RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Gm17455G3UW87 128 aa11.95□□□□□ -0.5
Ckap4-201ENSMUST00000053871 Snrpd3P62320 126 aaKnown RBP11.95□□□□□ -0.5
Ckap4-201ENSMUST00000053871 Dynlrb2Q9DAJ5 96 aa11.95□□□□□ -0.5
Ckap4-201ENSMUST00000053871 FlnaQ8BTM8 2647 aaKnown RBP11.94□□□□□ -0.5
Ckap4-201ENSMUST00000053871 Hivep2Q3UHF7 2430 aa11.94□□□□□ -0.5
Ckap4-201ENSMUST00000053871 Ighv14-1A0A075B5R4 117 aa11.94□□□□□ -0.5
Ckap4-201ENSMUST00000053871 Igkv4-69A0A0B4J1I6 116 aa11.94□□□□□ -0.5
Ckap4-201ENSMUST00000053871 P01812 117 aa11.94□□□□□ -0.5
Ckap4-201ENSMUST00000053871 PolP10400 120 aa11.94□□□□□ -0.5
Ckap4-201ENSMUST00000053871 Rpl24Q8BP67 157 aaKnown RBP11.94□□□□□ -0.5
Ckap4-201ENSMUST00000053871 Dppa2Q9CWH0 301 aa11.94□□□□□ -0.5
Ckap4-201ENSMUST00000053871 Fam222aQ6PGH4 453 aa11.94□□□□□ -0.5
Ckap4-201ENSMUST00000053871 Pradc1Q9D9N8 188 aa11.94□□□□□ -0.5
Ckap4-201ENSMUST00000053871 Hbb-bsA8DUK4 147 aa11.93□□□□□ -0.5
Ckap4-201ENSMUST00000053871 Gm42674D3YUT9 64 aa11.93□□□□□ -0.5
Ckap4-201ENSMUST00000053871 Hbb-b1P02088 147 aa11.93□□□□□ -0.5
Ckap4-201ENSMUST00000053871 Pxt1Q8K459 51 aa11.93□□□□□ -0.5
Ckap4-201ENSMUST00000053871 Gm1553Q66VB7 94 aa11.92□□□□□ -0.5
Ckap4-201ENSMUST00000053871 Atxn7l1Q9CZ05 146 aa11.92□□□□□ -0.5
Ckap4-201ENSMUST00000053871 Iah1Q9DB29 249 aa11.92□□□□□ -0.5
Ckap4-201ENSMUST00000053871 Clec5aQ9R007 190 aa11.92□□□□□ -0.5
Ckap4-201ENSMUST00000053871 Ighv1-52A0A0A6YXC3 117 aa11.92□□□□□ -0.5
Ckap4-201ENSMUST00000053871 1810032O08RikE9PZV8 113 aa11.92□□□□□ -0.5
Ckap4-201ENSMUST00000053871 Tcrg-C3L7N479 172 aa11.92□□□□□ -0.5
Ckap4-201ENSMUST00000053871 P03985 172 aa11.92□□□□□ -0.5
Ckap4-201ENSMUST00000053871 Gm5464Q3UY29 175 aa11.92□□□□□ -0.5
Ckap4-201ENSMUST00000053871 Ighv2-3A0A075B696 115 aa11.91□□□□□ -0.5
Ckap4-201ENSMUST00000053871 Odf3Q920N1 254 aa11.91□□□□□ -0.5
Ckap4-201ENSMUST00000053871 Gm17732E9Q5I2 61 aa11.91□□□□□ -0.5
Ckap4-201ENSMUST00000053871 Gm26602M0QWA4 95 aa11.91□□□□□ -0.5
Ckap4-201ENSMUST00000053871 Ankrd17Q99NH0 2603 aaKnown RBP11.91□□□□□ -0.5
Ckap4-201ENSMUST00000053871 Q5BN45 167 aa11.9□□□□□ -0.5
Ckap4-201ENSMUST00000053871 Chac1Q8R3J5 223 aa11.9□□□□□ -0.5
