RNA–Protein interactions for RNA: ENSMUST00000111044.2

Bdnf-204, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,854 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-204ENSMUST00000111044 Rpl39P62892 51 aa5.69□□□□□ -1.5
Bdnf-204ENSMUST00000111044 4930432M17RikQ3V0W9 174 aa5.69□□□□□ -1.5
Bdnf-204ENSMUST00000111044 Fhl4Q8CDC8 279 aa5.69□□□□□ -1.5
Bdnf-204ENSMUST00000111044 Mpv17l2Q8VIK2 200 aa5.69□□□□□ -1.5
Bdnf-204ENSMUST00000111044 Nav2E9Q842 2432 aa5.69□□□□□ -1.5
Bdnf-204ENSMUST00000111044 Ighv1-4A0A075B5T4 117 aa5.69□□□□□ -1.5
Bdnf-204ENSMUST00000111044 F11rO88792 300 aa5.69□□□□□ -1.5
Bdnf-204ENSMUST00000111044 Defa7P50705 93 aa5.69□□□□□ -1.5
Bdnf-204ENSMUST00000111044 CirbpP60824 172 aaKnown RBP5.69□□□□□ -1.5
Bdnf-204ENSMUST00000111044 Cops9Q3U898 57 aa5.69□□□□□ -1.5
Bdnf-204ENSMUST00000111044 Spata46Q4FZF2 204 aa5.69□□□□□ -1.5
Bdnf-204ENSMUST00000111044 AdipoqQ60994 247 aa5.69□□□□□ -1.5
Bdnf-204ENSMUST00000111044 4930544G11RikQ9CR99 193 aa5.69□□□□□ -1.5
Bdnf-204ENSMUST00000111044 Znf575Q3TXZ1 239 aa5.68□□□□□ -1.5
Bdnf-204ENSMUST00000111044 P01725 110 aa5.68□□□□□ -1.5
Bdnf-204ENSMUST00000111044 CenpwQ3URR0 86 aa5.68□□□□□ -1.5
Bdnf-204ENSMUST00000111044 Gm17334Q8C6U3 126 aa5.68□□□□□ -1.5
Bdnf-204ENSMUST00000111044 Zfp951A0A087WRH0 451 aa5.68□□□□□ -1.5
Bdnf-204ENSMUST00000111044 Trav4-3A0A0B4J1K1 110 aa5.68□□□□□ -1.5
Bdnf-204ENSMUST00000111044 Gm15217A2CG07 155 aa5.68□□□□□ -1.5
Bdnf-204ENSMUST00000111044 Gm17732E9Q5I2 61 aa5.68□□□□□ -1.5
Bdnf-204ENSMUST00000111044 P01820 115 aa5.68□□□□□ -1.5
Bdnf-204ENSMUST00000111044 Ss18Q62280 418 aa5.68□□□□□ -1.5
Bdnf-204ENSMUST00000111044 H1fxQ80ZM5 188 aa5.68□□□□□ -1.5
Bdnf-204ENSMUST00000111044 Dnal4Q9DCM4 105 aa5.68□□□□□ -1.5
Bdnf-204ENSMUST00000111044 Gm5878E9PUB3 99 aa5.67□□□□□ -1.5
Bdnf-204ENSMUST00000111044 TshbP12656 138 aa5.67□□□□□ -1.5
Bdnf-204ENSMUST00000111044 Map6d1Q14BB9 191 aa5.67□□□□□ -1.5
Bdnf-204ENSMUST00000111044 ScxQ64124 207 aa5.67□□□□□ -1.5
Bdnf-204ENSMUST00000111044 4930415O20RikQ8CDT5 131 aa5.67□□□□□ -1.5
Bdnf-204ENSMUST00000111044 Tmem263Q9DAM7 115 aa5.67□□□□□ -1.5
Bdnf-204ENSMUST00000111044 Wfdc11A2A5H7 82 aa5.67□□□□□ -1.5
