RNA–Protein interactions for RNA: ENSMUST00000113051.8

Shroom3-201, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-201ENSMUST00000113051 Klk4Q9Z0M1 255 aa13.04□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Cdpf1Q8R3A2 119 aa13.04□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Ighv12-3A0A075B5T1 117 aa13.04□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Gm20499D3Z4G5 72 aa13.04□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Samd5Q3V1H9 173 aa13.04□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Mustn1Q99JI1 82 aa13.04□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Gm5294J3QP53 216 aa13.03□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Tm2d2Q8R0I4 213 aa13.03□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Znf672Q99LH4 468 aa13.03□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Gtsf1Q9DAN6 167 aa13.03□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Ube2aQ9Z255 152 aa13.03□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Ighv1-12A0A0A6YXJ9 117 aa13.03□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Zfp36l1P23950 338 aa13.03□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Ss18l2Q9D174 77 aa13.03□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Atp5g3P56384 141 aa13.03□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Atp5g1Q9CR84 136 aa13.03□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Nup210lQ9D2F7 1881 aa13.03□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Trav6-6A0A075B603 114 aa13.03□□□□□ -0.32
Shroom3-201ENSMUST00000113051 SelenowP63300 88 aa13.03□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Trav13-2A0A075B649 110 aa13.03□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Cd300eQ8K249 196 aa13.02□□□□□ -0.32
Shroom3-201ENSMUST00000113051 P01753 117 aa13.02□□□□□ -0.33
Shroom3-201ENSMUST00000113051 MsmpB1AWI6 139 aa13.02□□□□□ -0.33
Shroom3-201ENSMUST00000113051 Gm20517G3UVU6 152 aa13.02□□□□□ -0.33
Shroom3-201ENSMUST00000113051 March3Q8BRX9 218 aa13.02□□□□□ -0.33
Shroom3-201ENSMUST00000113051 Rasl10aQ8K5A4 203 aa13.02□□□□□ -0.33
Shroom3-201ENSMUST00000113051 Trav14-3A0A075B607 120 aa13.01□□□□□ -0.33
Shroom3-201ENSMUST00000113051 Mtatp8P03930 67 aa13.01□□□□□ -0.33
Shroom3-201ENSMUST00000113051 9430097D07RikQ8BS47 195 aa13.01□□□□□ -0.33
Shroom3-201ENSMUST00000113051 Tmem14cQ9CQN6 114 aa13.01□□□□□ -0.33
Shroom3-201ENSMUST00000113051 B230359F08RikA0A0B4J1K3 109 aa13.01□□□□□ -0.33
Shroom3-201ENSMUST00000113051 Pcp4P63054 62 aa13.01□□□□□ -0.33
Shroom3-201ENSMUST00000113051 Klk5Q9D140 293 aa13.01□□□□□ -0.33
Shroom3-201ENSMUST00000113051 Ighv1-19A0A0A6YWX0 117 aa13.01□□□□□ -0.33
Shroom3-201ENSMUST00000113051 Ighv2-7A0A075B5Q8 116 aa13□□□□□ -0.33
Shroom3-201ENSMUST00000113051 PscaP57096 123 aa13□□□□□ -0.33
Shroom3-201ENSMUST00000113051 A930003A15RikQ3U552 87 aa13□□□□□ -0.33
Shroom3-201ENSMUST00000113051 Trav13-4-dv7A0A075B6C2 110 aa13□□□□□ -0.33
Shroom3-201ENSMUST00000113051 Gm10518F6UQQ9 182 aa13□□□□□ -0.33
Shroom3-201ENSMUST00000113051 Defb47Q30KN1 79 aa13□□□□□ -0.33
Shroom3-201ENSMUST00000113051 Trav13n-1A0A0G2JEU8 110 aa13□□□□□ -0.33
Shroom3-201ENSMUST00000113051 Inafm2A0A1L1STD6 152 aa12.99□□□□□ -0.33
Shroom3-201ENSMUST00000113051 Mrpl55Q9CZ83 127 aa12.99□□□□□ -0.33
Shroom3-201ENSMUST00000113051 LitafQ9JLJ0 161 aa12.99□□□□□ -0.33
Shroom3-201ENSMUST00000113051 Tet1Q3URK3 2007 aaKnown RBP12.99□□□□□ -0.33
Shroom3-201ENSMUST00000113051 Trav13d-1A0A075B606 110 aa12.99□□□□□ -0.33
Shroom3-201ENSMUST00000113051 Sdk2Q6V4S5 2176 aa12.99□□□□□ -0.33
Shroom3-201ENSMUST00000113051 Gm11733Q8BQP1 125 aa12.99□□□□□ -0.33