Ckap4-201ENSMUST00000053871 Plac1Q9JI83 173 aa11.9□□□□□ -0.5
Ckap4-201ENSMUST00000053871 Gm21370Q3T9V6 190 aa11.9□□□□□ -0.5
Ckap4-201ENSMUST00000053871 Ccl24Q9JKC0 119 aa11.9□□□□□ -0.5
Ckap4-201ENSMUST00000053871 Hoxd3P09027 433 aa11.9□□□□□ -0.51
Ckap4-201ENSMUST00000053871 Defa3P28310 93 aa11.89□□□□□ -0.51
Ckap4-201ENSMUST00000053871 Defa10P50708 93 aa11.89□□□□□ -0.51
Ckap4-201ENSMUST00000053871 Defa15P50713 93 aa11.89□□□□□ -0.51
Ckap4-201ENSMUST00000053871 1500011B03RikQ3TTH7 73 aa11.89□□□□□ -0.51
Ckap4-201ENSMUST00000053871 Prss29Q99MS4 279 aa11.88□□□□□ -0.51
Ckap4-201ENSMUST00000053871 Brwd1Q921C3 2304 aa11.88□□□□□ -0.51
Ckap4-201ENSMUST00000053871 Pdzd2E9Q1M1 2796 aa11.88□□□□□ -0.51
Ckap4-201ENSMUST00000053871 Lgals6O54891 301 aa11.88□□□□□ -0.51
Ckap4-201ENSMUST00000053871 P01753 117 aa11.88□□□□□ -0.51
Ckap4-201ENSMUST00000053871 P01837 106 aa11.88□□□□□ -0.51
Ckap4-201ENSMUST00000053871 Iglc1A0A0G2JE99 106 aa11.88□□□□□ -0.51
Ckap4-201ENSMUST00000053871 OdaphJ3QNT8 126 aa11.88□□□□□ -0.51
Ckap4-201ENSMUST00000053871 P01843 105 aa11.88□□□□□ -0.51
Ckap4-201ENSMUST00000053871 Gphb5Q812B2 130 aa11.88□□□□□ -0.51
Ckap4-201ENSMUST00000053871 Rbmxl2Q9DAE2 385 aaKnown RBP11.88□□□□□ -0.51
Ckap4-201ENSMUST00000053871 Gm2564F6Z9S8 108 aa11.87□□□□□ -0.51
Ckap4-201ENSMUST00000053871 Defa37K9J724 93 aa11.87□□□□□ -0.51
Ckap4-201ENSMUST00000053871 Defa5P28312 93 aa11.87□□□□□ -0.51
Ckap4-201ENSMUST00000053871 Try10Q792Z1 246 aaKnown RBP11.87□□□□□ -0.51
Ckap4-201ENSMUST00000053871 Avpi1Q9D7H4 142 aa11.87□□□□□ -0.51
Ckap4-201ENSMUST00000053871 Ndufs7Q9DC70 224 aa11.87□□□□□ -0.51
Ckap4-201ENSMUST00000053871 Rpl36-ps4A0A140T8U4 117 aa11.87□□□□□ -0.51
Ckap4-201ENSMUST00000053871 BatfO35284 125 aa11.87□□□□□ -0.51
Ckap4-201ENSMUST00000053871 F11rO88792 300 aa11.87□□□□□ -0.51
Ckap4-201ENSMUST00000053871 P01741 114 aa11.87□□□□□ -0.51
Ckap4-201ENSMUST00000053871 Tal2Q62282 108 aa11.87□□□□□ -0.51
Ckap4-201ENSMUST00000053871 Gm14137Q8CE97 175 aa11.87□□□□□ -0.51
Ckap4-201ENSMUST00000053871 Smim1P0C8K7 78 aa11.86□□□□□ -0.51
Ckap4-201ENSMUST00000053871 Foxi2Q3I5G5 311 aa11.86□□□□□ -0.51
Ckap4-201ENSMUST00000053871 Unc79Q0KK59 2596 aa11.86□□□□□ -0.51
Ckap4-201ENSMUST00000053871 Ccl21aP84444 133 aa11.86□□□□□ -0.51