Bdnf-204ENSMUST00000111044 1700084M14RikB1AT01 78 aa5.67□□□□□ -1.5
Bdnf-204ENSMUST00000111044 Gm17455G3UW87 128 aa5.67□□□□□ -1.5
Bdnf-204ENSMUST00000111044 Ighv1-62-3P01754 117 aa5.67□□□□□ -1.5
Bdnf-204ENSMUST00000111044 Rpl11Q9CXW4 178 aaKnown RBP5.67□□□□□ -1.5
Bdnf-204ENSMUST00000111044 Hcfc1Q61191 2045 aaKnown RBP5.67□□□□□ -1.5
Bdnf-204ENSMUST00000111044 Ighv1-53A0A075B5W3 117 aa5.67□□□□□ -1.5
Bdnf-204ENSMUST00000111044 Trav14d-3-dv8A0A075B619 120 aa5.67□□□□□ -1.5
Bdnf-204ENSMUST00000111044 Ccl19O70460 108 aa5.67□□□□□ -1.5
Bdnf-204ENSMUST00000111044 P01783 136 aa5.67□□□□□ -1.5
Bdnf-204ENSMUST00000111044 Bub3Q9WVA3 326 aa5.67□□□□□ -1.5
Bdnf-204ENSMUST00000111044 Ighv1-80A0A075B5Y3 117 aa5.66□□□□□ -1.5
Bdnf-204ENSMUST00000111044 Ighv3-4A0A0A6YXF1 117 aa5.66□□□□□ -1.5
Bdnf-204ENSMUST00000111044 Glrp1E9Q9S8 174 aa5.66□□□□□ -1.5
Bdnf-204ENSMUST00000111044 Gata1P17679 413 aa5.66□□□□□ -1.5
Bdnf-204ENSMUST00000111044 Defa21Q8C1P2 93 aa5.66□□□□□ -1.5
Bdnf-204ENSMUST00000111044 HampQ9EQ21 83 aa5.66□□□□□ -1.5
Bdnf-204ENSMUST00000111044 Gm19935A0A1B0GSF9 52 aa5.66□□□□□ -1.5
Bdnf-204ENSMUST00000111044 Lyzl4Q9D925 145 aa5.66□□□□□ -1.5
Bdnf-204ENSMUST00000111044 KalrnA2CG49 2964 aa5.66□□□□□ -1.5
Bdnf-204ENSMUST00000111044 E030018B13RikJ3QMS9 113 aa5.66□□□□□ -1.5
Bdnf-204ENSMUST00000111044 P84751 237 aa5.66□□□□□ -1.5
Bdnf-204ENSMUST00000111044 Trav6-2Q5R1I4 113 aa5.66□□□□□ -1.5
Bdnf-204ENSMUST00000111044 Ighv1-31A0A0A6YWK5 117 aa5.65□□□□□ -1.5
Bdnf-204ENSMUST00000111044 Igkv4-71A0A0G2JEH0 117 aa5.65□□□□□ -1.5
Bdnf-204ENSMUST00000111044 Edn2P22389 175 aa5.65□□□□□ -1.5
Bdnf-204ENSMUST00000111044 Q8R092 253 aa5.65□□□□□ -1.5
Bdnf-204ENSMUST00000111044 Fam216aQ9DB54 251 aa5.65□□□□□ -1.5
Bdnf-204ENSMUST00000111044 Trav11A0A0B4J1J9 114 aa5.65□□□□□ -1.51
Bdnf-204ENSMUST00000111044 Tmem243B2RVB9 118 aa5.65□□□□□ -1.51
Bdnf-204ENSMUST00000111044 Prop1P97458 223 aa5.65□□□□□ -1.51
Bdnf-204ENSMUST00000111044 Znf740Q6NZQ6 180 aa5.65□□□□□ -1.51
Bdnf-204ENSMUST00000111044 SpenQ62504 3644 aaKnown RBP5.65□□□□□ -1.51
Bdnf-204ENSMUST00000111044 Ighv1-5A0A0A6YWG2 117 aa5.65□□□□□ -1.51
Bdnf-204ENSMUST00000111044 Trbv13-1A0A0B4J1P8 112 aa5.65□□□□□ -1.51
