RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Ighv12-3A0A075B5T1 117 aa7.1□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Ighv13-2A0A0A6YWN3 119 aa7.1□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Mapk1ip1lQ8BH93 242 aa7.1□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Ucn2Q99ML8 113 aa7.1□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Gvin1Q80SU7 2427 aa7.09□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Vpreb3D3Z6J4 130 aa7.09□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Gm10735Q3US96 136 aa7.09□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Thsd7bQ6P4U0 1607 aa7.09□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Trav9d-3A0A075B695 113 aa7.09□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Gm37389A0A0A6YW05 95 aa7.09□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Igkv1-122A0A140T8M9 119 aa7.09□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Gm10518F6UQQ9 182 aa7.09□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Fgf6P21658 208 aa7.09□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Sec61gP60060 68 aa7.09□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Fam19a4Q7TPG5 135 aa7.09□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 PpbpQ9EQI5 113 aa7.09□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Arid2E9Q7E2 1828 aa7.09□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Casp8ap2Q9WUF3 1962 aa7.09□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 IgipA0A1B0GR74 53 aa7.09□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 P0C913 63 aa7.09□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 PrcdQ00LT2 53 aa7.09□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 ThadaA8C756 1938 aa7.09□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Wdr81Q5ND34 1934 aa7.08□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Gm17455G3UW87 128 aa7.08□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Tax1bp3Q9DBG9 124 aa7.08□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Crybg1A0A0G2JG52 2065 aa7.08□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Gm10638F6QEG2 257 aa7.08□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Gm15093A2BI72 449 aa7.08□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Nsun4C4P6S0 806 aaKnown RBP7.08□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Gm15085Q62012 449 aa7.08□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Trav9n-2A0A0G2JDP3 113 aa7.07□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 P01643 108 aa7.07□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Q8K1L6 76 aa7.07□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Mlst8Q9DCJ1 326 aa7.07□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 RlfA2A7F4 1918 aa7.07□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 SonQ9QX47 2444 aaKnown RBP7.07□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Gm20730A0A075B5J6 119 aa7.07□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Ccdc179J3QM76 67 aa7.07□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 C920008G01RikA0A0B4J1N1 112 aa7.07□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Gm15128A2ADW8 449 aa7.07□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Luzp4B1AV09 449 aa7.07□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Gm15107B1B0X0 449 aa7.07□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Gm15097E9QA14 449 aa7.07□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Defb47Q30KN1 79 aa7.07□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Ndufa4l2Q4FZG9 87 aa7.07□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Dennd4aE9Q8V6 1869 aa7.07□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Gm10251J3QPM5 127 aa7.07□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Gphb5Q812B2 130 aa7.07□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Plxnb1Q8CJH3 2119 aa7.07□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Gm2916Q9D9B9 127 aa7.07□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Gm21060J3KMU4 56 aa7.06□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Gm26602M0QWA4 95 aa7.06□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Spata25Q9DA57 226 aa7.06□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Plxnd1Q3UH93 1925 aa7.06□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Trav9-2A0A075B647 113 aa7.06□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Trav9-4A0A0B4J1K2 113 aa7.06□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Wfdc9Q3UW41 83 aa7.06□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Spry4Q9WTP2 300 aa7.06□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Igkv3-5A0A140T8M6 119 aa7.06□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 GrnP28798 589 aaKnown RBP7.06□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Gm6040Q4QY32 63 aa7.06□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 NpbQ8K4P1 119 aa7.06□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 1700012A03RikQ9DAF1 130 aa7.06□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 StrcQ8VIM6 1809 aa7.06□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Defb18Q30KP5 85 aa7.05□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 9230109A22RikQ8BHE6 111 aa7.05□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Ube2aQ9Z255 152 aa7.05□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Gm8251F6VUT6 1994 aa7.05□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Ighv1-75A0A075B5Y2 117 aa7.05□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Gm10401E9Q3K6 71 aa7.05□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Cfap126Q6P8X9 189 aa7.05□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Spag11Q8K4N2 71 aa7.05□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Zfand3Q497H0 227 aa7.05□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 AW146154Q3TPQ7 468 aa7.04□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Odf3l1Q810P2 275 aa7.04□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Timm17bQ9Z0V7 172 aa7.04□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Brk1Q91VR8 75 aa7.04□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Gm15127B1AVZ5 449 aa7.04□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Hoxb4P10284 250 aa7.04□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Cox7a1P56392 80 aa7.04□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 A230072I06RikQ3UUJ8 172 aa7.04□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Arhgef17Q80U35 2057 aa7.04□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Spink10Q8CAC8 162 aa7.04□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Igkv3-10A0A0G2JGN0 119 aa7.03□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Gm15557A6PWY0 234 aa7.03□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Dopey1Q8BL99 2399 aa7.03□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Usf3B2RUQ2 2221 aa7.03□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Fgfbp3Q1HCM0 245 aa7.03□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Znf672Q99LH4 468 aa7.03□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Mrpl35Q9CQL6 188 aa7.03□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Sdk2Q6V4S5 2176 aa7.03□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 MifP34884 115 aaKnown RBP7.03□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 9130230L23RikQ8CC80 163 aa7.03□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Hivep3A2A884 2348 aa7.03□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Trav7-6A0A075B640 112 aa7.03□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Gm7257D3YX25 99 aa7.03□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Gm10553J3QPF1 123 aa7.03□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Klk9Q32M27 251 aa7.03□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Ank3G5E8K5 1961 aa7.03□□□□□ -1.28
Ccdc47-201ENSMUST00000002043 Snai3Q9QY31 287 aa7.02□□□□□ -1.29
Retrieved 100 of 22,080 RNA–protein pairs in 38.7 ms