Ckap4-201ENSMUST00000053871 Ccl21bP86792 133 aa11.86□□□□□ -0.51
Ckap4-201ENSMUST00000053871 Ccl21cP86793 133 aa11.86□□□□□ -0.51
Ckap4-201ENSMUST00000053871 Lyzl4Q9D925 145 aa11.86□□□□□ -0.51
Ckap4-201ENSMUST00000053871 Zfp462B1AWL2 2495 aaKnown RBP11.86□□□□□ -0.51
Ckap4-201ENSMUST00000053871 Polr2kQ63871 58 aa11.85□□□□□ -0.51
Ckap4-201ENSMUST00000053871 Usp9yF8VPU6 2556 aa11.85□□□□□ -0.51
Ckap4-201ENSMUST00000053871 Igkv4-62A0A0G2JDW9 117 aa11.85□□□□□ -0.51
Ckap4-201ENSMUST00000053871 SrarpQ3ULG3 163 aa11.85□□□□□ -0.51
Ckap4-201ENSMUST00000053871 Defa24Q5G865 93 aa11.85□□□□□ -0.51
Ckap4-201ENSMUST00000053871 Ss18Q62280 418 aa11.85□□□□□ -0.51
Ckap4-201ENSMUST00000053871 Ighv12-3A0A075B5T1 117 aa11.85□□□□□ -0.51
Ckap4-201ENSMUST00000053871 Reg3gO09049 174 aa11.85□□□□□ -0.51
Ckap4-201ENSMUST00000053871 Synj2bpQ9D6K5 145 aa11.85□□□□□ -0.51
Ckap4-201ENSMUST00000053871 Hint1P70349 126 aaKnown RBP11.84□□□□□ -0.51
Ckap4-201ENSMUST00000053871 Epg5Q80TA9 2572 aa11.84□□□□□ -0.51
Ckap4-201ENSMUST00000053871 Klhdc1Q80YG3 406 aa11.84□□□□□ -0.51
Ckap4-201ENSMUST00000053871 CubnQ9JLB4 3623 aa11.84□□□□□ -0.51
Ckap4-201ENSMUST00000053871 Esp24A8R0V6 68 aa11.84□□□□□ -0.51
Ckap4-201ENSMUST00000053871 Gm20499D3Z4G5 72 aa11.84□□□□□ -0.51
Ckap4-201ENSMUST00000053871 Vamp8O70404 101 aa11.83□□□□□ -0.52
Ckap4-201ENSMUST00000053871 Gata3P23772 443 aa11.83□□□□□ -0.52
Ckap4-201ENSMUST00000053871 Bri3P28662 125 aa11.83□□□□□ -0.52
Ckap4-201ENSMUST00000053871 Ighv1-66A0A075B5X5 117 aa11.83□□□□□ -0.52
Ckap4-201ENSMUST00000053871 Slamf6Q9ET39 351 aa11.83□□□□□ -0.52
Ckap4-201ENSMUST00000053871 Nat8b-psE0CYC6 232 aa11.83□□□□□ -0.52
Ckap4-201ENSMUST00000053871 A930009A15RikG3UYI6 118 aa11.83□□□□□ -0.52
Ckap4-201ENSMUST00000053871 Srsf9Q9D0B0 222 aaKnown RBP11.83□□□□□ -0.52
Ckap4-201ENSMUST00000053871 Pgpep1Q9ESW8 209 aa11.83□□□□□ -0.52
Ckap4-201ENSMUST00000053871 Gm9513B3GLJ6 99 aa11.82□□□□□ -0.52
Ckap4-201ENSMUST00000053871 FcorP0DJI6 106 aa11.82□□□□□ -0.52
Ckap4-201ENSMUST00000053871 Spink13Q3UTS8 97 aa11.82□□□□□ -0.52
Ckap4-201ENSMUST00000053871 Mapk1ip1lQ8BH93 242 aa11.82□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 50.1 ms