Bdnf-204ENSMUST00000111044 GhrhP16043 103 aa5.65□□□□□ -1.51
Bdnf-204ENSMUST00000111044 Pear1Q8VIK5 1034 aa5.65□□□□□ -1.51
Bdnf-204ENSMUST00000111044 CrebbpP45481 2441 aa5.64□□□□□ -1.51
Bdnf-204ENSMUST00000111044 Gm10337F7DEP7 55 aa5.64□□□□□ -1.51
Bdnf-204ENSMUST00000111044 BC025920Q3US60 128 aa5.64□□□□□ -1.51
Bdnf-204ENSMUST00000111044 H2al1aQ5M8Q2 105 aa5.64□□□□□ -1.51
Bdnf-204ENSMUST00000111044 Cfap126Q6P8X9 189 aa5.64□□□□□ -1.51
Bdnf-204ENSMUST00000111044 Abca4O35600 2310 aa5.64□□□□□ -1.51
Bdnf-204ENSMUST00000111044 Akap9Q70FJ1 3797 aa5.64□□□□□ -1.51
Bdnf-204ENSMUST00000111044 Hoxd3P09027 433 aa5.64□□□□□ -1.51
Bdnf-204ENSMUST00000111044 Ccl3P10855 92 aa5.64□□□□□ -1.51
Bdnf-204ENSMUST00000111044 Ovol3D3YYM0 189 aa5.64□□□□□ -1.51
Bdnf-204ENSMUST00000111044 Gm11020F6ZGD5 61 aa5.64□□□□□ -1.51
Bdnf-204ENSMUST00000111044 P18532 116 aa5.64□□□□□ -1.51
Bdnf-204ENSMUST00000111044 Rpl18aP62717 176 aaKnown RBP5.64□□□□□ -1.51
Bdnf-204ENSMUST00000111044 Gm21748Q3UE70 102 aa5.64□□□□□ -1.51
Bdnf-204ENSMUST00000111044 Rmi2Q3UPE3 149 aa5.64□□□□□ -1.51
Bdnf-204ENSMUST00000111044 Zc2hc1bQ9D534 172 aa5.64□□□□□ -1.51
Bdnf-204ENSMUST00000111044 Spry2Q9QXV8 315 aa5.64□□□□□ -1.51
Bdnf-204ENSMUST00000111044 Timm17bQ9Z0V7 172 aa5.64□□□□□ -1.51
Bdnf-204ENSMUST00000111044 SetxA2AKX3 2646 aa5.63□□□□□ -1.51
Bdnf-204ENSMUST00000111044 Gm3285A0A1W2P7U0 201 aa5.63□□□□□ -1.51
Bdnf-204ENSMUST00000111044 A0A1Y7VLE6 161 aa5.63□□□□□ -1.51
Bdnf-204ENSMUST00000111044 MifP34884 115 aaKnown RBP5.63□□□□□ -1.51
Bdnf-204ENSMUST00000111044 Eif4ebp1Q60876 117 aa5.63□□□□□ -1.51
Bdnf-204ENSMUST00000111044 Polr2kQ63871 58 aa5.63□□□□□ -1.51
Bdnf-204ENSMUST00000111044 Ifitm1Q9D103 106 aa5.63□□□□□ -1.51
Bdnf-204ENSMUST00000111044 Defa20Q45VN2 95 aa5.63□□□□□ -1.51
Bdnf-204ENSMUST00000111044 Q4KKZ1 196 aa5.63□□□□□ -1.51
Bdnf-204ENSMUST00000111044 Serp2Q6TAW2 65 aa5.63□□□□□ -1.51
Bdnf-204ENSMUST00000111044 Fam19a5Q91WE9 132 aa5.63□□□□□ -1.51
Bdnf-204ENSMUST00000111044 Qrich2A0A140LIY9 2337 aa5.63□□□□□ -1.51
Bdnf-204ENSMUST00000111044 Igkv20-101-2A0A0G2JDU3 113 aa5.63□□□□□ -1.51
Bdnf-204ENSMUST00000111044 Krtap28-10A0A1Y7VP58 119 aa5.63□□□□□ -1.51
Retrieved 100 of 22,080 RNA–protein pairs in 43.8 ms