RNA–Protein interactions for RNA: ENSMUST00000007584.3

Pcdhac1-201, Transcript of Protocadherin alpha C1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac1, Length 5,419 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1-201ENSMUST00000007584 Gm12830F6XVH0 157 aa9.6□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 P04946 108 aa9.6□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Rpl39P62892 51 aa9.6□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Igkv1-35A0A0G2JDE5 120 aa9.6□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Acyp1P56376 99 aa9.6□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Mrpl35Q9CQL6 188 aa9.59□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 MyofQ69ZN7 2048 aaKnown RBP9.59□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Frem1Q684R7 2191 aa9.59□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Nrxn2E9Q7X7 1710 aa9.59□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Polr2aP08775 1970 aaKnown RBP9.59□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Trav13n-1A0A0G2JEU8 110 aa9.59□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Fgf6P21658 208 aa9.59□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Ndufs5Q99LY9 106 aa9.59□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Myo7bQ99MZ6 2113 aa9.59□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Igkv2-109A0A075B5K6 120 aa9.59□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Gm44965A0A0N4SVR3 59 aa9.59□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Gm2564F6Z9S8 108 aa9.59□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 CenpwQ3URR0 86 aa9.59□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 CadB2RQC6 2225 aa9.58□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 Synj2bpQ9D6K5 145 aa9.58□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 Minos1Q7TNS2 76 aa9.58□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 Ormdl1Q921I0 153 aa9.58□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 Ttc6G3UYY4 1857 aa9.58□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 BtcQ05928 177 aa9.58□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 Col11a2Q64739 1736 aa9.58□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 CrygdP04342 174 aa9.57□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 Wdr38Q9D994 303 aa9.57□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 Trip12G5E870 2025 aaKnown RBP9.57□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 Ighv8-12A0A0G2JDE1 119 aa9.57□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 OdaphJ3QNT8 126 aa9.57□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 Ube2e1P52482 193 aa9.57□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 Fam19a4Q7TPG5 135 aa9.57□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 Gm2916Q9D9B9 127 aa9.57□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 Trav13d-1A0A075B606 110 aa9.57□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 Egr2P08152 470 aa9.57□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 Fstl3Q9EQC7 256 aa9.57□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 Igkv6-15A0A140T8M5 115 aa9.57□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 P01786 117 aa9.57□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 Psmb8P28063 276 aa9.57□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 Cd27P41272 250 aa9.57□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 Trav13n-2A0A0G2JF93 110 aa9.56□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 Q9CQM1 111 aa9.56□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 Trav14-1A0A0G2JF94 121 aa9.56□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 Sox16Q62247 57 aa9.56□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 Ighv1-77A0A0G2JGS9 117 aa9.56□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 Timm17aQ9Z0V8 171 aa9.56□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 RlfA2A7F4 1918 aa9.55□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 Trav4-3A0A0B4J1K1 110 aa9.55□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 Sdk2Q6V4S5 2176 aa9.55□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 Gm17472A0A075B683 117 aa9.55□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 Fam222aQ6PGH4 453 aa9.55□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 Bub3Q9WVA3 326 aa9.55□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 Cox6b1P56391 86 aaKnown RBP9.55□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 Ndufs7Q9DC70 224 aa9.55□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 Tmem210Q9D2F0 147 aa9.54□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 Med13lQ6JPI3 2207 aa9.54□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 Ighv1-64A0A075B5X3 117 aa9.54□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 Triap1Q9D8Z2 76 aa9.54□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 ArtnQ9Z0L2 224 aa9.54□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 CtrlQ9ER05 264 aa9.54□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 Sp5Q9JHX2 398 aa9.54□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 Tpsg1Q9QUL7 311 aa9.54□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 Pgpep1lQ9CWB5 130 aa9.53□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 Gm14137Q8CE97 175 aa9.53□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 9930022D16RikQ8BG27 128 aa9.53□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 Klk12B2RVZ0 247 aa9.53□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 Znf672Q99LH4 468 aa9.53□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 Gm10337F7DEP7 55 aa9.53□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 Gp9O88186 177 aa9.53□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 Fhl4Q8CDC8 279 aa9.52□□□□□ -0.88
Pcdhac1-201ENSMUST00000007584 MsmpB1AWI6 139 aa9.52□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Prh1P05142 261 aa9.52□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Crlf1Q9JM58 425 aa9.52□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Sorl1O88307 2215 aaKnown RBP9.52□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Iglv1A0A075B663 117 aa9.52□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 NynrinQ5DTZ0 1840 aa9.52□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Rbbp6P97868 1790 aaKnown RBP9.52□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 NpwA0A1L1STR8 176 aa9.52□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Zgrf1Q0VGT4 1863 aa9.52□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Ighv1-50A0A075B5W1 117 aa9.51□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Parp4E9PYK3 1969 aa9.51□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Ypel4Q65Z93 127 aa9.51□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Odf3Q920N1 254 aa9.51□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Zfp236S4R299 1847 aa9.51□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Sec16aA2AIX1 2377 aa9.51□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 A730015C16RikQ8C992 119 aa9.51□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 P01649 108 aa9.5□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Gm5941Q497P9 117 aa9.5□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Dock1Q8BUR4 1865 aa9.5□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 SonQ9QX47 2444 aaKnown RBP9.5□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Trav13-2A0A075B649 110 aa9.5□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 P01674 108 aa9.5□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Trav13-1A0A075B644 110 aa9.5□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Ighv2-6A0A075B6A7 116 aa9.5□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Cox8cA6H666 72 aa9.5□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Reg3gO09049 174 aa9.5□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Nav3Q80TN7 2359 aa9.5□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Trav9d-3A0A075B695 113 aa9.5□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Cox17P56394 63 aa9.5□□□□□ -0.89
Pcdhac1-201ENSMUST00000007584 Lypd6Q8BPP5 171 aa9.5□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 17.4 ms