RNA–Protein interactions for RNA: ENSMUST00000060896.4

Col6a6-201, Transcript of Collagen alpha-6(VI) chain, mousemouse

TSL 1 (best) BASIC

Gene Col6a6, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6-201ENSMUST00000060896 Gpr82Q8BZR0 328 aa5.32□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Q9D131 166 aa5.32□□□□□ -1.56
Col6a6-201ENSMUST00000060896 PmvkQ9D1G2 192 aa5.32□□□□□ -1.56
Col6a6-201ENSMUST00000060896 CicQ924A2 2510 aa5.32□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Gm20379A0A087WR34 119 aa5.31□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Esp24A8R0V6 68 aa5.31□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Gm17732E9Q5I2 61 aa5.31□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Defa37K9J724 93 aa5.31□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Mrps12O35680 139 aa5.31□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Rpl35aO55142 110 aa5.31□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Defa5P28312 93 aa5.31□□□□□ -1.56
Col6a6-201ENSMUST00000060896 BC106179Q8C9L1 186 aa5.31□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Tmem97Q8VD00 176 aa5.31□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Tspo2Q9CRZ8 162 aa5.31□□□□□ -1.56
Col6a6-201ENSMUST00000060896 FlncQ8VHX6 2726 aaKnown RBP5.31□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Gm35549A0A0N4SUS7 141 aa5.31□□□□□ -1.56
Col6a6-201ENSMUST00000060896 P01739 132 aa5.31□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Gpx1P11352 201 aa5.31□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Ccl21aP84444 133 aa5.31□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Ccl21bP86792 133 aa5.31□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Ccl21cP86793 133 aa5.31□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Gm5941Q497P9 117 aa5.31□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Defa24Q5G865 93 aa5.31□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Srsf1Q6PDM2 248 aaKnown RBP5.31□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Samd10Q7TST3 202 aa5.31□□□□□ -1.56
Col6a6-201ENSMUST00000060896 MrapQ9D159 127 aa5.31□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Ly86O88188 162 aa5.31□□□□□ -1.56
Col6a6-201ENSMUST00000060896 P01812 117 aa5.31□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Usp24B1AY13 2617 aaKnown RBP5.31□□□□□ -1.56
Col6a6-201ENSMUST00000060896 P01820 115 aa5.31□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Prp2P05143 317 aa5.31□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Snx22Q8C084 192 aa5.31□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Slc25a20Q9Z2Z6 301 aaKnown RBP5.31□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Reg3gO09049 174 aa5.3□□□□□ -1.56
Col6a6-201ENSMUST00000060896 P01748 117 aa5.3□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Htr1dQ61224 374 aa5.3□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Mcrip2Q9CQB2 160 aaKnown RBP5.3□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Q9CX25 107 aa5.3□□□□□ -1.56
Col6a6-201ENSMUST00000060896 OtorQ9JIE3 128 aa5.3□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Gm15294V9GXA7 121 aa5.3□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Gm5089A1L3C8 106 aa5.3□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Gm28038F7BCN9 126 aa5.3□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Sap30O88574 220 aa5.3□□□□□ -1.56
Col6a6-201ENSMUST00000060896 P01750 117 aa5.3□□□□□ -1.56
Col6a6-201ENSMUST00000060896 NpyP57774 97 aa5.3□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Gm94Q3V2D2 93 aa5.3□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Gm5468Q8C3D3 155 aa5.3□□□□□ -1.56
Col6a6-201ENSMUST00000060896 PerpQ9JK95 193 aa5.3□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Ccl24Q9JKC0 119 aa5.3□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Ankrd17Q99NH0 2603 aaKnown RBP5.3□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Igkv2-137A0A0B4J1H6 120 aa5.3□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Brd3osA0A1B0GRB6 84 aa5.3□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Rtl10D3YWW5 146 aa5.3□□□□□ -1.56
Col6a6-201ENSMUST00000060896 P01756 117 aa5.3□□□□□ -1.56
Col6a6-201ENSMUST00000060896 P01757 117 aa5.3□□□□□ -1.56
Col6a6-201ENSMUST00000060896 PolP10400 120 aa5.3□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Sdhaf1Q3U276 118 aa5.3□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Gm26938S4R185 226 aa5.3□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Ighv14-1A0A075B5R4 117 aa5.29□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Srsf2Q62093 221 aaKnown RBP5.29□□□□□ -1.56
Col6a6-201ENSMUST00000060896 4930544G11RikQ9CR99 193 aa5.29□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Znf239P24399 201 aa5.29□□□□□ -1.56
Col6a6-201ENSMUST00000060896 PlaurP35456 327 aa5.29□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Atxn7l1Q9CZ05 146 aa5.29□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Spcs1Q9D958 161 aa5.29□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Ighv3-1A0A075B5S6 116 aa5.29□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Ighv1-64A0A075B5X3 117 aa5.29□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Trav14-2A0A075B694 121 aa5.29□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Ighv1-12A0A0A6YXJ9 117 aa5.29□□□□□ -1.56
Col6a6-201ENSMUST00000060896 H2-DMb1P35737 261 aa5.29□□□□□ -1.56
Col6a6-201ENSMUST00000060896 H1fxQ80ZM5 188 aa5.29□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Anapc13Q8R034 74 aa5.29□□□□□ -1.56
Col6a6-201ENSMUST00000060896 UrahQ9CRB3 118 aa5.29□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Xlr5cQ9JJR2 179 aa5.29□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Gm867A0A1W2P7T4 151 aa5.28□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Gm7075D3Z497 112 aa5.28□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Gm11020F6ZGD5 61 aa5.28□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Sumo2P61957 95 aaKnown RBP5.28□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Olfr312Q7TRZ9 308 aa5.28□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Nhlrc1Q8BR37 401 aa5.28□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Zmat4Q8BZ94 229 aa5.28□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Rbmxl2Q9DAE2 385 aaKnown RBP5.28□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Klf13Q9JJZ6 289 aa5.28□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Rab37Q9JKM7 223 aa5.28□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Hcfc1Q61191 2045 aaKnown RBP5.28□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Kmt2bO08550 2713 aa5.28□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Ighv2-7A0A075B5Q8 116 aa5.28□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Trbv14A0A140T8L9 115 aa5.28□□□□□ -1.56
Col6a6-201ENSMUST00000060896 P01811 117 aa5.28□□□□□ -1.56
Col6a6-201ENSMUST00000060896 CrygbP04344 175 aa5.28□□□□□ -1.56
Col6a6-201ENSMUST00000060896 PlnP61014 52 aa5.28□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Odf3l1Q810P2 275 aa5.28□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Gm2564F6Z9S8 108 aa5.28□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Ccl19O70460 108 aa5.28□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Fhl1P97447 280 aaKnown RBP5.28□□□□□ -1.56
Col6a6-201ENSMUST00000060896 RhohQ9D3G9 191 aa5.28□□□□□ -1.56
Col6a6-201ENSMUST00000060896 Ighv1-50A0A075B5W1 117 aa5.27□□□□□ -1.57
Col6a6-201ENSMUST00000060896 P01747 120 aa5.27□□□□□ -1.57
Col6a6-201ENSMUST00000060896 Ifitm10Q8BR26 201 aa5.27□□□□□ -1.57
Col6a6-201ENSMUST00000060896 Olfr498Q8VEW2 330 aa5.27□□□□□ -1.57
Retrieved 100 of 22,080 RNA–protein pairs in 40.7 ms