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Igkv8-34A0A0G2JDU0 121 aa7.1□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Igkv4-62A0A0G2JDW9 117 aa7.1□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Igkv4-53A0A0G2JFC6 119 aa7.1□□□□□ -1.27
Ldlr-202ENSMUST00000213114 Tmem243B2RVB9 118 aa7.1□□□□□ -1.27
Ldlr-202ENSMUST00000213114 LeprotO89013 131 aa7.1□□□□□ -1.27
Ldlr-202ENSMUST00000213114 KalrnA2CG49 2964 aa7.1□□□□□ -1.27
Retrieved 100 of 22,080 RNA–protein pairs in 44.7 ms