RNA–Protein interactions for RNA: ENSMUST00000021278.13

Ctc1-201, Transcript of CST complex subunit CTC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ctc1, Length 4,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-201ENSMUST00000021278 Igkv4-63A0A0G2JFU6 117 aa7.27□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Ccl6P27784 116 aa7.27□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Psmb8P28063 276 aa7.27□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Phlda3Q9WV95 125 aa7.27□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Ranbp2Q9ERU9 3053 aaKnown RBP7.26□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Igkv4-80A0A075B5L7 116 aa7.26□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Spink8Q09TK9 105 aa7.26□□□□□ -1.25
Ctc1-201ENSMUST00000021278 P01837 106 aa7.26□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Hoxd3P09027 433 aa7.26□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Gm12253Q5NC48 229 aa7.26□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Higd1aQ9JLR9 95 aa7.26□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Wnk1P83741 2377 aa7.26□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Pou2af1Q64693 256 aa7.26□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Gm10118Q8C8J5 116 aa7.26□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Morn5Q9DAI9 170 aa7.26□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Slc25a15Q9WVD5 301 aa7.25□□□□□ -1.25
Ctc1-201ENSMUST00000021278 ArtnQ9Z0L2 224 aa7.25□□□□□ -1.25
Ctc1-201ENSMUST00000021278 AcanQ61282 2132 aaKnown RBP7.25□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Zfp648D3Z0W3 525 aa7.25□□□□□ -1.25
Ctc1-201ENSMUST00000021278 LoxP28301 411 aa7.25□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Taf15Q8BQ46 557 aaKnown RBP7.25□□□□□ -1.25
Ctc1-201ENSMUST00000021278 TrrapQ80YV3 2565 aaKnown RBP7.25□□□□□ -1.25
Ctc1-201ENSMUST00000021278 9430015G10RikA2ASP7 199 aa7.25□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Gm10521E9PZK0 135 aa7.25□□□□□ -1.25
Ctc1-201ENSMUST00000021278 P18527 97 aa7.25□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Hes7Q8BKT2 225 aa7.25□□□□□ -1.25
Ctc1-201ENSMUST00000021278 EppinQ9DA01 134 aa7.25□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Dazap2Q9DCP9 168 aa7.25□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Tln1P26039 2541 aaKnown RBP7.25□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Igkv4-91A0A075B5L2 119 aa7.24□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Ighv4-1A0A075B5R5 116 aa7.24□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Ighv5-12-4A0A0A6YWG4 117 aa7.24□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Ighv1-19A0A0A6YWX0 117 aa7.24□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Trav19A0A0B4J1K4 119 aa7.24□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Ebi3O35228 228 aa7.24□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Sumo2P61957 95 aaKnown RBP7.24□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Mllt11P97783 90 aa7.24□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Znf691Q3TDE8 283 aa7.24□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Ube2d2bQ6ZWY6 147 aa7.24□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Mrpl36Q99N90 102 aa7.24□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Plxna2P70207 1894 aa7.24□□□□□ -1.25
Ctc1-201ENSMUST00000021278 P01756 117 aa7.23□□□□□ -1.25
Ctc1-201ENSMUST00000021278 P01757 117 aa7.23□□□□□ -1.25
Ctc1-201ENSMUST00000021278 P04946 108 aa7.23□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Gm5105Q8C6Y9 112 aa7.23□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Pygo1Q9D0P5 417 aa7.23□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Chchd2Q9D1L0 153 aa7.23□□□□□ -1.25
Ctc1-201ENSMUST00000021278 HampQ9EQ21 83 aa7.23□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Sdk2Q6V4S5 2176 aa7.23□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Gm20730A0A075B5J6 119 aa7.23□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Sh2d1aO88890 126 aa7.23□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Smim1P0C8K7 78 aa7.23□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Gm17334Q8C6U3 126 aa7.23□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Atp5g1Q9CR84 136 aa7.23□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Eml6Q5SQM0 1958 aa7.23□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Ighv1-34A0A075B5V2 117 aa7.23□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Ighv1-52A0A0A6YXC3 117 aa7.23□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Ly6c1P0CW02 131 aa7.23□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Ube2e1P52482 193 aa7.23□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Gm10295Q8CCF3 114 aa7.23□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Col6a4A2AX52 2309 aa7.23□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Ighv3-8A0A075B5T0 131 aa7.23□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Igkv6-20A0A140T8P2 115 aa7.23□□□□□ -1.25
Ctc1-201ENSMUST00000021278 P06329 120 aa7.23□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Rmi2Q3UPE3 149 aa7.23□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Spink12Q9D256 87 aa7.23□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Crip2Q9DCT8 208 aaKnown RBP7.23□□□□□ -1.25
Ctc1-201ENSMUST00000021278 SnurfQ9WU12 71 aa7.23□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Tep1P97499 2629 aa7.23□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Gm10135F6TEE5 83 aa7.22□□□□□ -1.25
Ctc1-201ENSMUST00000021278 OtosQ8R448 89 aa7.22□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Shisal2aA2A9G7 189 aa7.22□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Wipf1Q8K1I7 493 aa7.22□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Prelid3aQ8VE85 172 aa7.22□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Ovol1Q9WTJ2 267 aa7.22□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Trav11A0A0B4J1J9 114 aa7.22□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Ighv1-76A0A0G2JFE9 117 aa7.22□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Amn1B8JKV0 258 aa7.22□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Nav3Q80TN7 2359 aa7.22□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Ighv1-39A0A075B5V5 117 aa7.21□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Igkv4-71A0A0G2JEH0 117 aa7.21□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Trav14-1A0A0G2JF94 121 aa7.21□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Timm17bQ9Z0V7 172 aa7.21□□□□□ -1.25
Ctc1-201ENSMUST00000021278 Igkv4-53A0A0G2JFC6 119 aa7.21□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Gm19935A0A1B0GSF9 52 aa7.21□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Gm26661M0QWV4 156 aa7.21□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Serp2Q6TAW2 65 aa7.21□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Zfhx4Q9JJN2 3550 aa7.21□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Immp1lQ9CQU8 166 aa7.21□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Sdhaf1Q3U276 118 aa7.2□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Defb29Q8BGW9 78 aa7.2□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Igkv6-25A0A140T8N7 115 aa7.2□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Igkv9-123A0A140T8N8 117 aa7.2□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Lce6aD3YV94 81 aa7.2□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Gm28038F7BCN9 126 aa7.2□□□□□ -1.26
Ctc1-201ENSMUST00000021278 PspnO70300 156 aa7.2□□□□□ -1.26
Ctc1-201ENSMUST00000021278 P01812 117 aa7.2□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Gm4861Q8C5A4 106 aa7.2□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Ighv8-11A0A075B5X4 119 aa7.2□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Dad1P61804 113 aa7.2□□□□□ -1.26
Retrieved 100 of 22,080 RNA–protein pairs in 41 ms