RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Smim10l1A0A087WNQ7 89 aa11.67□□□□□ -0.54
Trim39-203ENSMUST00000113706 Esp3J3QN49 87 aa11.67□□□□□ -0.54
Trim39-203ENSMUST00000113706 NpsP0C0P8 89 aa11.67□□□□□ -0.54
Trim39-203ENSMUST00000113706 C1qcQ02105 246 aa11.67□□□□□ -0.54
Trim39-203ENSMUST00000113706 Sdhaf1Q3U276 118 aa11.67□□□□□ -0.54
Trim39-203ENSMUST00000113706 Olfr313Q5NC55 308 aa11.67□□□□□ -0.54
Trim39-203ENSMUST00000113706 P01794 123 aa11.67□□□□□ -0.54
Trim39-203ENSMUST00000113706 AngP21570 145 aa11.67□□□□□ -0.54
Trim39-203ENSMUST00000113706 Slc25a20Q9Z2Z6 301 aaKnown RBP11.67□□□□□ -0.54
Trim39-203ENSMUST00000113706 Emp2O88662 172 aa11.67□□□□□ -0.54
Trim39-203ENSMUST00000113706 Gnb1lQ9EQ15 326 aa11.67□□□□□ -0.54
Trim39-203ENSMUST00000113706 Rs1Q9Z1L4 224 aa11.67□□□□□ -0.54
Trim39-203ENSMUST00000113706 Tmem238lA0A1B0GS74 79 aa11.66□□□□□ -0.54
Trim39-203ENSMUST00000113706 Umad1E0CX23 159 aa11.66□□□□□ -0.54
Trim39-203ENSMUST00000113706 Clec4b2Q67DU8 208 aa11.66□□□□□ -0.54
Trim39-203ENSMUST00000113706 Hnrnpa3Q8BG05 379 aaKnown RBP11.66□□□□□ -0.54
Trim39-203ENSMUST00000113706 Ceacam15A0A0B4J1L0 234 aa11.65□□□□□ -0.54
Trim39-203ENSMUST00000113706 Gm7849D3YX03 116 aa11.65□□□□□ -0.54
Trim39-203ENSMUST00000113706 Ly6g5bQ8K1T4 194 aa11.65□□□□□ -0.54
Trim39-203ENSMUST00000113706 BC107364E9Q5A2 140 aa11.65□□□□□ -0.54
Trim39-203ENSMUST00000113706 BtcQ05928 177 aa11.65□□□□□ -0.54
Trim39-203ENSMUST00000113706 4930470P17RikQ9D542 155 aa11.65□□□□□ -0.54
Trim39-203ENSMUST00000113706 NipblQ6KCD5 2798 aaKnown RBP11.65□□□□□ -0.54
Trim39-203ENSMUST00000113706 Trbv13-1A0A0B4J1P8 112 aa11.65□□□□□ -0.54
Trim39-203ENSMUST00000113706 P01753 117 aa11.65□□□□□ -0.54
Trim39-203ENSMUST00000113706 TcraP01849 138 aa11.65□□□□□ -0.54
Trim39-203ENSMUST00000113706 Gpx1P11352 201 aa11.65□□□□□ -0.54
Trim39-203ENSMUST00000113706 CtrlQ9ER05 264 aa11.65□□□□□ -0.54
Trim39-203ENSMUST00000113706 Crlf1Q9JM58 425 aa11.65□□□□□ -0.54
Trim39-203ENSMUST00000113706 Tenm4Q3UHK6 2771 aa11.64□□□□□ -0.55
Trim39-203ENSMUST00000113706 8030423J24RikQ9CX45 142 aa11.64□□□□□ -0.55
Trim39-203ENSMUST00000113706 Gm5629P06327 117 aa11.64□□□□□ -0.55
Trim39-203ENSMUST00000113706 Pcp4P63054 62 aa11.64□□□□□ -0.55
