RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 P01726 129 aa7.34□□□□□ -1.23
Ccdc40-202ENSMUST00000053440 Hoxd3P09027 433 aa7.34□□□□□ -1.23
Ccdc40-202ENSMUST00000053440 C1qcQ02105 246 aa7.34□□□□□ -1.23
Ccdc40-202ENSMUST00000053440 Klk5Q9D140 293 aa7.34□□□□□ -1.23
Ccdc40-202ENSMUST00000053440 Abca12E9Q876 2595 aa7.34□□□□□ -1.23
Ccdc40-202ENSMUST00000053440 Gm10553J3QPF1 123 aa7.34□□□□□ -1.23
Ccdc40-202ENSMUST00000053440 P01812 117 aa7.34□□□□□ -1.23
Ccdc40-202ENSMUST00000053440 Defb45Q3V490 66 aa7.34□□□□□ -1.23
Ccdc40-202ENSMUST00000053440 Q5BN45 167 aa7.34□□□□□ -1.23
Ccdc40-202ENSMUST00000053440 Samd10Q7TST3 202 aa7.34□□□□□ -1.23
Ccdc40-202ENSMUST00000053440 Klk7Q91VE3 249 aa7.34□□□□□ -1.23
Ccdc40-202ENSMUST00000053440 AY761184Q9D848 116 aa7.34□□□□□ -1.23
Ccdc40-202ENSMUST00000053440 Ighv1-64A0A075B5X3 117 aa7.34□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 P01643 108 aa7.34□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Mllt11P97783 90 aa7.34□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Usp9xP70398 2559 aaKnown RBP7.33□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Nav3Q80TN7 2359 aa7.33□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Ighv1-50A0A075B5W1 117 aa7.33□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Ighv1-75A0A075B5Y2 117 aa7.33□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Gm45785A0A1B0GT05 94 aa7.33□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Ovol2Q8CIV7 274 aa7.33□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 FlncQ8VHX6 2726 aaKnown RBP7.33□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Bahcc1Q3UHR0 2643 aa7.33□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Ighv3-3A0A0A6YWL2 116 aa7.33□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Gm2564F6Z9S8 108 aa7.33□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Lgals6O54891 301 aa7.33□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Pla2g2cP48076 150 aa7.33□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Pcp4P63054 62 aa7.33□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Triap1Q9D8Z2 76 aa7.33□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Celsr2Q9R0M0 2920 aa7.33□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Gm10295Q8CCF3 114 aa7.32□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Spink12Q9D256 87 aa7.32□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Rpl36-ps4A0A140T8U4 117 aa7.32□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Tspan13Q9D8C2 204 aa7.32□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Q9D8Q6 235 aa7.32□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Nbeal1E9PYP2 2688 aa7.32□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Nat8b-psE0CYC6 232 aa7.32□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 F11rO88792 300 aa7.32□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Fam222aQ6PGH4 453 aa7.32□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Gm9961Q8BNV2 113 aa7.32□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Iah1Q9DB29 249 aa7.32□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Cysltr1Q99JA4 352 aa7.31□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Rab37Q9JKM7 223 aa7.31□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Ighv14-1A0A075B5R4 117 aa7.31□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Ighv12-3A0A075B5T1 117 aa7.31□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Ndufb4Q9CQC7 129 aa7.31□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Chd9Q8BYH8 2885 aa7.3□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Gm29666A0A087WQ99 126 aa7.3□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Ighv1-12A0A0A6YXJ9 117 aa7.3□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Gm35549A0A0N4SUS7 141 aa7.3□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Sprr3O09116 238 aa7.3□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 PlaurP35456 327 aa7.3□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 NrgnP60761 78 aa7.3□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Runx1Q03347 451 aa7.3□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Polr2kQ63871 58 aa7.3□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Gemin7Q9CWY4 129 aa7.3□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Wnk1P83741 2377 aa7.3□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Ighv8-12A0A0G2JDE1 119 aa7.3□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Gm5819E9PZ96 154 aa7.3□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Gm17732E9Q5I2 61 aa7.3□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 P01811 117 aa7.3□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 P04219 140 aa7.3□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 1500011B03RikQ3TTH7 73 aa7.3□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Trav2Q5R1I9 109 aa7.3□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Usmg5Q78IK2 58 aa7.3□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Gphb5Q812B2 130 aa7.3□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Lyzl4Q9D925 145 aa7.3□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Dpm2Q9Z324 84 aa7.3□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Gm45717A0A1B0GT68 152 aa7.29□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 BC106179Q8C9L1 186 aa7.29□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 CckP09240 115 aa7.29□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Ube2d1P61080 147 aaKnown RBP7.29□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 2310009B15RikA0A0A6YWI4 143 aa7.28□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Igkv4-69A0A0B4J1I6 116 aa7.28□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 C920008G01RikA0A0B4J1N1 112 aa7.28□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 FcorP0DJI6 106 aa7.28□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Pla2g2aP31482 146 aa7.28□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Atp6v0bQ91V37 205 aa7.28□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Clec5aQ9R007 190 aa7.28□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Esp24A8R0V6 68 aa7.28□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Trav3-1Q5R1I8 114 aa7.28□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 OdaphJ3QNT8 126 aa7.28□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Wfdc15aQ8BH89 80 aa7.28□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Ankrd39Q9D2X0 183 aa7.28□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Higd1aQ9JLR9 95 aa7.28□□□□□ -1.24
Ccdc40-202ENSMUST00000053440 Gm21748Q3UE70 102 aa7.27□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Zc2hc1bQ9D534 172 aa7.27□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Ighv1-66A0A075B5X5 117 aa7.27□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Cox8cA6H666 72 aa7.27□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Rpl13aP19253 203 aaKnown RBP7.27□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 4930596D02RikQ3V0H9 216 aa7.27□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Spata45Q9CVW4 97 aa7.27□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 OtogO55225 2910 aa7.27□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Trav9-2A0A075B647 113 aa7.27□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Trav9-4A0A0B4J1K2 113 aa7.27□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 BC025920Q3US60 128 aa7.27□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Gm6812B1AXU1 112 aa7.26□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Ndufs7Q9DC70 224 aa7.26□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Klhdc1Q80YG3 406 aa7.26□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Gm20499D3Z4G5 72 aa7.26□□□□□ -1.25
Retrieved 100 of 22,080 RNA–protein pairs in 32.8 ms