RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 TctaQ8VEA7 122 aa16.89■□□□□ 0.29
Upf3a-201ENSMUST00000043767 Ighv6-7A0A0A6YWU3 119 aa16.89■□□□□ 0.29
Upf3a-201ENSMUST00000043767 Gm7075D3Z497 112 aa16.89■□□□□ 0.29
Upf3a-201ENSMUST00000043767 Gm28038F7BCN9 126 aa16.89■□□□□ 0.29
Upf3a-201ENSMUST00000043767 Dkk2Q9QYZ8 259 aa16.89■□□□□ 0.29
Upf3a-201ENSMUST00000043767 S100a8P27005 89 aa16.88■□□□□ 0.29
Upf3a-201ENSMUST00000043767 Defa9P50707 93 aa16.88■□□□□ 0.29
Upf3a-201ENSMUST00000043767 Fxyd7P59648 80 aa16.88■□□□□ 0.29
Upf3a-201ENSMUST00000043767 Q3UNZ8 350 aa16.88■□□□□ 0.29
Upf3a-201ENSMUST00000043767 Gnb1lQ9EQ15 326 aa16.87■□□□□ 0.29
Upf3a-201ENSMUST00000043767 Psmb11Q8BG41 302 aa16.87■□□□□ 0.29
Upf3a-201ENSMUST00000043767 Ociad2Q9D8W7 154 aa16.87■□□□□ 0.29
Upf3a-201ENSMUST00000043767 Trav16d-dv11A0A075B617 117 aa16.86■□□□□ 0.29
Upf3a-201ENSMUST00000043767 NpbQ8K4P1 119 aa16.86■□□□□ 0.29
Upf3a-201ENSMUST00000043767 Gm26938S4R185 226 aa16.86■□□□□ 0.29
Upf3a-201ENSMUST00000043767 Gm29666A0A087WQ99 126 aa16.85■□□□□ 0.29
Upf3a-201ENSMUST00000043767 Trav19A0A0B4J1K4 119 aa16.85■□□□□ 0.29
Upf3a-201ENSMUST00000043767 Gm10300Q8C8P7 189 aa16.85■□□□□ 0.29
Upf3a-201ENSMUST00000043767 Gm7489Q3UT34 171 aa16.85■□□□□ 0.29
Upf3a-201ENSMUST00000043767 Nit2Q9JHW2 276 aa16.85■□□□□ 0.29
Upf3a-201ENSMUST00000043767 Mtatp8P03930 67 aa16.84■□□□□ 0.29
Upf3a-201ENSMUST00000043767 Gpr82Q8BZR0 328 aa16.84■□□□□ 0.29
Upf3a-201ENSMUST00000043767 Gtf2h5Q8K2X8 71 aa16.84■□□□□ 0.29
Upf3a-201ENSMUST00000043767 Klk7Q91VE3 249 aa16.84■□□□□ 0.29
Upf3a-201ENSMUST00000043767 RhohQ9D3G9 191 aa16.84■□□□□ 0.29
Upf3a-201ENSMUST00000043767 Esp3J3QN49 87 aa16.84■□□□□ 0.29
Upf3a-201ENSMUST00000043767 Gm17359A0A0G2JEB7 487 aa16.83■□□□□ 0.28
Upf3a-201ENSMUST00000043767 Gm12845A0A0N4SUM5 588 aa16.83■□□□□ 0.28
Upf3a-201ENSMUST00000043767 Fam240bJ3QMB3 78 aa16.83■□□□□ 0.28
Upf3a-201ENSMUST00000043767 Cd24P24807 76 aa16.83■□□□□ 0.28
Upf3a-201ENSMUST00000043767 Igkv4-62A0A0G2JDW9 117 aa16.82■□□□□ 0.28
Upf3a-201ENSMUST00000043767 Gm26602M0QWA4 95 aa16.82■□□□□ 0.28
Upf3a-201ENSMUST00000043767 Olfr322Q5NCC8 327 aa16.82■□□□□ 0.28