Shroom3-201ENSMUST00000113051 Tnfrsf13bQ9ET35 249 aa12.99□□□□□ -0.33
Shroom3-201ENSMUST00000113051 Col6a4A2AX52 2309 aa12.98□□□□□ -0.33
Shroom3-201ENSMUST00000113051 Pom121l2Q5SW25 972 aa12.98□□□□□ -0.33
Shroom3-201ENSMUST00000113051 Ly6g5bQ8K1T4 194 aa12.98□□□□□ -0.33
Shroom3-201ENSMUST00000113051 Defb12Q8K4N3 78 aa12.98□□□□□ -0.33
Shroom3-201ENSMUST00000113051 Ube2v1Q9CZY3 147 aa12.98□□□□□ -0.33
Shroom3-201ENSMUST00000113051 Gm15557A6PWY0 234 aa12.98□□□□□ -0.33
Shroom3-201ENSMUST00000113051 Gm5129F6YHA9 99 aa12.98□□□□□ -0.33
Shroom3-201ENSMUST00000113051 Pcdh15Q99PJ1 1943 aa12.98□□□□□ -0.33
Shroom3-201ENSMUST00000113051 Nlrc5C3VPR6 1915 aa12.98□□□□□ -0.33
Shroom3-201ENSMUST00000113051 Lce6aD3YV94 81 aa12.97□□□□□ -0.33
Shroom3-201ENSMUST00000113051 Lage3Q9CR70 148 aa12.97□□□□□ -0.33
Shroom3-201ENSMUST00000113051 Ighv1-77A0A0G2JGS9 117 aa12.97□□□□□ -0.33
Shroom3-201ENSMUST00000113051 P01756 117 aa12.97□□□□□ -0.33
Shroom3-201ENSMUST00000113051 P01757 117 aa12.97□□□□□ -0.33
Shroom3-201ENSMUST00000113051 Cnot1Q6ZQ08 2375 aaKnown RBP12.97□□□□□ -0.33
Shroom3-201ENSMUST00000113051 Heatr5aQ5PRF0 2038 aa12.97□□□□□ -0.33
Shroom3-201ENSMUST00000113051 Trav13-1A0A075B644 110 aa12.97□□□□□ -0.33
Shroom3-201ENSMUST00000113051 1810032O08RikE9PZV8 113 aa12.97□□□□□ -0.33
Shroom3-201ENSMUST00000113051 FancmQ8BGE5 2021 aa12.97□□□□□ -0.33
Shroom3-201ENSMUST00000113051 Rnase1P00683 149 aa12.97□□□□□ -0.33
Shroom3-201ENSMUST00000113051 9230109A22RikQ8BHE6 111 aa12.96□□□□□ -0.33
Shroom3-201ENSMUST00000113051 Pglyrp1O88593 182 aa12.96□□□□□ -0.33
Shroom3-201ENSMUST00000113051 Mbd6Q3TY92 1003 aa12.96□□□□□ -0.33
Shroom3-201ENSMUST00000113051 Bex1Q9R224 128 aa12.96□□□□□ -0.33
Shroom3-201ENSMUST00000113051 Abca1P41233 2261 aa12.96□□□□□ -0.33
Shroom3-201ENSMUST00000113051 Plxna2P70207 1894 aa12.96□□□□□ -0.33
Shroom3-201ENSMUST00000113051 Camk2n2Q78WH7 79 aa12.96□□□□□ -0.34
Shroom3-201ENSMUST00000113051 Gm10735Q3US96 136 aa12.96□□□□□ -0.34
Shroom3-201ENSMUST00000113051 CstadQ9D245 104 aa12.96□□□□□ -0.34
Shroom3-201ENSMUST00000113051 Esm1Q9QYY7 184 aa12.95□□□□□ -0.34
Shroom3-201ENSMUST00000113051 Them7Q9DCP4 223 aa12.95□□□□□ -0.34
Shroom3-201ENSMUST00000113051 Fxyd1Q9Z239 92 aa12.95□□□□□ -0.34
Shroom3-201ENSMUST00000113051 Rpl39P62892 51 aa12.94□□□□□ -0.34
Shroom3-201ENSMUST00000113051 Klk12B2RVZ0 247 aa12.94□□□□□ -0.34
Shroom3-201ENSMUST00000113051 Cend1Q9JKC6 149 aa12.94□□□□□ -0.34
Shroom3-201ENSMUST00000113051 Znrf2Q71FD5 238 aa12.94□□□□□ -0.34
Shroom3-201ENSMUST00000113051 Slc25a29Q8BL03 306 aa12.94□□□□□ -0.34
Shroom3-201ENSMUST00000113051 B9d2Q3UK10 175 aa12.94□□□□□ -0.34
Shroom3-201ENSMUST00000113051 Tm2d1Q99MB3 208 aa12.94□□□□□ -0.34
Shroom3-201ENSMUST00000113051 PkigO70139 76 aa12.93□□□□□ -0.34
Shroom3-201ENSMUST00000113051 Ang4Q3TMQ6 144 aa12.93□□□□□ -0.34
Shroom3-201ENSMUST00000113051 Ptprz1B9EKR1 2312 aa12.93□□□□□ -0.34
Shroom3-201ENSMUST00000113051 Iglv1A0A075B663 117 aa12.93□□□□□ -0.34
Shroom3-201ENSMUST00000113051 PemtQ61907 199 aa12.93□□□□□ -0.34
Shroom3-201ENSMUST00000113051 Ndufb4Q9CQC7 129 aa12.93□□□□□ -0.34
Shroom3-201ENSMUST00000113051 Nxph4G3X9N5 304 aa12.93□□□□□ -0.34
Shroom3-201ENSMUST00000113051 Gm45213A0A0U1RNZ6 101 aa12.93□□□□□ -0.34
Shroom3-201ENSMUST00000113051 Dopey2Q3UHQ6 2295 aa12.93□□□□□ -0.34
Shroom3-201ENSMUST00000113051 MyofQ69ZN7 2048 aaKnown RBP12.93□□□□□ -0.34
Shroom3-201ENSMUST00000113051 Zcwpw2Q08EN7 125 aa12.93□□□□□ -0.34
Shroom3-201ENSMUST00000113051 Cox7b2Q9D2H1 82 aa12.93□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 42.4 ms