RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Ang5Q5GAN1 145 aa10.74□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Gm20499D3Z4G5 72 aa10.74□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 P01786 117 aa10.74□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 BlcapP62951 87 aa10.74□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Tmem213Q08EA8 116 aa10.74□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Gm9936Q8C864 160 aa10.74□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Ube2e2Q91W82 201 aa10.74□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Gm15294V9GXA7 121 aa10.74□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Gm20481G3UXK4 153 aa10.74□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Gm21060J3KMU4 56 aa10.74□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Edn1P22387 202 aa10.74□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 NpyP57774 97 aa10.74□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Taf15Q8BQ46 557 aaKnown RBP10.74□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Q8R092 253 aa10.74□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Cdk2ap2Q9CPY4 127 aa10.74□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Smim10l1A0A087WNQ7 89 aa10.73□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 P01896 185 aa10.73□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Defa-rs2P17534 91 aa10.73□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 7420426K07RikQ3UX66 186 aa10.73□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 P01756 117 aa10.73□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 P01757 117 aa10.73□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 P01794 123 aa10.73□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 P06330 118 aa10.73□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Dopey2Q3UHQ6 2295 aa10.73□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Gm11020F6ZGD5 61 aa10.72□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Reg3gO09049 174 aa10.72□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 CrygcQ61597 174 aa10.72□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 E130116L18RikQ8BMV6 101 aa10.72□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Igkv4-71A0A0G2JEH0 117 aa10.72□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Igkv4-81A0A0G2JEY5 119 aa10.72□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Defa4P28311 92 aa10.72□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Socs3O35718 225 aa10.72□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 BB014433Q8C5R5 389 aa10.72□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 CtrlQ9ER05 264 aa10.72□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Rnf114Q9ET26 229 aa10.72□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Oxld1Q9CR10 201 aa10.72□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Rif1Q6PR54 2419 aaKnown RBP10.71□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Lage3Q9CR70 148 aa10.71□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Smim26Q3V460 107 aa10.71□□□□□ -0.69
Pcdha1-202ENSMUST00000193839 Ighv1-50A0A075B5W1 117 aa10.71□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Shisal2aA2A9G7 189 aa10.71□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Atp5eP56382 52 aa10.71□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Ndufa3Q9CQ91 84 aa10.71□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Bub3Q9WVA3 326 aa10.71□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Hist1h4aP62806 103 aaKnown RBP10.7□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Mfap4Q9D1H9 257 aa10.7□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Pglyrp4Q0VB07 374 aa10.7□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Zmat4Q8BZ94 229 aa10.7□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Klf13Q9JJZ6 289 aa10.7□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 LeprotO89013 131 aa10.7□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 P01748 117 aa10.7□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Gm5941Q497P9 117 aa10.7□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Gm9949Q8C9F4 104 aa10.7□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Gp9O88186 177 aa10.7□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Iglc1A0A0G2JE99 106 aa10.69□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 P01843 105 aa10.69□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Rbx1P62878 108 aa10.69□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Gm10295Q8CCF3 114 aa10.69□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Cdpf1Q8R3A2 119 aa10.69□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Clec5aQ9R007 190 aa10.69□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Trav4d-3A0A075B625 110 aa10.69□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 P01739 132 aa10.69□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 A530064D06RikQ8BNV8 229 aa10.69□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Sfta2E9PXB6 77 aa10.69□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Fam24aQ8CF27 98 aa10.69□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Mrpl55Q9CZ83 127 aa10.69□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Synj2bpQ9D6K5 145 aa10.69□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Ighv1-49A0A0A6YWX2 117 aa10.69□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Lyrm9Q3UN90 78 aa10.69□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Lect2O88803 151 aa10.68□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Pla2g2dQ9WVF6 144 aa10.68□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 P01750 117 aa10.68□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Fam216aQ9DB54 251 aa10.68□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Olfr311Q5NC59 308 aa10.68□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 IgipA0A1B0GR74 53 aa10.68□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Tet1Q3URK3 2007 aaKnown RBP10.67□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Obox8V9GWY9 217 aa10.67□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Cox17P56394 63 aa10.67□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Tmem86bQ497J1 226 aa10.67□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Q9CX25 107 aa10.67□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Heatr5aQ5PRF0 2038 aa10.67□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Fam110dQ80X91 271 aa10.67□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Wnk1P83741 2377 aa10.66□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Ighv1-12A0A0A6YXJ9 117 aa10.66□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Spink1P09036 80 aa10.66□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Gm815Q3UWS2 115 aa10.66□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Prr3Q811B5 190 aaKnown RBP10.66□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 P01738 130 aa10.66□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Sdk1Q3UH53 2193 aa10.66□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Sptbn4E9PX29 2561 aa10.66□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Cd24P24807 76 aa10.66□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Gm10553J3QPF1 123 aa10.66□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Dido1Q8C9B9 2256 aaKnown RBP10.65□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Igkv4-57-1A0A075B5M4 119 aa10.65□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 Ndufa1O35683 70 aa10.65□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 P01837 106 aa10.65□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 OtoglF7A4A7 2325 aa10.65□□□□□ -0.7
Pcdha1-202ENSMUST00000193839 DscamQ9ERC8 2013 aa10.64□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 Runx1Q03347 451 aa10.64□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 Mpv17l2Q8VIK2 200 aa10.64□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 77 ms