Upf3a-201ENSMUST00000043767 4930564D02RikQ9D4S4 103 aa16.82■□□□□ 0.28
Upf3a-201ENSMUST00000043767 PolqQ8CGS6 2544 aa16.82■□□□□ 0.28
Upf3a-201ENSMUST00000043767 Col6a5A6H584 2640 aa16.82■□□□□ 0.28
Upf3a-201ENSMUST00000043767 Thy1P01831 162 aa16.82■□□□□ 0.28
Upf3a-201ENSMUST00000043767 Htr1dQ61224 374 aa16.82■□□□□ 0.28
Upf3a-201ENSMUST00000043767 Klk15Q8CGR4 254 aa16.82■□□□□ 0.28
Upf3a-201ENSMUST00000043767 Ndufb4Q9CQC7 129 aa16.82■□□□□ 0.28
Upf3a-201ENSMUST00000043767 Cd164l2Q9D6W7 172 aa16.82■□□□□ 0.28
Upf3a-201ENSMUST00000043767 P06330 118 aa16.81■□□□□ 0.28
Upf3a-201ENSMUST00000043767 Gpx1P11352 201 aa16.81■□□□□ 0.28
Upf3a-201ENSMUST00000043767 Defb10Q8R2I8 73 aa16.81■□□□□ 0.28
Upf3a-201ENSMUST00000043767 Gpx7Q99LJ6 186 aa16.81■□□□□ 0.28
Upf3a-201ENSMUST00000043767 Dppa2Q9CWH0 301 aa16.81■□□□□ 0.28
Upf3a-201ENSMUST00000043767 Notch3Q61982 2318 aa16.81■□□□□ 0.28
Upf3a-201ENSMUST00000043767 Tcl1b4P56844 120 aa16.81■□□□□ 0.28
Upf3a-201ENSMUST00000043767 Chac1Q8R3J5 223 aa16.81■□□□□ 0.28
Upf3a-201ENSMUST00000043767 Hivep3A2A884 2348 aa16.8■□□□□ 0.28
Upf3a-201ENSMUST00000043767 AngP21570 145 aa16.8■□□□□ 0.28
Upf3a-201ENSMUST00000043767 Wfdc17Q5SSJ1 76 aa16.8■□□□□ 0.28
Upf3a-201ENSMUST00000043767 Bak1O08734 209 aa16.79■□□□□ 0.28
Upf3a-201ENSMUST00000043767 P06334 169 aa16.79■□□□□ 0.28
Upf3a-201ENSMUST00000043767 Wfdc21Q8BTE6 63 aa16.79■□□□□ 0.28
Upf3a-201ENSMUST00000043767 Erg28Q9ERY9 140 aa16.79■□□□□ 0.28
Upf3a-201ENSMUST00000043767 Fgf6P21658 208 aa16.79■□□□□ 0.28
Upf3a-201ENSMUST00000043767 LbhQ9CX60 105 aa16.79■□□□□ 0.28
Upf3a-201ENSMUST00000043767 Hbb-bsA8DUK4 147 aa16.78■□□□□ 0.28
Upf3a-201ENSMUST00000043767 Hbb-b1P02088 147 aa16.78■□□□□ 0.28
Upf3a-201ENSMUST00000043767 Slc16a4Q8R0M8 500 aa16.78■□□□□ 0.28
Upf3a-201ENSMUST00000043767 Tmem97Q8VD00 176 aa16.78■□□□□ 0.28
Upf3a-201ENSMUST00000043767 Cby1Q9D1C2 127 aa16.78■□□□□ 0.28
Upf3a-201ENSMUST00000043767 4930470P17RikQ9D542 155 aa16.78■□□□□ 0.28
Upf3a-201ENSMUST00000043767 P01747 120 aa16.77■□□□□ 0.28
Upf3a-201ENSMUST00000043767 Snai3Q9QY31 287 aa16.77■□□□□ 0.28
Upf3a-201ENSMUST00000043767 Notch2O35516 2470 aa16.77■□□□□ 0.28