Trim39-203ENSMUST00000113706 1500011B03RikQ3TTH7 73 aa11.64□□□□□ -0.55
Trim39-203ENSMUST00000113706 Gm20499D3Z4G5 72 aa11.64□□□□□ -0.55
Trim39-203ENSMUST00000113706 Ormdl2Q9CQZ0 153 aa11.64□□□□□ -0.55
Trim39-203ENSMUST00000113706 CicQ924A2 2510 aa11.63□□□□□ -0.55
Trim39-203ENSMUST00000113706 Spag11Q8K4N2 71 aa11.63□□□□□ -0.55
Trim39-203ENSMUST00000113706 Trbv16A0A0B4J1H3 115 aa11.63□□□□□ -0.55
Trim39-203ENSMUST00000113706 Iah1Q9DB29 249 aa11.63□□□□□ -0.55
Trim39-203ENSMUST00000113706 Gm7075D3Z497 112 aa11.62□□□□□ -0.55
Trim39-203ENSMUST00000113706 Gm17430F6RSK3 157 aa11.62□□□□□ -0.55
Trim39-203ENSMUST00000113706 Chac1Q8R3J5 223 aa11.62□□□□□ -0.55
Trim39-203ENSMUST00000113706 P01786 117 aa11.62□□□□□ -0.55
Trim39-203ENSMUST00000113706 Gm16442D3YZG3 307 aa11.62□□□□□ -0.55
Trim39-203ENSMUST00000113706 Defa30E9QPZ2 93 aa11.62□□□□□ -0.55
Trim39-203ENSMUST00000113706 Krtap24-1G3X9A2 248 aa11.62□□□□□ -0.55
Trim39-203ENSMUST00000113706 P18527 97 aa11.62□□□□□ -0.55
Trim39-203ENSMUST00000113706 Wfdc21Q8BTE6 63 aa11.62□□□□□ -0.55
Trim39-203ENSMUST00000113706 Ube2v1Q9CZY3 147 aa11.62□□□□□ -0.55
Trim39-203ENSMUST00000113706 Sap30O88574 220 aa11.61□□□□□ -0.55
Trim39-203ENSMUST00000113706 PmvkQ9D1G2 192 aa11.61□□□□□ -0.55
Trim39-203ENSMUST00000113706 PerpQ9JK95 193 aa11.61□□□□□ -0.55
Trim39-203ENSMUST00000113706 Gm3233E9Q2H5 230 aa11.61□□□□□ -0.55
Trim39-203ENSMUST00000113706 Defa6P50704 93 aa11.61□□□□□ -0.55
Trim39-203ENSMUST00000113706 Egr2P08152 470 aa11.6□□□□□ -0.55
Trim39-203ENSMUST00000113706 Fgf6P21658 208 aa11.6□□□□□ -0.55
Trim39-203ENSMUST00000113706 Polr2kQ63871 58 aa11.6□□□□□ -0.55
Trim39-203ENSMUST00000113706 PpdpfQ9CR37 115 aa11.6□□□□□ -0.55
Trim39-203ENSMUST00000113706 Josd1Q9DBJ6 202 aa11.6□□□□□ -0.55
Trim39-203ENSMUST00000113706 Dmbt1Q60997 2085 aa11.6□□□□□ -0.55
Trim39-203ENSMUST00000113706 Fbn1Q61554 2873 aaKnown RBP11.6□□□□□ -0.55
Trim39-203ENSMUST00000113706 Lgals6O54891 301 aa11.6□□□□□ -0.55
Trim39-203ENSMUST00000113706 Rbx1P62878 108 aa11.6□□□□□ -0.55
Trim39-203ENSMUST00000113706 Pglyrp1O88593 182 aa11.59□□□□□ -0.55
Trim39-203ENSMUST00000113706 Csn3P06796 181 aa11.59□□□□□ -0.55
Trim39-203ENSMUST00000113706 Gata3P23772 443 aa11.59□□□□□ -0.55
