RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Olfr312Q7TRZ9 308 aa12.09□□□□□ -0.47
Ckap4-201ENSMUST00000053871 Ly6g5bQ8K1T4 194 aa12.09□□□□□ -0.47
Ckap4-201ENSMUST00000053871 TctaQ8VEA7 122 aa12.09□□□□□ -0.47
Ckap4-201ENSMUST00000053871 Cks1brtQ3UNC9 96 aa12.08□□□□□ -0.48
Ckap4-201ENSMUST00000053871 Srsf1Q6PDM2 248 aaKnown RBP12.08□□□□□ -0.48
Ckap4-201ENSMUST00000053871 SNORCQ9CXL7 121 aa12.08□□□□□ -0.48
Ckap4-201ENSMUST00000053871 Sec11aQ9R0P6 179 aa12.08□□□□□ -0.48
Ckap4-201ENSMUST00000053871 Gm37988J3QM41 62 aa12.08□□□□□ -0.48
Ckap4-201ENSMUST00000053871 Usmg5Q78IK2 58 aa12.07□□□□□ -0.48
Ckap4-201ENSMUST00000053871 Igfn1Q3KNY0 2849 aa12.07□□□□□ -0.48
Ckap4-201ENSMUST00000053871 Sumo2P61957 95 aaKnown RBP12.07□□□□□ -0.48
Ckap4-201ENSMUST00000053871 MdfiP70331 251 aa12.07□□□□□ -0.48
Ckap4-201ENSMUST00000053871 Sdhaf1Q3U276 118 aa12.07□□□□□ -0.48
Ckap4-201ENSMUST00000053871 Spag11Q8K4N2 71 aa12.07□□□□□ -0.48
Ckap4-201ENSMUST00000053871 P06334 169 aa12.07□□□□□ -0.48
Ckap4-201ENSMUST00000053871 Fgf6P21658 208 aa12.07□□□□□ -0.48
Ckap4-201ENSMUST00000053871 Igkv4-74A0A0B4J1I3 119 aa12.06□□□□□ -0.48
Ckap4-201ENSMUST00000053871 Esp3J3QN49 87 aa12.06□□□□□ -0.48
Ckap4-201ENSMUST00000053871 P18527 97 aa12.06□□□□□ -0.48
Ckap4-201ENSMUST00000053871 H2-DMb1P35737 261 aa12.06□□□□□ -0.48
Ckap4-201ENSMUST00000053871 Chd6A3KFM7 2711 aa12.06□□□□□ -0.48
Ckap4-201ENSMUST00000053871 LhbO09108 141 aa12.05□□□□□ -0.48
Ckap4-201ENSMUST00000053871 Psmg4P0C7N9 123 aa12.05□□□□□ -0.48
Ckap4-201ENSMUST00000053871 PerpQ9JK95 193 aa12.05□□□□□ -0.48
Ckap4-201ENSMUST00000053871 MtorQ9JLN9 2549 aa12.05□□□□□ -0.48
Ckap4-201ENSMUST00000053871 Brd3osA0A1B0GRB6 84 aa12.05□□□□□ -0.48
Ckap4-201ENSMUST00000053871 Gm21994F6T2D2 329 aa12.05□□□□□ -0.48
Ckap4-201ENSMUST00000053871 Rbx1P62878 108 aa12.05□□□□□ -0.48
Ckap4-201ENSMUST00000053871 Slc16a4Q8R0M8 500 aa12.05□□□□□ -0.48
Ckap4-201ENSMUST00000053871 A730046J19RikA0A1B0GSN8 89 aa12.05□□□□□ -0.48
Ckap4-201ENSMUST00000053871 Tmem170bP86050 132 aa12.05□□□□□ -0.48
Ckap4-201ENSMUST00000053871 Tmem14cQ9CQN6 114 aa12.05□□□□□ -0.48
Ckap4-201ENSMUST00000053871 LystP97412 3788 aa12.05□□□□□ -0.48