Upf3a-201ENSMUST00000043767 Sertad4A7DTG3 377 aa16.77■□□□□ 0.27
Upf3a-201ENSMUST00000043767 Cox7cP17665 63 aa16.77■□□□□ 0.27
Upf3a-201ENSMUST00000043767 Synj2bpQ9D6K5 145 aa16.77■□□□□ 0.27
Upf3a-201ENSMUST00000043767 Cox11Q6P8I6 275 aa16.76■□□□□ 0.27
Upf3a-201ENSMUST00000043767 Brwd1Q921C3 2304 aa16.75■□□□□ 0.27
Upf3a-201ENSMUST00000043767 Tal2Q62282 108 aa16.75■□□□□ 0.27
Upf3a-201ENSMUST00000043767 Arhgap32Q811P8 2089 aa16.74■□□□□ 0.27
Upf3a-201ENSMUST00000043767 Defa13P50711 93 aa16.74■□□□□ 0.27
Upf3a-201ENSMUST00000043767 Cdx4Q07424 282 aa16.74■□□□□ 0.27
Upf3a-201ENSMUST00000043767 Gm36176A0A1W2P8D5 158 aa16.74■□□□□ 0.27
Upf3a-201ENSMUST00000043767 SbpP15501 199 aa16.74■□□□□ 0.27
Upf3a-201ENSMUST00000043767 AI854703Q8BIN3 203 aa16.74■□□□□ 0.27
Upf3a-201ENSMUST00000043767 Il19Q8CJ70 176 aa16.74■□□□□ 0.27
Upf3a-201ENSMUST00000043767 Lypd5Q9D7Z7 256 aa16.74■□□□□ 0.27
Upf3a-201ENSMUST00000043767 Ighv3-3A0A0A6YWL2 116 aa16.73■□□□□ 0.27
Upf3a-201ENSMUST00000043767 Gm9242J3QNY1 357 aa16.73■□□□□ 0.27
Upf3a-201ENSMUST00000043767 Ndufa1O35683 70 aa16.73■□□□□ 0.27
Upf3a-201ENSMUST00000043767 Smr3aQ61900 147 aa16.73■□□□□ 0.27
Upf3a-201ENSMUST00000043767 Tm4sf20Q9CQY8 226 aa16.73■□□□□ 0.27
Upf3a-201ENSMUST00000043767 Ighv1-75A0A075B5Y2 117 aa16.72■□□□□ 0.27
Upf3a-201ENSMUST00000043767 4930447F04RikA2AFR2 126 aa16.72■□□□□ 0.27
Upf3a-201ENSMUST00000043767 H2al2bA9Z055 111 aa16.72■□□□□ 0.27
Upf3a-201ENSMUST00000043767 PrlhG3UWC3 86 aa16.72■□□□□ 0.27
Upf3a-201ENSMUST00000043767 Ins1P01325 108 aa16.72■□□□□ 0.27
Upf3a-201ENSMUST00000043767 P01741 114 aa16.72■□□□□ 0.27
Upf3a-201ENSMUST00000043767 MturnQ8CGA4 131 aa16.72■□□□□ 0.27
Upf3a-201ENSMUST00000043767 P01786 117 aa16.71■□□□□ 0.27
Upf3a-201ENSMUST00000043767 Bsph2Q0Q236 131 aa16.71■□□□□ 0.27
Upf3a-201ENSMUST00000043767 Ighv1-63A0A075B5X2 117 aa16.71■□□□□ 0.27
Upf3a-201ENSMUST00000043767 Prr3Q811B5 190 aaKnown RBP16.71■□□□□ 0.27
Upf3a-201ENSMUST00000043767 Gm12888Q3UW77 119 aa16.69■□□□□ 0.26
Upf3a-201ENSMUST00000043767 Tmem14cQ9CQN6 114 aa16.69■□□□□ 0.26
Upf3a-201ENSMUST00000043767 Esp4A8R0T8 117 aa16.69■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 59.7 ms