RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Gm14137Q8CE97 175 aa9.69□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Pradc1Q9D9N8 188 aa9.69□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 C2cd3Q52KB6 2323 aa9.68□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Brd3osA0A1B0GRB6 84 aa9.68□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Gata1P17679 413 aa9.68□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Nhlrc1Q8BR37 401 aa9.68□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Cd164l2Q9D6W7 172 aa9.68□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 BsnO88737 3942 aa9.68□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Tcrg-C1A0A075B5Z0 172 aa9.68□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Bak1O08734 209 aa9.68□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 FcorP0DJI6 106 aa9.68□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Cks1brtQ3UNC9 96 aa9.68□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Atp5lQ9CPQ8 103 aa9.68□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Tenm3Q9WTS6 2715 aa9.67□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Gm9767G3X930 207 aa9.67□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Sap30O88574 220 aa9.67□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 G0s2Q61585 103 aa9.67□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Snx22Q8C084 192 aa9.67□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Tmem97Q8VD00 176 aa9.67□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Cysltr1Q99JA4 352 aa9.67□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Q9D727 114 aa9.67□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Lypd5Q9D7Z7 256 aa9.67□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 AY761184Q9D848 116 aa9.67□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Epg5Q80TA9 2572 aa9.66□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Gm17472A0A075B683 117 aa9.66□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 P01741 114 aa9.66□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Mc5rP41149 325 aa9.66□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 BtcQ05928 177 aa9.66□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Chchd7Q8K2Q5 85 aa9.66□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Ndufs7Q9DC70 224 aa9.66□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Plac1Q9JI83 173 aa9.66□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Nat8b-psE0CYC6 232 aa9.65□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Gm21693J3QK27 380 aa9.65□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Cox7cP17665 63 aa9.65□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Defa9P50707 93 aa9.65□□□□□ -0.87
Pdlim5-208ENSMUST00000196220 Gm1553Q66VB7 94 aa9.65□□□□□ -0.87
Pdlim5-208ENSMUST00000196220 BC106179Q8C9L1 186 aa9.65□□□□□ -0.87
Pdlim5-208ENSMUST00000196220 Tmem263Q9DAM7 115 aa9.65□□□□□ -0.87
Pdlim5-208ENSMUST00000196220 Dpm2Q9Z324 84 aa9.65□□□□□ -0.87
Pdlim5-208ENSMUST00000196220 Usp9yF8VPU6 2556 aa9.64□□□□□ -0.87
Pdlim5-208ENSMUST00000196220 Gm10322F7D7I4 111 aa9.64□□□□□ -0.87
Pdlim5-208ENSMUST00000196220 Q9D8Q6 235 aa9.64□□□□□ -0.87
Pdlim5-208ENSMUST00000196220 MtorQ9JLN9 2549 aa9.64□□□□□ -0.87
Pdlim5-208ENSMUST00000196220 Ighv1-11A0A0A6YWI9 117 aa9.63□□□□□ -0.87
Pdlim5-208ENSMUST00000196220 Trav9n-2A0A0G2JDP3 113 aa9.63□□□□□ -0.87
Pdlim5-208ENSMUST00000196220 LeprotO89013 131 aa9.63□□□□□ -0.87
Pdlim5-208ENSMUST00000196220 Gatd1Q8BFQ8 220 aa9.63□□□□□ -0.87
