RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 Znf672Q99LH4 468 aa11.25□□□□□ -0.61
Pcdha1-201ENSMUST00000070797 Igkv4-78A0A0A6YYE5 119 aa11.24□□□□□ -0.61
Pcdha1-201ENSMUST00000070797 Rpl35aO55142 110 aa11.24□□□□□ -0.61
Pcdha1-201ENSMUST00000070797 Dennd4cA6H8H2 1906 aa11.24□□□□□ -0.61
Pcdha1-201ENSMUST00000070797 Gm5878E9PUB3 99 aa11.24□□□□□ -0.61
Pcdha1-201ENSMUST00000070797 Ighv1-61P01749 117 aa11.23□□□□□ -0.61
Pcdha1-201ENSMUST00000070797 A230072I06RikQ3UUJ8 172 aa11.23□□□□□ -0.61
Pcdha1-201ENSMUST00000070797 Ints1Q6P4S8 2195 aa11.23□□□□□ -0.61
Pcdha1-201ENSMUST00000070797 Serp2Q6TAW2 65 aa11.23□□□□□ -0.61
Pcdha1-201ENSMUST00000070797 Odf3l1Q810P2 275 aa11.23□□□□□ -0.61
Pcdha1-201ENSMUST00000070797 Timm17bQ9Z0V7 172 aa11.23□□□□□ -0.61
Pcdha1-201ENSMUST00000070797 Abca7Q91V24 2159 aa11.23□□□□□ -0.61
Pcdha1-201ENSMUST00000070797 Ighv1-53A0A075B5W3 117 aa11.23□□□□□ -0.61
Pcdha1-201ENSMUST00000070797 Odf1Q61999 247 aa11.23□□□□□ -0.61
Pcdha1-201ENSMUST00000070797 Ighv1-11A0A0A6YWI9 117 aa11.22□□□□□ -0.61
Pcdha1-201ENSMUST00000070797 Ighv3-1A0A075B5S6 116 aa11.22□□□□□ -0.61
Pcdha1-201ENSMUST00000070797 Rnf185Q91YT2 192 aa11.22□□□□□ -0.61
Pcdha1-201ENSMUST00000070797 Anapc1P53995 1944 aaKnown RBP11.22□□□□□ -0.61
Pcdha1-201ENSMUST00000070797 P01753 117 aa11.22□□□□□ -0.61
Pcdha1-201ENSMUST00000070797 Eif4ebp1Q60876 117 aa11.22□□□□□ -0.61
Pcdha1-201ENSMUST00000070797 ArtnQ9Z0L2 224 aa11.22□□□□□ -0.61
Pcdha1-201ENSMUST00000070797 Ighv1-75A0A075B5Y2 117 aa11.21□□□□□ -0.61
Pcdha1-201ENSMUST00000070797 Igkv4-58A0A0G2JGI6 119 aa11.21□□□□□ -0.61
Pcdha1-201ENSMUST00000070797 Spag11Q8K4N2 71 aa11.21□□□□□ -0.61
Pcdha1-201ENSMUST00000070797 Wnk2Q3UH66 2149 aa11.21□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 Igkv4-79A0A075B5L8 119 aa11.21□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 P18527 97 aa11.21□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 Nup210Q9QY81 1886 aaKnown RBP11.21□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 OdaphJ3QNT8 126 aa11.21□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 Gm10251J3QPM5 127 aa11.21□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 Reg3gO09049 174 aa11.21□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 AW146154Q3TPQ7 468 aa11.21□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 Ighv1-12A0A0A6YXJ9 117 aa11.2□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 Shank1D3YZU1 2167 aa11.2□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 A830031A19RikQ8BNT5 113 aa11.2□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 Gm9949Q8C9F4 104 aa11.2□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 Cela2aP05208 271 aa11.2□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 Spata25Q9DA57 226 aa11.2□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 Gm19935A0A1B0GSF9 52 aa11.2□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 Gm5629P06327 117 aa11.2□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 Rpl18aP62717 176 aaKnown RBP11.2□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 Sp5Q9JHX2 398 aa11.19□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 Trav13n-1A0A0G2JEU8 110 aa11.19□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 ColqO35348 457 aa11.19□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 Ndufs7Q9DC70 224 aa11.19□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 Trip12G5E870 2025 aaKnown RBP11.19□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 Pla2g2eQ9QUL3 142 aa11.18□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 Dock10Q8BZN6 2150 aa11.18□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 AcacaQ5SWU9 2345 aa11.18□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 