RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 P01812 117 aa9.48□□□□□ -0.89
Rnf4-201ENSMUST00000030992 Srsf12Q8C8K3 266 aa9.48□□□□□ -0.89
Rnf4-201ENSMUST00000030992 Gm5629P06327 117 aa9.47□□□□□ -0.89
Rnf4-201ENSMUST00000030992 Sdhaf1Q3U276 118 aa9.47□□□□□ -0.89
Rnf4-201ENSMUST00000030992 Nbeal1E9PYP2 2688 aa9.47□□□□□ -0.89
Rnf4-201ENSMUST00000030992 Celsr2Q9R0M0 2920 aa9.47□□□□□ -0.89
Rnf4-201ENSMUST00000030992 Armcx4E9PWM3 2356 aa9.47□□□□□ -0.89
Rnf4-201ENSMUST00000030992 Gm17430F6RSK3 157 aa9.47□□□□□ -0.89
Rnf4-201ENSMUST00000030992 Ndufa1O35683 70 aa9.47□□□□□ -0.89
Rnf4-201ENSMUST00000030992 TcraP01849 138 aa9.47□□□□□ -0.89
Rnf4-201ENSMUST00000030992 Cd69P37217 199 aa9.47□□□□□ -0.89
Rnf4-201ENSMUST00000030992 Cd33Q63994 403 aa9.47□□□□□ -0.89
Rnf4-201ENSMUST00000030992 FlncQ8VHX6 2726 aaKnown RBP9.46□□□□□ -0.89
Rnf4-201ENSMUST00000030992 Hsbp1l1B2RXB2 72 aa9.46□□□□□ -0.89
Rnf4-201ENSMUST00000030992 Smim13E9Q942 88 aa9.46□□□□□ -0.89
Rnf4-201ENSMUST00000030992 Olfr313Q5NC55 308 aa9.46□□□□□ -0.89
Rnf4-201ENSMUST00000030992 Fam222aQ6PGH4 453 aa9.46□□□□□ -0.89
Rnf4-201ENSMUST00000030992 Ccl24Q9JKC0 119 aa9.46□□□□□ -0.89
Rnf4-201ENSMUST00000030992 Abca2P41234 2434 aa9.46□□□□□ -0.89
Rnf4-201ENSMUST00000030992 Lgals6O54891 301 aa9.46□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Rpl32P62911 135 aaKnown RBP9.46□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Ighv2-3A0A075B696 115 aa9.45□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Plscr4P58196 326 aa9.45□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Gng7Q61016 68 aa9.45□□□□□ -0.9
Rnf4-201ENSMUST00000030992 G0s2Q61585 103 aa9.45□□□□□ -0.9
Rnf4-201ENSMUST00000030992 AI854703Q8BIN3 203 aa9.45□□□□□ -0.9
Rnf4-201ENSMUST00000030992 P18527 97 aa9.45□□□□□ -0.9
Rnf4-201ENSMUST00000030992 1500011B03RikQ3TTH7 73 aa9.45□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Iah1Q9DB29 249 aa9.45□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Fam216aQ9DB54 251 aa9.45□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Ccl21aP84444 133 aa9.45□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Ccl21bP86792 133 aa9.45□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Ccl21cP86793 133 aa9.45□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Gphb5Q812B2 130 aa9.45□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Gm9913Q8BQQ2 135 aa9.45□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Wfdc21Q8BTE6 63 aa9.45□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Trbv16A0A0B4J1H3 115 aa9.44□□□□□ -0.9
Rnf4-201ENSMUST00000030992 A930009A15RikG3UYI6 118 aa9.44□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Emp2O88662 172 aa9.44□□□□□ -0.9
Rnf4-201ENSMUST00000030992 C1qcQ02105 246 aa9.44□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Ighv2-7A0A075B5Q8 116 aa9.44□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Hbb-bsA8DUK4 147 aa9.44□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Hbb-b1P02088 147 aa9.44□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Ang3P97802 145 aa9.44□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Polr2kQ63871 58 aa9.44□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Ube2e2Q91W82 201 aa9.44□□□□□ -0.9
Rnf4-201ENSMUST00000030992 4930564D02RikQ9D4S4 103 aa9.44□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Usp24B1AY13 2617 aaKnown RBP9.43□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Snrpd3P62320 126 aaKnown RBP9.43□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Lrcol1Q3URS3 161 aa9.43□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Ss18Q62280 418 aa9.43□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Znhit3Q9CQK1 151 aa9.43□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Clec5aQ9R007 190 aa9.43□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Gm20499D3Z4G5 72 aa9.43□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Thy1P01831 162 aa9.43□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Trbv17A0A140T8P8 114 aa9.42□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Egr2P08152 470 aa9.42□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Defa9P50707 93 aa9.42□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Rbx1P62878 108 aa9.42□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Klhdc1Q80YG3 406 aa9.42□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Snx22Q8C084 192 aa9.42□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Vps25Q9CQ80 176 aa9.42□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Chd8Q09XV5 2582 aaKnown RBP9.42□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Rpl36-ps4A0A140T8U4 117 aa9.42□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Pglyrp1O88593 182 aa9.42□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Erg28Q9ERY9 140 aa9.42□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Fxyd7P59648 80 aa9.41□□□□□ -0.9
Rnf4-201ENSMUST00000030992 BC025920Q3US60 128 aa9.41□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Ovol2Q8CIV7 274 aa9.41□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Prss29Q99MS4 279 aa9.41□□□□□ -0.9
Rnf4-201ENSMUST00000030992 PmvkQ9D1G2 192 aa9.41□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Trav9-2A0A075B647 113 aa9.41□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Trav9-4A0A0B4J1K2 113 aa9.41□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Trbv13-1A0A0B4J1P8 112 aa9.41□□□□□ -0.9
Rnf4-201ENSMUST00000030992 A730046J19RikA0A1B0GSN8 89 aa9.41□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Gm26727M0QWT1 121 aa9.41□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Smim1P0C8K7 78 aa9.41□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Foxi1Q922I5 372 aa9.41□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Tal2Q62282 108 aa9.4□□□□□ -0.9
Rnf4-201ENSMUST00000030992 Prr3Q811B5 190 aaKnown RBP9.4□□□□□ -0.9
Rnf4-201ENSMUST00000030992 1810032O08RikE9PZV8 113 aa9.4□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Lyzl4Q9D925 145 aa9.4□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Spcs1Q9D958 161 aa9.4□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Ighv5-9-1A0A0A6YVS4 126 aa9.39□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Gm45213A0A0U1RNZ6 101 aa9.39□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Fhl2O70433 279 aa9.39□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Psmb8P28063 276 aa9.39□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Mustn1Q99JI1 82 aa9.39□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Abca12E9Q876 2595 aa9.39□□□□□ -0.91
Rnf4-201ENSMUST00000030992 P01837 106 aa9.39□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Dynlrb2Q9DAJ5 96 aa9.39□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Rs1Q9Z1L4 224 aa9.39□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Gm17732E9Q5I2 61 aa9.38□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Bak1O08734 209 aa9.38□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Brd3osA0A1B0GRB6 84 aa9.38□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Gm7489Q3UT34 171 aa9.38□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Gm10271F6WY25 52 aa9.38□□□□□ -0.91
Rnf4-201ENSMUST00000030992 8030423J24RikQ9CX45 142 aa9.38□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Gm29289A0A087WPY7 166 aa9.37□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Gm4064A0A087WR82 380 aa9.37□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 104.2 ms