Ckap4-201ENSMUST00000053871 Ighv1-64A0A075B5X3 117 aa12.04□□□□□ -0.48
Ckap4-201ENSMUST00000053871 Gm29666A0A087WQ99 126 aa12.04□□□□□ -0.48
Ckap4-201ENSMUST00000053871 Tmem238lA0A1B0GS74 79 aa12.04□□□□□ -0.48
Ckap4-201ENSMUST00000053871 Ndufa4Q62425 82 aaKnown RBP12.04□□□□□ -0.48
Ckap4-201ENSMUST00000053871 CtrlQ9ER05 264 aa12.04□□□□□ -0.48
Ckap4-201ENSMUST00000053871 Ighv1-50A0A075B5W1 117 aa12.03□□□□□ -0.48
Ckap4-201ENSMUST00000053871 Gm28044L7N1X0 119 aa12.03□□□□□ -0.48
Ckap4-201ENSMUST00000053871 P01726 129 aa12.03□□□□□ -0.48
Ckap4-201ENSMUST00000053871 P06328 117 aa12.03□□□□□ -0.48
Ckap4-201ENSMUST00000053871 Igsf23B2RTN2 239 aa12.03□□□□□ -0.48
Ckap4-201ENSMUST00000053871 Gm7489Q3UT34 171 aa12.03□□□□□ -0.48
Ckap4-201ENSMUST00000053871 Gm94Q3V2D2 93 aa12.03□□□□□ -0.48
Ckap4-201ENSMUST00000053871 Rif1Q6PR54 2419 aaKnown RBP12.03□□□□□ -0.48
Ckap4-201ENSMUST00000053871 Gm45753A0A1C7CYU8 86 aa12.02□□□□□ -0.48
Ckap4-201ENSMUST00000053871 Q9CX63 252 aa12.02□□□□□ -0.48
Ckap4-201ENSMUST00000053871 Gm26920S4R2A5 56 aa12.02□□□□□ -0.48
Ckap4-201ENSMUST00000053871 Umad1E0CX23 159 aa12.02□□□□□ -0.49
Ckap4-201ENSMUST00000053871 Csn3P06796 181 aa12.02□□□□□ -0.49
Ckap4-201ENSMUST00000053871 Psmb11Q8BG41 302 aa12.02□□□□□ -0.49
Ckap4-201ENSMUST00000053871 Ighv1-12A0A0A6YXJ9 117 aa12.01□□□□□ -0.49
Ckap4-201ENSMUST00000053871 Htr1dQ61224 374 aa12.01□□□□□ -0.49
Ckap4-201ENSMUST00000053871 Spcs1Q9D958 161 aa12.01□□□□□ -0.49
Ckap4-201ENSMUST00000053871 Q9DAB9 146 aa12.01□□□□□ -0.49
Ckap4-201ENSMUST00000053871 Shisa9Q9CZN4 424 aa12.01□□□□□ -0.49
Ckap4-201ENSMUST00000053871 Igkv2-137A0A0B4J1H6 120 aa12□□□□□ -0.49
Ckap4-201ENSMUST00000053871 Gm10226O88253 85 aa12□□□□□ -0.49
Ckap4-201ENSMUST00000053871 Mtatp8P03930 67 aa12□□□□□ -0.49
Ckap4-201ENSMUST00000053871 PmvkQ9D1G2 192 aa12□□□□□ -0.49
Ckap4-201ENSMUST00000053871 Rs1Q9Z1L4 224 aa12□□□□□ -0.49
Ckap4-201ENSMUST00000053871 Notch3Q61982 2318 aa12□□□□□ -0.49
Ckap4-201ENSMUST00000053871 TrrapQ80YV3 2565 aaKnown RBP12□□□□□ -0.49
Ckap4-201ENSMUST00000053871 Cited2O35740 269 aa12□□□□□ -0.49
Ckap4-201ENSMUST00000053871 Rpl39P62892 51 aa12□□□□□ -0.49
Ckap4-201ENSMUST00000053871 C1qcQ02105 246 aa12□□□□□ -0.49
