RNA–Protein interactions for RNA: ENSMUST00000111042.2

Bdnf-202, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 3,905 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-202ENSMUST00000111042 Ighv3-3A0A0A6YWL2 116 aa6.23□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Gm11020F6ZGD5 61 aa6.23□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Rnase1P00683 149 aa6.23□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Spink10Q8CAC8 162 aa6.23□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Ankrd39Q9D2X0 183 aa6.23□□□□□ -1.41
Bdnf-202ENSMUST00000111042 4930470P17RikQ9D542 155 aa6.23□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Gm42674D3YUT9 64 aa6.22□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Fam19a4Q7TPG5 135 aa6.22□□□□□ -1.41
Bdnf-202ENSMUST00000111042 DspE9Q557 2883 aaKnown RBP6.22□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Gm7257D3YX25 99 aa6.22□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Erdr1J3QMM0 206 aa6.22□□□□□ -1.41
Bdnf-202ENSMUST00000111042 BtcQ05928 177 aa6.22□□□□□ -1.41
Bdnf-202ENSMUST00000111042 1520401A03RikA0A0J9YVH6 598 aa6.22□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Fgf6P21658 208 aa6.22□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Crip3Q6Q6R3 243 aa6.22□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Fam216aQ9DB54 251 aa6.22□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Tmem238A9JSM3 176 aa6.21□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Gemin7Q9CWY4 129 aa6.21□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Akap9Q70FJ1 3797 aa6.21□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Gm45785A0A1B0GT05 94 aa6.21□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Gm11444F6QMA6 170 aa6.21□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Gm26727M0QWT1 121 aa6.21□□□□□ -1.42
Bdnf-202ENSMUST00000111042 ColqO35348 457 aa6.21□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Fhl2O70433 279 aa6.21□□□□□ -1.42
Bdnf-202ENSMUST00000111042 P01837 106 aa6.21□□□□□ -1.42
Bdnf-202ENSMUST00000111042 CckP09240 115 aa6.21□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Ighv1-49A0A0A6YWX2 117 aa6.21□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Gm44965A0A0N4SVR3 59 aa6.21□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Lect2O88803 151 aa6.21□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Dppa2Q9CWH0 301 aa6.2□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Gm11555B1AQ89 175 aa6.2□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Igkv4-69A0A0B4J1I6 116 aa6.2□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Iglc1A0A0G2JE99 106 aa6.19□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Scgb1b24B1B0N6 92 aa6.19□□□□□ -1.42
Bdnf-202ENSMUST00000111042 P01843 105 aa6.19□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Psmb8P28063 276 aa6.19□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Defb2P82020 71 aa6.19□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Nop10Q9CQS2 64 aa6.19□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Mpv17l2Q8VIK2 200 aa6.19□□□□□ -1.42
Bdnf-202ENSMUST00000111042 CtrlQ9ER05 264 aa6.19□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Timm17aQ9Z0V8 171 aa6.19□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Trav4n-4A0A075B615 110 aa6.19□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Pglyrp1O88593 182 aa6.19□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Rnf183Q8QZS5 190 aa6.19□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Cox17P56394 63 aa6.18□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Tomm7Q9D173 55 aa6.18□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Lelp1Q9DAE3 120 aa6.18□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Clec5aQ9R007 190 aa6.18□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Gm20730A0A075B5J6 119 aa6.18□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Prp2P05143 317 aa6.18□□□□□ -1.42
Bdnf-202ENSMUST00000111042 FcorP0DJI6 106 aa6.18□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Cox7cP17665 63 aa6.18□□□□□ -1.42
Bdnf-202ENSMUST00000111042 P84751 237 aa6.18□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Polr2kQ63871 58 aa6.18□□□□□ -1.42
Bdnf-202ENSMUST00000111042 March3Q8BRX9 218 aa6.18□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Ifitm1Q9D103 106 aa6.18□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Gm9195A0A140LHT4 2805 aa6.18□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Ighv1-66A0A075B5X5 117 aa6.18□□□□□ -1.42
Bdnf-202ENSMUST00000111042 A930009A15RikG3UYI6 118 aa6.18□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Ankrd17Q99NH0 2603 aaKnown RBP6.18□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Ccl25O35903 144 aa6.18□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Psmb11Q8BG41 302 aa6.18□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Zfhx4Q9JJN2 3550 aa6.17□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Trav9d-3A0A075B695 113 aa6.17□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Gm8439G3UWA7 96 aa6.17□□□□□ -1.42
Bdnf-202ENSMUST00000111042 LeprotO89013 131 aa6.17□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Gphb5Q812B2 130 aa6.17□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Q99M08 65 aa6.17□□□□□ -1.42
Bdnf-202ENSMUST00000111042 C920008G01RikA0A0B4J1N1 112 aa6.17□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Wfdc15aQ8BH89 80 aa6.17□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Mrpl35Q9CQL6 188 aa6.17□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Xlr5cQ9JJR2 179 aa6.17□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Gm11563B1AQ90 168 aa6.17□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Rmi2Q3UPE3 149 aa6.17□□□□□ -1.42
Bdnf-202ENSMUST00000111042 RetnQ99P87 114 aa6.17□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Krtap4-7Q9D732 168 aa6.17□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Ighv1-85A0A075B5Y6 117 aa6.16□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Gm10490F6VBM2 120 aa6.16□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Ang3P97802 145 aa6.16□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Gm10295Q8CCF3 114 aa6.16□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Leap2Q91V13 76 aa6.16□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Cox6cQ9CPQ1 76 aa6.16□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Gm29423A0A087WRM1 55 aa6.16□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Gm28269A0A087WSG3 125 aa6.16□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Gm26602M0QWA4 95 aa6.16□□□□□ -1.42
Bdnf-202ENSMUST00000111042 A530064D06RikQ8BNV8 229 aa6.16□□□□□ -1.42
Bdnf-202ENSMUST00000111042 4930564D02RikQ9D4S4 103 aa6.15□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Trank1Q8BV79 2999 aa6.15□□□□□ -1.42
Bdnf-202ENSMUST00000111042 Ighv1-63A0A075B5X2 117 aa6.15□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Trav13d-1A0A075B606 110 aa6.15□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Triap1Q9D8Z2 76 aa6.15□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Igkv4-62A0A0G2JDW9 117 aa6.15□□□□□ -1.43
Bdnf-202ENSMUST00000111042 PrlhG3UWC3 86 aa6.15□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Lyrm9Q3UN90 78 aa6.15□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Fam110dQ80X91 271 aa6.14□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Bles03Q8VD62 251 aa6.14□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Phpt1Q9DAK9 124 aa6.14□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Znf580Q9DB38 172 aa6.14□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Insl3O09107 122 aa6.14□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Cops9Q3U898 57 aa6.14□□□□□ -1.43
Retrieved 100 of 22,080 RNA–protein pairs in 35.6 ms