Q99M08 65 aa11.18□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 Psmb8P28063 276 aa11.18□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 Smr3aQ61900 147 aa11.17□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 Edn3P48299 214 aa11.17□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 Dph3Q8K0W9 82 aa11.17□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 Trav13d-1A0A075B606 110 aa11.17□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 Ighv5-8A0A075B676 92 aa11.17□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 CnfnQ6PCW6 111 aa11.17□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 CstadQ9D245 104 aa11.17□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 Pkd1l3Q2EG98 2201 aa11.17□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 Wfdc15bQ9JHY4 80 aa11.17□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 Col4a6B1AVK5 1691 aa11.17□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 Igkv1-35A0A0G2JDE5 120 aa11.16□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 Q9D8Q6 235 aa11.16□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 Erdr1J3QMM0 206 aa11.16□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 Gm9958Q8C9U4 106 aa11.16□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 Znf239P24399 201 aa11.15□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 Sptbn2Q68FG2 2388 aa11.15□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 Gm9970F6ZED4 185 aa11.15□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 Ahctf1Q8CJF7 2243 aaKnown RBP11.15□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 Cacna1hO88427 2365 aa11.15□□□□□ -0.62
Pcdha1-201ENSMUST00000070797 Igkv4-74A0A0B4J1I3 119 aa11.14□□□□□ -0.63
Pcdha1-201ENSMUST00000070797 Wipf1Q8K1I7 493 aa11.14□□□□□ -0.63
Pcdha1-201ENSMUST00000070797 Pi4kaE9Q3L2 2105 aa11.14□□□□□ -0.63
Pcdha1-201ENSMUST00000070797 Igkv3-2A0A075B5P0 119 aa11.14□□□□□ -0.63
Pcdha1-201ENSMUST00000070797 C1qcQ02105 246 aa11.14□□□□□ -0.63
Pcdha1-201ENSMUST00000070797 Dnajc13D4AFX7 2248 aaKnown RBP11.14□□□□□ -0.63
Pcdha1-201ENSMUST00000070797 Klk5Q9D140 293 aa11.14□□□□□ -0.63
Pcdha1-201ENSMUST00000070797 GfyJ3KML8 504 aa11.13□□□□□ -0.63
Pcdha1-201ENSMUST00000070797 Leap2Q91V13 76 aa11.13□□□□□ -0.63
Pcdha1-201ENSMUST00000070797 Pglyrp1O88593 182 aa11.13□□□□□ -0.63
Pcdha1-201ENSMUST00000070797 P06328 117 aa11.13□□□□□ -0.63
Pcdha1-201ENSMUST00000070797 Spry4Q9WTP2 300 aa11.13□□□□□ -0.63
Pcdha1-201ENSMUST00000070797 Cacna1gQ5SUF7 2381 aa11.13□□□□□ -0.63
Pcdha1-201ENSMUST00000070797 Tmem223Q9CQE2 199 aaKnown RBP11.13□□□□□ -0.63
Pcdha1-201ENSMUST00000070797 Rai1Q61818 1889 aa11.12□□□□□ -0.63
Pcdha1-201ENSMUST00000070797 Cacna1eQ61290 2272 aa11.12□□□□□ -0.63
Pcdha1-201ENSMUST00000070797 Ighv1-85A0A075B5Y6 117 aa11.12□□□□□ -0.63
Pcdha1-201ENSMUST00000070797 Gm17472A0A075B683 117 aa11.12□□□□□ -0.63
Pcdha1-201ENSMUST00000070797 Ucn2Q99ML8 113 aa11.12□□□□□ -0.63
Pcdha1-201ENSMUST00000070797 Ighv2-6-8A0A0A6YWY9 116 aa11.12□□□□□ -0.63
Pcdha1-201ENSMUST00000070797 Ptprz1B9EKR1 2312 aa11.11□□□□□ -0.63
Pcdha1-201ENSMUST00000070797 Igkv2-109A0A075B5K6 120 aa11.11□□□□□ -0.63
Pcdha1-201ENSMUST00000070797 Dad1P61804 113 aa11.11□□□□□ -0.63
Pcdha1-201ENSMUST00000070797 Cnot1Q6ZQ08 2375 aaKnown RBP11.11□□□□□ -0.63
Pcdha1-201ENSMUST00000070797 TncQ80YX1 2110 aa11.11□□□□□ -0.63
Pcdha1-201ENSMUST00000070797 Gtf3c1Q8K284 2101 aa11.11□□□□□ -0.63
Pcdha1-201ENSMUST00000070797 Gm12689Q8BQU9 117 aa11.11□□□□□ -0.63
Pcdha1-201ENSMUST00000070797 Gm12353A2AGJ4 60 aa11.11□□□□□ -0.63
Pcdha1-201ENSMUST00000070797 Rpl39lQ9CQD0 51 aa11.11□□□□□ -0.63
Pcdha1-201ENSMUST00000070797 Tcl1b3P56842 122 aa11.1□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 78.4 ms