Pdlim5-208ENSMUST00000196220 Defb45Q3V490 66 aa9.62□□□□□ -0.87
Pdlim5-208ENSMUST00000196220 Igkv2-137A0A0B4J1H6 120 aa9.62□□□□□ -0.87
Pdlim5-208ENSMUST00000196220 PrlhG3UWC3 86 aa9.62□□□□□ -0.87
Pdlim5-208ENSMUST00000196220 Ighv1-72P01751 139 aa9.62□□□□□ -0.87
Pdlim5-208ENSMUST00000196220 Foxi2Q3I5G5 311 aa9.62□□□□□ -0.87
Pdlim5-208ENSMUST00000196220 H1fxQ80ZM5 188 aa9.62□□□□□ -0.87
Pdlim5-208ENSMUST00000196220 3110070M22RikQ9DAQ7 118 aa9.62□□□□□ -0.87
Pdlim5-208ENSMUST00000196220 Igkv4-91A0A075B5L2 119 aa9.61□□□□□ -0.87
Pdlim5-208ENSMUST00000196220 Cox6b1P56391 86 aaKnown RBP9.61□□□□□ -0.87
Pdlim5-208ENSMUST00000196220 Mpv17l2Q8VIK2 200 aa9.61□□□□□ -0.87
Pdlim5-208ENSMUST00000196220 Ankrd39Q9D2X0 183 aa9.61□□□□□ -0.87
Pdlim5-208ENSMUST00000196220 Phlda3Q9WV95 125 aa9.61□□□□□ -0.87
Pdlim5-208ENSMUST00000196220 Trav8-1A0A075B641 109 aa9.6□□□□□ -0.87
Pdlim5-208ENSMUST00000196220 Gm29289A0A087WPY7 166 aa9.6□□□□□ -0.87
Pdlim5-208ENSMUST00000196220 Gm4064A0A087WR82 380 aa9.6□□□□□ -0.87
Pdlim5-208ENSMUST00000196220 Gm10352B2RWR6 380 aa9.6□□□□□ -0.87
Pdlim5-208ENSMUST00000196220 Rbmy1a1O35698 380 aa9.6□□□□□ -0.87
Pdlim5-208ENSMUST00000196220 Fam19a4Q7TPG5 135 aa9.6□□□□□ -0.87
Pdlim5-208ENSMUST00000196220 GfyJ3KML8 504 aa9.59□□□□□ -0.87
Pdlim5-208ENSMUST00000196220 Ly6c2P0CW03 131 aa9.59□□□□□ -0.87
Pdlim5-208ENSMUST00000196220 SbsponQ3UPR9 264 aa9.59□□□□□ -0.87
Pdlim5-208ENSMUST00000196220 Dmrt3Q80WT2 476 aa9.59□□□□□ -0.87
Pdlim5-208ENSMUST00000196220 Atxn7l1Q9CZ05 146 aa9.59□□□□□ -0.87
Pdlim5-208ENSMUST00000196220 Zfp462B1AWL2 2495 aaKnown RBP9.59□□□□□ -0.87
Pdlim5-208ENSMUST00000196220 Gm44965A0A0N4SVR3 59 aa9.59□□□□□ -0.87
Pdlim5-208ENSMUST00000196220 Krtap24-1G3X9A2 248 aa9.59□□□□□ -0.87
Pdlim5-208ENSMUST00000196220 Cited1P97769 203 aa9.59□□□□□ -0.87
Pdlim5-208ENSMUST00000196220 Bsph2Q0Q236 131 aa9.59□□□□□ -0.87
Pdlim5-208ENSMUST00000196220 Esp4A8R0T8 117 aa9.58□□□□□ -0.88
Pdlim5-208ENSMUST00000196220 OdaphJ3QNT8 126 aa9.58□□□□□ -0.88
Pdlim5-208ENSMUST00000196220 Rpl36aP83882 106 aaKnown RBP9.58□□□□□ -0.88
Pdlim5-208ENSMUST00000196220 Gm21370Q3T9V6 190 aa9.58□□□□□ -0.88
Pdlim5-208ENSMUST00000196220 Trav7-2Q5R1I3 112 aa9.58□□□□□ -0.88
Pdlim5-208ENSMUST00000196220 Crlf1Q9JM58 425 aa9.58□□□□□ -0.88
Pdlim5-208ENSMUST00000196220 Muc4Q8JZM8 3443 aa9.58□□□□□ -0.88
Pdlim5-208ENSMUST00000196220 Wfdc21Q8BTE6 63 aa9.57□□□□□ -0.88
Pdlim5-208ENSMUST00000196220 Trdv5A0A075B661 115 aa9.56□□□□□ -0.88
Pdlim5-208ENSMUST00000196220 Gm42674D3YUT9 64 aa9.56□□□□□ -0.88
Pdlim5-208ENSMUST00000196220 SrarpQ3ULG3 163 aa9.56□□□□□ -0.88
Pdlim5-208ENSMUST00000196220 Gm10300Q8C8P7 189 aa9.56□□□□□ -0.88
Pdlim5-208ENSMUST00000196220 Mrpl35Q9CQL6 188 aa9.56□□□□□ -0.88
Pdlim5-208ENSMUST00000196220 NipblQ6KCD5 2798 aaKnown RBP9.56□□□□□ -0.88
Pdlim5-208ENSMUST00000196220 Chd9Q8BYH8 2885 aa9.56□□□□□ -0.88
Pdlim5-208ENSMUST00000196220 Iglc1A0A0G2JE99 106 aa9.56□□□□□ -0.88
Pdlim5-208ENSMUST00000196220 Gm45717A0A1B0GT68 152 aa9.56□□□□□ -0.88
Pdlim5-208ENSMUST00000196220 Gm9887F6RFI0 207 aa9.56□□□□□ -0.88
Pdlim5-208ENSMUST00000196220 P01843 105 aa9.56□□□□□ -0.88
Pdlim5-208ENSMUST00000196220 Tmem101Q91VP7 257 aa9.56□□□□□ -0.88
Pdlim5-208ENSMUST00000196220 Rbmxl2Q9DAE2 385 aaKnown RBP9.56□□□□□ -0.88
Pdlim5-208ENSMUST00000196220 Tnfrsf23Q9ER63 176 aa9.56□□□□□ -0.88
Pdlim5-208ENSMUST00000196220 Gm45753A0A1C7CYU8 86 aa9.55□□□□□ -0.88
Pdlim5-208ENSMUST00000196220 Gm26602M0QWA4 95 aa9.55□□□□□ -0.88
Pdlim5-208ENSMUST00000196220 Ube2d1P61080 147 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 55.4 ms