Ckap4-201ENSMUST00000053871 Trav2Q5R1I9 109 aa12□□□□□ -0.49
Ckap4-201ENSMUST00000053871 Ccl19O70460 108 aa11.99□□□□□ -0.49
Ckap4-201ENSMUST00000053871 Trav7-2Q5R1I3 112 aa11.99□□□□□ -0.49
Ckap4-201ENSMUST00000053871 Ormdl2Q9CQZ0 153 aa11.99□□□□□ -0.49
Ckap4-201ENSMUST00000053871 HilpdaQ9JLS0 64 aa11.99□□□□□ -0.49
Ckap4-201ENSMUST00000053871 Trav9-2A0A075B647 113 aa11.98□□□□□ -0.49
Ckap4-201ENSMUST00000053871 Trav9-4A0A0B4J1K2 113 aa11.98□□□□□ -0.49
Ckap4-201ENSMUST00000053871 Ndufa1O35683 70 aa11.98□□□□□ -0.49
Ckap4-201ENSMUST00000053871 Wfdc15aQ8BH89 80 aa11.98□□□□□ -0.49
Ckap4-201ENSMUST00000053871 Tmem97Q8VD00 176 aa11.98□□□□□ -0.49
Ckap4-201ENSMUST00000053871 Cyyr1Q8VIH7 165 aa11.98□□□□□ -0.49
Ckap4-201ENSMUST00000053871 Ndufb4Q9CQC7 129 aa11.98□□□□□ -0.49
Ckap4-201ENSMUST00000053871 Gm9242J3QNY1 357 aa11.97□□□□□ -0.49
Ckap4-201ENSMUST00000053871 Mllt11P97783 90 aa11.97□□□□□ -0.49
Ckap4-201ENSMUST00000053871 Samd5Q3V1H9 173 aa11.97□□□□□ -0.49
Ckap4-201ENSMUST00000053871 Fam240aJ3QNP9 97 aa11.97□□□□□ -0.49
Ckap4-201ENSMUST00000053871 Gm5629P06327 117 aa11.97□□□□□ -0.49
Ckap4-201ENSMUST00000053871 Egr2P08152 470 aa11.97□□□□□ -0.49
Ckap4-201ENSMUST00000053871 Gm9913Q8BQQ2 135 aa11.97□□□□□ -0.49
Ckap4-201ENSMUST00000053871 Atp6v0bQ91V37 205 aa11.97□□□□□ -0.49
Ckap4-201ENSMUST00000053871 Mustn1Q99JI1 82 aa11.97□□□□□ -0.49
Ckap4-201ENSMUST00000053871 Ighv2-7A0A075B5Q8 116 aa11.96□□□□□ -0.49
Ckap4-201ENSMUST00000053871 Gm17430F6RSK3 157 aa11.96□□□□□ -0.49
Ckap4-201ENSMUST00000053871 Defb18Q30KP5 85 aa11.96□□□□□ -0.49
Ckap4-201ENSMUST00000053871 Olfr313Q5NC55 308 aa11.96□□□□□ -0.49
Ckap4-201ENSMUST00000053871 Myo18bE9PV66 2605 aa11.96□□□□□ -0.5
Ckap4-201ENSMUST00000053871 Arid1bE9Q4N7 2244 aa11.96□□□□□ -0.5
Ckap4-201ENSMUST00000053871 Ighv1-75A0A075B5Y2 117 aa11.95□□□□□ -0.5
Ckap4-201ENSMUST00000053871 Bak1O08734 209 aa11.95□□□□□ -0.5
Ckap4-201ENSMUST00000053871 SbpP15501 199 aa11.95□□□□□ -0.5
Ckap4-201ENSMUST00000053871 Klk7Q91VE3 249 aa11.95□□□□□ -0.5
Ckap4-201ENSMUST00000053871 Ighv3-3A0A0A6YWL2 116 aa11.95□□□□□ -0.5
Ckap4-201ENSMUST00000053871 Gm44965A0A0N4SVR3 59 aa11.95□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 70 ms