Trim39-203ENSMUST00000113706 H1fxQ80ZM5 188 aa11.59□□□□□ -0.55
Trim39-203ENSMUST00000113706 Igkv4-68A0A0B4J1I7 117 aa11.59□□□□□ -0.55
Trim39-203ENSMUST00000113706 Defa34D3Z0J0 93 aa11.59□□□□□ -0.55
Trim39-203ENSMUST00000113706 Gm17732E9Q5I2 61 aa11.59□□□□□ -0.55
Trim39-203ENSMUST00000113706 Defa37K9J724 93 aa11.59□□□□□ -0.55
Trim39-203ENSMUST00000113706 Defa5P28312 93 aa11.59□□□□□ -0.55
Trim39-203ENSMUST00000113706 Fam110dQ80X91 271 aa11.59□□□□□ -0.55
Trim39-203ENSMUST00000113706 Sec11aQ9R0P6 179 aa11.59□□□□□ -0.55
Trim39-203ENSMUST00000113706 Gm10490F6VBM2 120 aa11.58□□□□□ -0.56
Trim39-203ENSMUST00000113706 Cd164l2Q9D6W7 172 aa11.58□□□□□ -0.56
Trim39-203ENSMUST00000113706 HampQ9EQ21 83 aa11.58□□□□□ -0.56
Trim39-203ENSMUST00000113706 Ndufa1O35683 70 aa11.58□□□□□ -0.56
Trim39-203ENSMUST00000113706 Rpl32P62911 135 aaKnown RBP11.58□□□□□ -0.56
Trim39-203ENSMUST00000113706 Smrp1Q2MH31 260 aa11.58□□□□□ -0.56
Trim39-203ENSMUST00000113706 Ss18Q62280 418 aa11.58□□□□□ -0.56
Trim39-203ENSMUST00000113706 Tex48Q9DA81 110 aa11.58□□□□□ -0.56
Trim39-203ENSMUST00000113706 Gm10300Q8C8P7 189 aa11.58□□□□□ -0.56
Trim39-203ENSMUST00000113706 Gm45213A0A0U1RNZ6 101 aa11.57□□□□□ -0.56
Trim39-203ENSMUST00000113706 A730046J19RikA0A1B0GSN8 89 aa11.57□□□□□ -0.56
Trim39-203ENSMUST00000113706 Gm7489Q3UT34 171 aa11.57□□□□□ -0.56
Trim39-203ENSMUST00000113706 Vmn1r197Q8R265 298 aa11.57□□□□□ -0.56
Trim39-203ENSMUST00000113706 Lypd5Q9D7Z7 256 aa11.57□□□□□ -0.56
Trim39-203ENSMUST00000113706 BatfO35284 125 aa11.56□□□□□ -0.56
Trim39-203ENSMUST00000113706 Mc5rP41149 325 aa11.56□□□□□ -0.56
Trim39-203ENSMUST00000113706 CdsnQ7TPC1 561 aa11.56□□□□□ -0.56
Trim39-203ENSMUST00000113706 Hspg2Q05793 3707 aaKnown RBP11.56□□□□□ -0.56
Trim39-203ENSMUST00000113706 Gm12057A0A087WR21 115 aa11.56□□□□□ -0.56
Trim39-203ENSMUST00000113706 Gm10271F6WY25 52 aa11.56□□□□□ -0.56
Trim39-203ENSMUST00000113706 Krtap27-1E9PX37 202 aa11.56□□□□□ -0.56
Trim39-203ENSMUST00000113706 Rpl39P62892 51 aa11.56□□□□□ -0.56
Trim39-203ENSMUST00000113706 G0s2Q61585 103 aa11.56□□□□□ -0.56
Trim39-203ENSMUST00000113706 Htr1dQ61224 374 aa11.55□□□□□ -0.56
Trim39-203ENSMUST00000113706 Ifi27l2aQ8R412 90 aa11.55□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 64.6 ms